Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 2.4e-243 845.1 446 100.0
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 4.0e-169 598.6 398 82.4
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 2.5e-91 340.1 414 54.1
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 6.1e-69 265.8 413 45.0
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 3.9e-68 263.1 405 43.7
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 3.3e-67 260.0 423 44.0
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.1e-65 255.0 414 43.2
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 1.8e-65 254.2 410 45.4
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 7.2e-62 242.3 413 43.6
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.4e-60 238.0 419 41.8
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 2.0e-59 234.2 410 43.9
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 3.1e-57 226.9 399 44.4
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 5.9e-56 222.6 383 42.0
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.0e-55 221.9 393 42.5
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.6e-53 214.5 427 40.0
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 8.8e-52 208.8 402 39.1
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 4.1e-49 199.9 403 39.7
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 9.1e-49 198.7 417 38.6
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 2.0e-48 197.6 451 37.5
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 3.8e-47 193.4 409 37.7
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 2.8e-45 187.2 397 40.1
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 3.6e-45 186.8 404 38.4
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 4.7e-45 186.4 389 36.0
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.3e-44 184.1 382 37.7
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 3.0e-44 183.7 405 35.8
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 3.0e-44 183.7 418 38.3
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 4.0e-44 183.3 394 39.6
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 5.2e-44 183.0 412 37.6
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 8.3e-42 175.6 408 37.5
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 1.1e-41 175.3 424 35.1
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.4e-41 174.9 418 36.1
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 1.8e-41 174.5 395 36.7
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 3.2e-41 173.7 387 36.2
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 3.2e-41 173.7 404 36.6
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 9.2e-41 172.2 411 36.5
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.2e-40 171.8 406 35.0
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.2e-40 171.8 406 35.0
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 2.7e-40 170.6 370 40.3
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.9e-39 167.2 424 34.4
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 2.9e-39 167.2 411 38.2
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 3.9e-39 166.8 471 34.6
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 3.9e-39 166.8 405 35.6
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 8.6e-39 165.6 413 36.8
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 1.9e-38 164.5 400 35.5
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 9.5e-38 162.2 370 36.2
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 9.5e-38 162.2 315 39.0
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 1.6e-37 161.4 220 47.7
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.8e-37 160.6 409 33.7
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 2.8e-37 160.6 504 31.9
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.6e-37 160.2 386 35.0
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 4.0e-36 156.8 428 33.4
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 1.5e-35 154.8 421 34.0
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 3.4e-35 153.7 397 35.0
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 9.8e-35 152.1 342 38.3
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.7e-34 151.4 405 32.6
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 3.7e-34 150.2 428 32.7
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 2.4e-33 147.5 395 33.7
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 7.0e-33 146.0 401 33.7
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 7.0e-33 146.0 440 34.1
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.2e-32 145.2 429 32.9
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 2.0e-32 144.4 440 34.1
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 1.0e-31 142.1 345 34.5
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 1.1e-30 138.7 453 32.9
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.5e-30 138.3 312 37.8
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 1.9e-30 137.9 435 32.9
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 3.3e-30 137.1 433 32.3
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 3.3e-30 137.1 351 36.5
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 1.6e-29 134.8 357 33.9
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 1.4e-28 131.7 426 32.6
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 2.3e-28 131.0 411 32.1
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.2e-27 128.6 419 33.2
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 2.0e-27 127.9 395 32.7
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 2.0e-27 127.9 417 31.4
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 3.4e-27 127.1 417 32.1
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 5.8e-27 126.3 425 31.5
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 3.7e-26 123.6 407 31.4
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 4.9e-26 123.2 354 34.5
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 1.4e-25 121.7 412 30.6
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 4.1e-25 120.2 417 32.6
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 9.2e-25 119.0 163 45.4
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 1.2e-24 118.6 403 29.5
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-24 117.5 469 29.4
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 3.5e-24 117.1 395 32.4
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 4.6e-24 116.7 401 30.9
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 7.8e-24 115.9 408 32.6
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 3.9e-23 113.6 388 29.4
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 6.6e-23 112.8 405 30.4
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 6.6e-23 112.8 413 31.2
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 1.5e-22 111.7 418 31.3
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 4.3e-22 110.2 416 30.0
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 9.5e-22 109.0 399 31.1
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 9.5e-22 109.0 388 29.4
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 9.5e-22 109.0 401 28.9
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 1.6e-21 108.2 412 30.1
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 3.6e-21 107.1 390 29.7
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 4.7e-21 106.7 411 28.5
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.8e-20 104.8 405 29.9
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.3e-20 104.4 392 30.4
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 3.1e-20 104.0 333 29.7
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 5.2e-20 103.2 412 29.9
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 9.9e-19 99.0 379 29.3
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 1.1e-17 95.5 381 28.6
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 2.4e-17 94.4 410 26.3
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 1.3e-15 88.6 399 29.6
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.5e-14 85.1 93 53.8
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 7.3e-14 82.8 367 28.9
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.4e-12 78.6 171 38.0
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 6.8e-12 76.3 102 50.0
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 1.5e-11 75.1 221 33.9
Ca_27661_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 8.7e-07 59.3 157 35.7
Ca_27662_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 8.7e-07 59.3 157 35.7
Eucgr.K00850 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.5e-06 58.5 86 41.9
Hund01249 Selenicereus undatus HOM05D005864 ORTHO05D006770 5.6e-06 56.6 114 39.5


User provided reference genes

Program Settings