Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-61 239.6 113 100.0
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-55 218.4 113 90.3
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 9.4e-51 203.4 113 83.2
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.0e-49 199.9 113 84.1
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 1.2e-45 186.4 91 93.4
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 3.8e-44 181.4 120 76.7
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-34 149.8 105 70.5
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-29 132.1 112 56.2
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-20 103.2 106 48.1
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-20 103.2 106 49.1
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 5.2e-17 91.3 106 44.3
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 3.4e-16 88.6 105 40.0
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-16 88.6 96 43.8
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-16 88.6 96 43.8
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 4.4e-16 88.2 111 41.4
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 5.8e-16 87.8 105 41.0
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 7.5e-16 87.4 96 42.7
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 9.8e-16 87.0 104 39.4
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-15 86.3 96 42.7
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 2.2e-15 85.9 105 39.0
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-15 85.9 105 42.9
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-15 85.9 105 42.9
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-15 85.5 105 41.9
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-15 85.5 105 41.9
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-15 85.5 104 39.4
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 8.3e-15 84.0 96 42.7
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-14 83.6 105 41.9
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 1.4e-14 83.2 112 39.3
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-14 83.2 105 41.9
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-14 82.8 108 42.6
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-14 81.6 104 37.5
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.4e-14 81.3 104 39.4
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.0e-14 80.9 104 38.5
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-13 80.1 106 38.7
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.6e-13 79.7 107 39.3
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-13 79.3 106 35.8
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-13 79.3 113 38.1
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-13 79.3 104 38.5
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-13 78.6 106 36.8
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-13 78.6 106 35.8
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.5e-13 78.6 113 37.2
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.0e-13 77.8 101 37.6
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 7.8e-13 77.4 104 39.4
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-12 77.0 100 37.0
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-12 77.0 100 37.0
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 1.7e-12 76.3 99 39.4
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-12 76.3 102 40.2
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 2.3e-12 75.9 99 38.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 3.0e-12 75.5 99 39.4
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-12 75.5 106 36.8
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.9e-12 75.1 99 37.4
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.9e-12 75.1 99 37.4
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.9e-12 75.1 99 37.4
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.9e-12 75.1 106 36.8
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.9e-12 75.1 106 36.8
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.9e-12 75.1 107 35.5
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.0e-12 74.7 104 36.5
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.6e-12 74.3 104 34.6
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.6e-12 74.3 113 36.3
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 6.6e-12 74.3 106 37.7
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 8.6e-12 73.9 95 38.9
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 8.6e-12 73.9 108 32.4
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-11 72.8 107 34.6
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 1.9e-11 72.8 106 36.8
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.5e-11 72.4 110 32.7
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-11 72.0 104 33.7
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.6e-11 71.2 106 33.0
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 5.6e-11 71.2 106 34.9
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.3e-11 70.9 100 36.0
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 9.5e-11 70.5 105 36.2
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 9.5e-11 70.5 106 34.9
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-10 69.7 108 33.3
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 2.1e-10 69.3 104 37.5
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-10 69.3 108 36.1
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-10 68.9 108 34.3
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.8e-10 68.9 104 31.7
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-10 68.9 104 32.7
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-10 68.6 104 34.6
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.7e-10 68.2 103 37.9
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 6.2e-10 67.8 90 37.8
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.2e-10 67.8 110 34.5
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.1e-10 67.4 105 36.2
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-10 67.4 101 35.6
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-09 67.0 102 31.4
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-09 67.0 92 41.3
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-09 67.0 90 36.7
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-09 66.6 110 30.9
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.8e-09 66.2 105 35.2
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-09 66.2 111 30.6
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.3e-09 65.9 106 33.0
Atru.chr3.612 Acer truncatum HOM05D002599 ORTHO05D001895 3.1e-09 65.5 113 33.6
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-09 65.5 106 33.0
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-09 65.5 108 28.7
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-09 65.1 88 38.6
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.9e-09 63.9 77 41.6
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 8.9e-09 63.9 105 34.3
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 1.5e-08 63.2 99 35.4
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 1.5e-08 63.2 99 35.4
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 1.5e-08 63.2 101 34.7
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-08 62.8 88 36.4
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.0e-08 62.8 107 31.8
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-08 62.8 106 37.7
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-08 62.8 107 37.4
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 2.6e-08 62.4 104 31.7
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.4e-08 62.0 107 36.4
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 3.4e-08 62.0 107 30.8
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-08 61.6 104 32.7
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.4e-08 61.6 104 32.7
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.4e-08 61.6 108 31.5
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.8e-08 61.2 104 32.7
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 5.8e-08 61.2 105 30.5
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 7.5e-08 60.8 105 33.3
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 7.5e-08 60.8 108 26.9
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 9.9e-08 60.5 90 36.7
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 9.9e-08 60.5 108 26.9
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 9.9e-08 60.5 108 26.9
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 9.9e-08 60.5 108 26.9
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-07 60.1 109 35.8
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-07 60.1 101 31.7
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 1.3e-07 60.1 93 34.4
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 1.7e-07 59.7 95 34.7
COL.COLO4_17753 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.7e-07 59.7 108 30.6
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 1.7e-07 59.7 94 35.1
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-07 59.3 106 36.8
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 2.2e-07 59.3 95 32.6
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 2.2e-07 59.3 75 41.3
Potri.003G017566 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-07 58.2 108 28.7
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-07 58.2 103 32.0
Gohir.A04G133075 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.4e-07 57.8 102 34.3
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.3e-07 57.4 107 31.8
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.3e-07 57.4 108 26.9
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.3e-07 57.4 105 34.3
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 8.3e-07 57.4 108 31.5
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-06 57.0 101 31.7
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-06 56.6 77 37.7
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 1.9e-06 56.2 109 29.4
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-06 55.8 92 33.7
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-06 55.8 99 30.3
Duzib187G0682 Durio zibethinus HOM05D002599 ORTHO05D001895 3.2e-06 55.5 89 36.0
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-06 55.1 92 33.7
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 4.1e-06 55.1 82 32.9
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.1e-06 55.1 106 32.1
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.4e-06 54.7 102 30.4
EL10Ac5g12338 Beta vulgaris HOM05D035930 ORTHO05D001895 7.1e-06 54.3 109 30.3
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 7.1e-06 54.3 101 33.7


User provided reference genes

Program Settings