Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0115500 Salix brachista HOM05D007257 ORTHO05D008924 2.3e-51 205.3 104 100.0
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 2.8e-41 171.8 104 84.6
Potri.017G002100 Populus trichocarpa HOM05D007257 ORTHO05D008924 4.2e-37 157.9 104 77.9
Sabra17G0006100 Salix brachista HOM05D007257 ORTHO05D008924 3.9e-27 124.8 99 64.6
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 1.0e-14 83.6 107 51.4
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 6.5e-14 80.9 104 48.1
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 8.5e-14 80.5 105 49.5
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 8.5e-14 80.5 108 45.4
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 8.5e-14 80.5 108 45.4
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 7.2e-13 77.4 117 43.6
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 2.1e-12 75.9 111 44.1
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 3.6e-12 75.1 112 43.8
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 3.6e-12 75.1 103 45.6
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 7.9e-12 73.9 105 43.8
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 7.9e-12 73.9 104 43.3
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 7.9e-12 73.9 104 43.3
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.0e-11 73.6 111 45.9
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.8e-11 72.8 104 42.3
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 3.9e-11 71.6 108 42.6
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 2.5e-10 68.9 111 42.3
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 2.5e-10 68.9 113 39.8
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 7.4e-10 67.4 111 42.3
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 2.2e-09 65.9 105 41.9
Phvul.002G279900 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 2.2e-09 65.9 105 39.0
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 4.8e-09 64.7 110 43.6
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 6.3e-09 64.3 103 41.7
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 6.3e-09 64.3 111 36.9
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 8.2e-09 63.9 78 44.9
TPR.G7792 Trifolium pratense HOM05D007257 ORTHO05D008924 8.2e-09 63.9 103 42.7
CiPaw.02G125200 Carya illinoinensis HOM05D007257 ORTHO05D008924 1.1e-08 63.5 86 45.3
Sc13g0007600 Simmondsia chinensis HOM05D007257 ORTHO05D008924 1.4e-08 63.2 110 36.4
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 3.1e-08 62.0 108 38.9
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 3.1e-08 62.0 116 38.8
Dinv33249 Davidia involucrata HOM05D008933 ORTHO05D011098 4.1e-08 61.6 82 45.1
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 4.1e-08 61.6 103 39.8
Nn7g37449 Nelumbo nucifera HOM05D007257 ORTHO05D008924 4.1e-08 61.6 106 41.5
Sopen12g032450 Solanum pennellii HOM05D007257 ORTHO05D008924 4.1e-08 61.6 111 35.1
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 9.1e-08 60.5 104 35.6
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 1.2e-07 60.1 109 41.3
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 1.2e-07 60.1 107 28.0
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 1.5e-07 59.7 108 37.0
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 2.0e-07 59.3 110 35.5
TAR365G0873 Trochodendron aralioides HOM05D007257 ORTHO05D008924 2.0e-07 59.3 81 44.4
Nn1g09433 Nelumbo nucifera HOM05D007257 ORTHO05D008924 2.6e-07 58.9 108 40.7
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 5.9e-07 57.8 109 37.6
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 5.9e-07 57.8 103 40.8
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 5.9e-07 57.8 109 37.6
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 5.9e-07 57.8 116 37.9
Dinv24749 Davidia involucrata HOM05D007257 ORTHO05D008924 1.0e-06 57.0 96 40.6
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla HOM05D007257 ORTHO05D008924 1.3e-06 56.6 39 66.7
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 2.2e-06 55.8 110 35.5
SGA_v2.0_scaffold12G06221 Striga asiatica HOM05D007257 ORTHO05D008924 3.8e-06 55.1 104 36.5
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 5.0e-06 54.7 106 37.7
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 8.5e-06 53.9 112 34.8


User provided reference genes

Program Settings