Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 1.2e-219 766.1 383 100.0
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.6e-214 749.2 400 95.0
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 8.9e-194 680.2 347 96.8
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.0e-189 666.8 375 86.4
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 6.2e-187 657.5 376 84.8
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 6.8e-186 654.1 375 84.3
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.2e-185 653.3 375 84.8
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 6.4e-184 647.5 378 83.9
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 3.2e-183 645.2 375 83.7
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 1.0e-181 640.2 376 84.3
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 2.3e-181 639.0 344 89.8
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 2.3e-181 639.0 359 86.4
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 5.1e-181 637.9 369 84.3
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 9.6e-180 633.6 374 81.3
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 1.6e-179 632.9 359 85.0
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 4.7e-179 631.3 363 83.7
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.1e-178 630.2 371 82.7
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 1.8e-178 629.4 345 87.8
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 6.8e-178 627.5 378 80.4
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 1.2e-177 626.7 374 81.3
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 3.4e-177 625.2 375 81.3
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 3.4e-177 625.2 347 87.6
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 3.4e-177 625.2 377 79.8
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.3e-176 623.2 378 79.6
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.3e-176 623.2 378 79.6
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 1.7e-176 622.9 379 80.5
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 2.2e-176 622.5 374 79.9
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 2.2e-176 622.5 374 80.7
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 2.9e-176 622.1 380 81.1
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 4.9e-176 621.3 343 87.2
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 6.4e-176 620.9 347 85.9
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 3.2e-175 618.6 377 80.1
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 5.4e-175 617.8 352 84.1
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 7.1e-175 617.5 343 86.6
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 7.1e-175 617.5 363 82.4
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 9.3e-175 617.1 383 79.4
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 9.3e-175 617.1 379 80.5
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 9.3e-175 617.1 375 79.2
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 9.3e-175 617.1 343 86.3
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 1.2e-174 616.7 383 80.4
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 1.6e-174 616.3 375 79.5
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 2.1e-174 615.9 377 80.1
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 4.6e-174 614.8 352 83.5
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 7.8e-174 614.0 383 78.1
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 1.0e-173 613.6 383 79.4
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 1.3e-173 613.2 387 78.0
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 1.3e-173 613.2 375 77.1
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 1.7e-173 612.8 358 83.8
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 2.3e-173 612.5 380 76.8
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 3.0e-173 612.1 343 85.1
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 3.9e-173 611.7 344 84.3
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 8.7e-173 610.5 378 77.2
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 1.5e-172 609.8 365 78.9
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 4.3e-172 608.2 378 76.7
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 5.6e-172 607.8 374 78.1
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 7.3e-172 607.4 346 81.2
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 7.3e-172 607.4 382 77.5
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 9.6e-172 607.1 377 78.0
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 2.8e-171 605.5 365 78.9
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 3.6e-171 605.1 349 84.5
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 3.6e-171 605.1 343 84.0
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 6.2e-171 604.4 347 82.1
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.1e-170 603.6 370 78.9
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 2.4e-170 602.4 376 76.9
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 5.3e-170 601.3 369 78.3
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 9.0e-170 600.5 377 75.6
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 1.2e-169 600.1 347 82.1
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 1.5e-169 599.7 343 84.0
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 2.6e-169 599.0 346 82.4
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.6e-169 599.0 342 83.6
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 2.6e-169 599.0 346 82.7
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 4.9e-168 594.7 374 75.1
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 6.4e-168 594.3 344 80.8
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 8.4e-168 594.0 344 81.1
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.4e-167 593.2 345 81.4
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.4e-167 592.4 342 82.5
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 2.4e-167 592.4 347 81.6
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 4.2e-167 591.7 344 81.7
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 5.4e-167 591.3 342 81.6
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 7.1e-167 590.9 369 77.8
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 9.3e-167 590.5 379 76.0
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.2e-166 590.1 342 82.2
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 1.6e-166 589.7 391 75.7
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 2.3e-165 585.9 348 80.2
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 3.0e-165 585.5 342 80.4
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 3.0e-165 585.5 342 80.7
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 6.6e-165 584.3 340 81.5
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 8.7e-165 583.9 342 81.9
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.1e-164 583.6 409 70.4
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 9.6e-164 580.5 343 81.3
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 1.3e-163 580.1 362 78.2
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 2.1e-163 579.3 342 80.7
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 1.1e-162 577.0 372 77.2
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 1.4e-162 576.6 358 77.7
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 5.8e-161 571.2 344 80.8
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 2.4e-159 565.8 463 62.6
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 2.1e-158 562.8 346 77.7
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 5.1e-157 558.1 343 78.1
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 1.5e-156 556.6 358 76.8
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 6.2e-155 551.2 481 59.9
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 2.4e-154 549.3 363 73.8
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 1.1e-151 540.4 354 76.0
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 1.9e-151 539.7 347 73.5
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 8.2e-147 524.2 346 73.1
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 6.9e-146 521.2 353 74.5
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 6.9e-146 521.2 343 72.0
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 2.0e-145 519.6 305 81.3
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 1.1e-140 503.8 339 70.5
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 1.3e-139 500.4 271 89.7
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 6.9e-130 468.0 377 64.2
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.2e-126 457.2 407 61.2
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.2e-126 457.2 329 65.3
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.0e-125 454.1 259 82.2
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.8e-125 453.4 255 82.7
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 3.8e-120 435.6 339 62.8
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.2e-118 430.6 315 69.2
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 2.1e-118 429.9 315 68.9
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 9.7e-116 421.0 232 84.5
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 2.1e-110 403.3 228 86.8
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 8.0e-110 401.4 365 58.9
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 3.0e-109 399.4 345 56.5
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 7.7e-105 384.8 360 59.2
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 2.7e-102 376.3 245 73.9
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 4.4e-100 369.0 218 83.5
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 1.8e-98 363.6 356 53.1
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 1.0e-96 357.8 344 52.9
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 2.9e-91 339.7 254 69.3
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 1.2e-86 324.3 190 83.2
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 1.3e-80 304.3 222 70.7
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 1.5e-76 290.8 176 77.3
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 3.0e-64 250.0 155 77.4
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 2.6e-60 236.9 172 70.9
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.7e-51 207.6 118 79.7
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 1.4e-50 204.5 345 38.3
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 2.4e-50 203.8 118 78.0
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 1.3e-40 171.4 276 42.8
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 1.8e-40 171.0 94 85.1
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 2.3e-40 170.6 99 84.8
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.2e-36 158.3 357 33.1
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 3.0e-24 117.1 81 75.3
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.8e-22 110.5 171 41.5
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 6.3e-22 109.4 99 55.6
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 3.1e-21 107.1 255 32.9
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 7.2e-18 95.9 85 56.5
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 1.5e-12 78.2 45 80.0
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 7.7e-12 75.9 42 76.2


User provided reference genes

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