Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.1e-167 592.4 329 100.0
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 1.4e-134 483.4 328 84.8
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 2.0e-117 426.4 325 72.6
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 7.3e-112 407.9 319 71.2
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 9.6e-112 407.5 325 71.1
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.2e-111 407.1 322 70.8
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 1.2e-111 407.1 320 71.9
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.4e-110 403.7 328 70.4
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 4.0e-110 402.1 325 68.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 9.0e-110 401.0 328 69.8
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.5e-109 400.2 325 68.0
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 2.6e-109 399.4 324 69.1
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.6e-109 399.4 328 69.2
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.1e-107 394.0 318 70.1
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.9e-107 393.3 321 67.6
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 2.4e-107 392.9 329 69.9
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 2.4e-107 392.9 318 69.5
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 5.4e-107 391.7 329 68.7
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 4.6e-106 388.7 324 63.6
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.0e-105 387.5 319 69.6
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.3e-105 386.3 331 68.0
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 6.6e-105 384.8 319 69.3
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.3e-104 382.5 319 69.0
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 4.3e-104 382.1 326 68.1
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 6.2e-103 378.3 327 61.5
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 2.4e-102 376.3 320 68.4
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.3e-102 375.2 322 66.8
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 2.0e-101 373.2 324 61.4
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 2.6e-101 372.9 324 63.3
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 2.6e-101 372.9 322 67.1
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 4.5e-101 372.1 322 64.6
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 4.5e-101 372.1 322 66.8
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 2.9e-100 369.4 327 66.7
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 3.2e-99 365.9 322 65.8
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 3.2e-99 365.9 327 65.4
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 4.2e-99 365.5 324 63.3
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 9.3e-99 364.4 325 65.5
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 9.3e-99 364.4 324 65.4
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 1.2e-98 364.0 321 66.4
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.1e-98 363.2 336 60.7
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 7.9e-98 361.3 322 65.8
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 1.0e-97 360.9 328 60.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.3e-97 360.5 324 65.4
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.3e-97 360.5 320 66.9
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.3e-97 360.5 324 63.9
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 6.7e-97 358.2 328 65.5
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 8.7e-97 357.8 329 63.2
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 8.7e-97 357.8 330 64.8
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 8.7e-97 357.8 330 63.6
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.9e-96 356.7 330 64.2
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 3.3e-96 355.9 323 63.5
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 5.6e-96 355.1 321 62.6
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 7.4e-96 354.8 321 63.9
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 3.7e-95 352.4 325 64.3
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 6.2e-95 351.7 325 65.8
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 8.1e-95 351.3 326 62.0
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 8.1e-95 351.3 326 62.0
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.1e-94 350.9 318 65.7
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 1.1e-94 350.9 337 59.1
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.4e-94 350.5 328 63.4
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 4.0e-94 349.0 361 52.4
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.2e-93 347.4 346 54.9
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.6e-93 346.3 327 59.3
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 5.8e-93 345.1 322 63.4
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 7.6e-93 344.7 339 52.2
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.3e-92 344.0 326 62.3
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.3e-92 344.0 322 60.2
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.1e-91 340.9 323 62.2
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 2.1e-90 336.7 326 60.4
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 3.5e-90 335.9 326 61.3
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 4.6e-90 335.5 350 53.1
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.0e-89 334.3 326 60.7
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.3e-89 334.0 323 61.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 2.3e-89 333.2 320 63.4
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 6.7e-89 331.6 321 58.6
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.5e-88 330.5 321 62.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.5e-88 330.5 324 59.6
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.9e-88 330.1 326 61.7
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 5.6e-88 328.6 316 63.6
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.1e-86 324.3 316 62.3
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 4.5e-85 318.9 323 59.4
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.2e-84 316.6 321 59.8
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 8.4e-84 314.7 300 65.7
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 8.4e-84 314.7 323 61.0
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 3.2e-83 312.8 323 59.1
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 3.2e-83 312.8 322 59.6
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 7.1e-83 311.6 323 59.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 7.1e-83 311.6 323 59.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 3.5e-82 309.3 339 54.3
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 3.5e-82 309.3 321 56.4
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.6e-79 300.4 326 52.5
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.0e-76 291.2 335 47.5
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 9.4e-75 284.6 283 61.1
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.7e-71 272.7 201 63.7
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 8.2e-71 271.6 321 53.3
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.5e-69 267.3 199 62.3
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.0e-69 266.9 314 52.5
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 1.7e-68 263.8 170 70.0
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.1e-67 261.2 193 63.2
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 3.9e-65 252.7 200 57.5
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 6.7e-65 251.9 201 60.7
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.4e-64 249.2 168 69.6
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 4.4e-64 249.2 252 50.8
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.3e-62 242.3 201 59.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 5.5e-59 232.3 167 66.5
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 1.0e-57 228.0 323 46.7
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 2.3e-57 226.9 329 41.0
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 3.0e-57 226.5 323 48.0
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 5.3e-54 215.7 201 52.2
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 5.9e-53 212.2 226 46.9
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.0e-49 201.4 172 57.6
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 1.6e-45 187.6 205 46.8
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.6e-42 176.4 184 49.5
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 4.0e-33 146.4 252 33.3
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 2.6e-32 143.7 336 39.0
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 3.4e-32 143.3 210 51.9
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.3e-28 131.3 97 64.9
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.1e-27 128.3 97 59.8
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 6.1e-26 122.5 253 45.1
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.4e-25 121.3 172 37.2
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.8e-25 120.9 70 75.7
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 3.1e-25 120.2 78 70.5
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.1e-22 111.7 350 28.9
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.6e-21 107.8 73 67.1
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 2.1e-18 97.4 96 49.0
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 3.7e-15 86.7 62 61.3
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 8.3e-15 85.5 128 40.6
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.0e-14 82.4 54 72.2
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.3e-12 78.2 48 72.9
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 2.6e-08 63.9 183 30.6
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.5e-08 62.4 83 47.0
PRCOL_00002257 Prasinoderma coloniale HOM05D005795 ORTHO05D007200 1.3e-07 61.6 302 29.8
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 4.9e-07 59.7 27 85.2
Rhsim05G0171500 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.4e-06 58.2 46 58.7


User provided reference genes

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