Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0101600 Salix brachista HOM05D000072 ORTHO05D000026 4.2e-130 468.0 232 100.0
Potri.007G126100 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.5e-34 150.6 85 84.7
Potri.007G125800 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.3e-34 149.4 85 83.5
Potri.007G125000 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.6e-33 147.1 85 82.4
Potri.007G125200 Populus trichocarpa HOM05D000072 ORTHO05D000026 8.2e-33 144.8 85 80.0
Sabra07G0101400 Salix brachista HOM05D000072 ORTHO05D000026 4.5e-31 139.0 85 76.5
Sabra07G0102100 Salix brachista HOM05D000072 ORTHO05D000026 3.8e-30 136.0 90 71.1
Sabra07G0100900 Salix brachista HOM05D010229 ORTHO05D012533 4.9e-30 135.6 88 72.7
Sabra07G0101900 Salix brachista HOM05D000072 ORTHO05D000026 4.9e-30 135.6 85 75.3
Sabra07G0101500 Salix brachista HOM05D000072 ORTHO05D000026 8.4e-30 134.8 93 69.9
Sabra07G0101000 Salix brachista HOM05D005069 ORTHO05D006024 7.1e-29 131.7 87 74.7
Sabra07G0101200 Salix brachista HOM05D000072 ORTHO05D000026 2.1e-28 130.2 85 71.8
Potri.007G125450 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.0e-27 127.9 85 72.9
Sabra11G0062400 Salix brachista HOM05D000003 ORTHO05D000283 1.4e-19 100.9 103 57.3
Sabra17G0021500 Salix brachista HOM05D000072 ORTHO05D000026 1.3e-17 94.4 88 56.8
Sabra17G0022400 Salix brachista HOM05D000072 ORTHO05D000026 3.7e-17 92.8 85 57.6
Manes.04G046101 Manihot esculenta HOM05D000072 ORTHO05D000026 2.4e-16 90.1 85 54.1
Manes.04G045000 Manihot esculenta HOM05D000072 ORTHO05D000026 3.1e-16 89.7 85 54.1
Manes.04G046100 Manihot esculenta HOM05D000072 ORTHO05D000026 3.1e-16 89.7 85 54.1
Manes.04G046300 Manihot esculenta HOM05D000072 ORTHO05D000026 4.1e-16 89.4 85 54.1
Manes.04G045516 Manihot esculenta HOM05D000072 ORTHO05D000026 2.0e-15 87.0 85 52.9
Manes.04G045401 Manihot esculenta HOM05D000072 ORTHO05D000026 4.5e-15 85.9 85 52.9
Manes.04G046700 Manihot esculenta HOM05D000072 ORTHO05D000026 4.5e-15 85.9 84 53.6
Prupe.2G047500 Prunus persica HOM05D000072 ORTHO05D000026 4.5e-15 85.9 82 46.3
MD02G1249300 Malus domestica HOM05D000072 ORTHO05D000026 1.1e-13 81.3 84 48.8
Manes.11G116800 Manihot esculenta HOM05D000072 ORTHO05D000026 1.1e-13 81.3 88 48.9
Manes.14G007108 Manihot esculenta HOM05D000072 ORTHO05D000026 3.2e-13 79.7 84 50.0
Oeu060619.2 Olea europaea HOM05D000072 ORTHO05D000026 4.2e-13 79.3 90 42.2
Sabra18G0066300 Salix brachista HOM05D000003 ORTHO05D000007 4.2e-13 79.3 38 100.0
QL09p009971 Quercus lobata HOM05D000072 ORTHO05D000026 9.4e-13 78.2 88 44.3
Sabra17G0021900 Salix brachista HOM05D000072 ORTHO05D000026 9.4e-13 78.2 85 51.8
Prupe.2G048700 Prunus persica HOM05D000072 ORTHO05D000026 1.2e-12 77.8 90 44.4
TAR375G0126 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.6e-12 77.4 82 42.7
Lj5C554T7 Lonicera japonica HOM05D000072 ORTHO05D000026 2.1e-12 77.0 91 48.4
MD02G1273500 Malus domestica HOM05D000072 ORTHO05D000026 3.6e-12 76.3 84 46.4
Potri.015G018600 Populus trichocarpa HOM05D000072 ORTHO05D000026 6.1e-12 75.5 85 47.1
QL09p009834 Quercus lobata HOM05D000072 ORTHO05D000026 6.1e-12 75.5 86 47.7
QL09p010030 Quercus lobata HOM05D000072 ORTHO05D000026 6.1e-12 75.5 87 48.3
MD02G1233600 Malus domestica HOM05D000072 ORTHO05D000026 1.0e-11 74.7 83 47.0
MD07G1070000 Malus domestica HOM05D000072 ORTHO05D000026 1.0e-11 74.7 83 47.0
MD07G1070400 Malus domestica HOM05D000072 ORTHO05D000026 1.8e-11 73.9 83 44.6
QL09p010111 Quercus lobata HOM05D000072 ORTHO05D000026 1.8e-11 73.9 89 47.2
TAR629G0877 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.8e-11 73.9 82 46.3
Prupe.2G087100 Prunus persica HOM05D000072 ORTHO05D000026 2.3e-11 73.6 82 45.1
Sabra18G0006200 Salix brachista HOM05D000003 ORTHO05D000007 2.3e-11 73.6 52 71.2
Sabra18G0008200 Salix brachista HOM05D000003 ORTHO05D000007 2.3e-11 73.6 52 71.2
Sabra15G0014000 Salix brachista HOM05D000072 ORTHO05D000026 3.0e-11 73.2 88 44.3
Manes.11G116600 Manihot esculenta HOM05D000072 ORTHO05D000026 3.9e-11 72.8 88 42.0
TAR629G2854 Trochodendron aralioides HOM05D000072 ORTHO05D000026 3.9e-11 72.8 93 38.7
TAR629G1556 Trochodendron aralioides HOM05D000072 ORTHO05D000026 5.1e-11 72.4 80 43.8
Sabra11G0094500 Salix brachista HOM05D000003 ORTHO05D000283 6.7e-11 72.0 52 71.2
Sabra11G0094800 Salix brachista HOM05D000054 ORTHO05D000283 6.7e-11 72.0 52 71.2
QL09p009750 Quercus lobata HOM05D000072 ORTHO05D000026 8.8e-11 71.6 87 46.0
QL09p009937 Quercus lobata HOM05D000072 ORTHO05D000026 8.8e-11 71.6 86 45.3
MD07G1070700 Malus domestica HOM05D000072 ORTHO05D000026 1.5e-10 70.9 82 47.6
Prupe.2G087800 Prunus persica HOM05D000072 ORTHO05D000026 1.5e-10 70.9 83 43.4
FvH4_7g06010 Fragaria vesca HOM05D000072 ORTHO05D000026 2.0e-10 70.5 91 40.7
Prupe.2G088100 Prunus persica HOM05D000072 ORTHO05D000026 2.6e-10 70.1 80 47.5
Nitab4.5_0000825g0100 Nicotiana tabacum HOM05D000072 ORTHO05D000026 3.3e-10 69.7 83 44.6
MD02G1249700 Malus domestica HOM05D000072 ORTHO05D000026 4.4e-10 69.3 82 46.3
MD02G1250200 Malus domestica HOM05D000072 ORTHO05D000026 4.4e-10 69.3 89 46.1
QL12p039529 Quercus lobata HOM05D000072 ORTHO05D000026 4.4e-10 69.3 92 43.5
QL09p010161 Quercus lobata HOM05D000072 ORTHO05D000026 7.4e-10 68.6 87 46.0
CANSAT21G0028 Cannabis sativa HOM05D000072 ORTHO05D000026 1.3e-09 67.8 125 38.4
Prupe.2G103300 Prunus persica HOM05D000072 ORTHO05D000026 1.3e-09 67.8 108 37.0
FAN03G2173 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.2e-09 67.0 91 39.6
RcHm_v2.0_Chr1g0328281 Rosa chinensis HOM05D000072 ORTHO05D000026 2.2e-09 67.0 90 44.4
MD02G1274000 Malus domestica HOM05D000072 ORTHO05D000026 3.7e-09 66.2 82 40.2
Thecc.03G195000 Theobroma cacao HOM05D000072 ORTHO05D000026 3.7e-09 66.2 88 45.5
TAR629G3031 Trochodendron aralioides HOM05D000072 ORTHO05D000026 4.8e-09 65.9 81 39.5
FAN03G3012 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.3e-09 65.5 85 38.8
Manes.06G158900 Manihot esculenta HOM05D000072 ORTHO05D000026 6.3e-09 65.5 92 37.0
RcHm_v2.0_Chr1g0328501 Rosa chinensis HOM05D000072 ORTHO05D000026 6.3e-09 65.5 90 43.3
FvH4_7g04150 Fragaria vesca HOM05D000072 ORTHO05D000026 8.2e-09 65.1 88 43.2
Cfa021379 Carpinus fangiana HOM05D000072 ORTHO05D000026 1.1e-08 64.7 83 43.4
RcHm_v2.0_Chr1g0333351 Rosa chinensis HOM05D000072 ORTHO05D000026 1.1e-08 64.7 91 37.4
FAN12G0155 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.4e-08 64.3 93 37.6
Manes.04G046616 Manihot esculenta HOM05D000072 ORTHO05D000026 1.4e-08 64.3 97 37.1
Manes.04G046736 Manihot esculenta HOM05D000072 ORTHO05D000026 1.4e-08 64.3 97 37.1
RcHm_v2.0_Chr1g0333481 Rosa chinensis HOM05D000072 ORTHO05D000026 1.4e-08 64.3 90 40.0
FvH4_4g34450 Fragaria vesca HOM05D000072 ORTHO05D000026 1.8e-08 63.9 90 35.6
FvH4_7g04170 Fragaria vesca HOM05D000072 ORTHO05D000026 1.8e-08 63.9 82 43.9
Nitab4.5_0005600g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.8e-08 63.9 85 43.5
RcHm_v2.0_Chr1g0333331 Rosa chinensis HOM05D000072 ORTHO05D000026 1.8e-08 63.9 91 37.4
FAN10G2588 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.4e-08 63.5 83 38.6
Potri.017G009500 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.4e-08 63.5 101 36.6
MD02G1247300 Malus domestica HOM05D000072 ORTHO05D000026 3.1e-08 63.2 85 41.2
FvH4_7g04160 Fragaria vesca HOM05D000072 ORTHO05D000026 4.1e-08 62.8 100 40.0
Manes.11G117300 Manihot esculenta HOM05D000072 ORTHO05D000026 4.1e-08 62.8 103 41.7
TWI75G0666 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 4.1e-08 62.8 87 37.9
Cpa.g.sc60.89 Carica papaya HOM05D000072 ORTHO05D000026 5.3e-08 62.4 86 43.0
Dinv05653 Davidia involucrata HOM05D000072 ORTHO05D000026 5.3e-08 62.4 91 42.9
RcHm_v2.0_Chr1g0328371 Rosa chinensis HOM05D000072 ORTHO05D000026 5.3e-08 62.4 87 44.8
RcHm_v2.0_Chr1g0328591 Rosa chinensis HOM05D000072 ORTHO05D000026 5.3e-08 62.4 86 43.0
FvH4_1g03330 Fragaria vesca HOM05D000072 ORTHO05D000026 7.0e-08 62.0 83 37.3
Psat6g038800 Pisum sativum HOM05D000072 ORTHO05D000026 7.0e-08 62.0 85 40.0
TWI18G0005 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 7.0e-08 62.0 89 33.7
FAN07G0463 Fragaria x ananassa HOM05D000072 ORTHO05D000026 9.1e-08 61.6 85 35.3
FAN10G3149 Fragaria x ananassa HOM05D000072 ORTHO05D000026 9.1e-08 61.6 83 39.8
Manes.11G117100 Manihot esculenta HOM05D000072 ORTHO05D000026 9.1e-08 61.6 103 40.8
Medtr1g028280 Medicago truncatula HOM05D000072 ORTHO05D000026 9.1e-08 61.6 86 37.2
COL.COLO4_06423 Corchorus olitorius HOM05D000072 ORTHO05D000026 1.2e-07 61.2 92 39.1
FAN03G3445 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.2e-07 61.2 83 37.3
FAN03G2036 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.5e-07 60.8 87 43.7
FAN22G1936 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.0e-07 60.5 91 36.3
Manes.04G075400 Manihot esculenta HOM05D000072 ORTHO05D000026 2.0e-07 60.5 88 38.6
RcHm_v2.0_Chr1g0328221 Rosa chinensis HOM05D000072 ORTHO05D000026 2.0e-07 60.5 83 42.2
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.6e-07 60.1 79 43.0
MD02G1246700 Malus domestica HOM05D000072 ORTHO05D000026 2.6e-07 60.1 89 37.1
Manes.04G045353 Manihot esculenta HOM05D000072 ORTHO05D000026 2.6e-07 60.1 97 36.1
TAR629G2571 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.6e-07 60.1 83 36.1
MSTRG.8670 Avicennia marina HOM05D000072 ORTHO05D000026 3.4e-07 59.7 86 39.5
FAN19G1949 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.4e-07 59.7 83 36.1
Haze_10143 Corylus avellana HOM05D000072 ORTHO05D000026 4.5e-07 59.3 85 38.8
FvH4_7g20630 Fragaria vesca HOM05D000072 ORTHO05D000026 4.5e-07 59.3 83 37.3
QL01p008121 Quercus lobata HOM05D000072 ORTHO05D000026 5.9e-07 58.9 85 38.8
MD02G1246200 Malus domestica HOM05D000072 ORTHO05D000026 7.7e-07 58.5 89 36.0
Prupe.2G103900 Prunus persica HOM05D000072 ORTHO05D000026 7.7e-07 58.5 122 33.6
Thecc.01G396600 Theobroma cacao HOM05D000072 ORTHO05D000026 7.7e-07 58.5 88 33.0
TPR.G33344 Trifolium pratense HOM05D000072 ORTHO05D000026 7.7e-07 58.5 88 37.5
Dinv05646 Davidia involucrata HOM05D000072 ORTHO05D000026 1.0e-06 58.2 86 43.0
FAN05G5605 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.0e-06 58.2 85 37.6
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.0e-06 58.2 89 41.6
PGSC0003DMG400030291 Solanum tuberosum HOM05D000072 ORTHO05D000026 1.0e-06 58.2 87 36.8
CANSAT21G0703 Cannabis sativa HOM05D000072 ORTHO05D000026 1.3e-06 57.8 99 35.4
arahy.Tifrunner.gnm1.ann1.03NGAM Arachis hypogaea HOM05D000072 ORTHO05D000026 1.7e-06 57.4 87 36.8
arahy.Tifrunner.gnm1.ann1.QYD1P6 Arachis hypogaea HOM05D000072 ORTHO05D000026 1.7e-06 57.4 87 36.8
SalBow4G1917 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.7e-06 57.4 94 37.2
Cfa016395 Carpinus fangiana HOM05D000072 ORTHO05D000026 2.2e-06 57.0 90 35.6
Haze_10146 Corylus avellana HOM05D000072 ORTHO05D000026 2.2e-06 57.0 85 34.1
FvH4_6g28430 Fragaria vesca HOM05D000072 ORTHO05D000026 2.2e-06 57.0 85 37.6
Prupe.2G087500 Prunus persica HOM05D000072 ORTHO05D000026 2.2e-06 57.0 54 50.0
RcHm_v2.0_Chr1g0333571 Rosa chinensis HOM05D000072 ORTHO05D000026 2.2e-06 57.0 90 37.8
Actinidia34207 Actinidia chinensis HOM05D000072 ORTHO05D000026 2.9e-06 56.6 89 34.8
CANSAT21G1543 Cannabis sativa HOM05D000072 ORTHO05D000026 2.9e-06 56.6 86 40.7
Eucgr.K00503 Eucalyptus grandis HOM05D000072 ORTHO05D000026 2.9e-06 56.6 90 35.6
FAN14G0319 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.9e-06 56.6 115 30.4
Potri.017G008901 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.9e-06 56.6 83 38.6
Rhsim06G0111300 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.9e-06 56.6 102 35.3
SalBow2G2325 Salvia bowleyana HOM05D000072 ORTHO05D000026 2.9e-06 56.6 82 35.4
TWI75G1532 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 2.9e-06 56.6 85 36.5
CiPaw.05G254700 Carya illinoinensis HOM05D000072 ORTHO05D000026 3.8e-06 56.2 108 34.3
SalBow4G0643 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.8e-06 56.2 83 41.0
CSS0038049 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 5.0e-06 55.8 91 33.0
Nitab4.5_0026540g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 5.0e-06 55.8 87 44.8
QL09p009890 Quercus lobata HOM05D000072 ORTHO05D000026 5.0e-06 55.8 85 40.0
TWI63G1471 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 5.0e-06 55.8 84 33.3
Cc00_g00630 Coffea canephora HOM05D000072 ORTHO05D000026 6.5e-06 55.5 90 36.7
FAN17G2891 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.5e-06 55.5 85 36.5
Nitab4.5_0001747g0090 Nicotiana tabacum HOM05D000072 ORTHO05D000026 6.5e-06 55.5 89 39.3
SalBow1G2310 Salvia bowleyana HOM05D000072 ORTHO05D000026 6.5e-06 55.5 96 37.5
SalBow4G0897 Salvia bowleyana HOM05D000072 ORTHO05D000026 6.5e-06 55.5 96 37.5
SalBow4G1194 Salvia bowleyana HOM05D000072 ORTHO05D000026 6.5e-06 55.5 83 41.0
SalBow4G1540 Salvia bowleyana HOM05D000072 ORTHO05D000026 6.5e-06 55.5 84 39.3


User provided reference genes

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