Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 3.2e-47 191.4 97 100.0
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.7e-45 185.7 97 95.9
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 8.4e-40 166.8 90 90.0
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 1.3e-37 159.5 90 86.7
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 1.7e-37 159.1 93 84.9
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 3.9e-37 157.9 90 86.7
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 6.6e-37 157.1 93 84.9
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 6.6e-37 157.1 93 84.9
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 8.7e-37 156.8 95 84.2
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 8.7e-37 156.8 94 86.2
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 1.1e-36 156.4 95 82.1
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 1.5e-36 156.0 88 88.6
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 1.9e-36 155.6 96 83.3
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.9e-36 155.6 97 83.5
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 1.9e-36 155.6 97 81.4
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 2.5e-36 155.2 90 86.7
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 3.3e-36 154.8 95 83.2
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 3.3e-36 154.8 88 87.5
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 3.3e-36 154.8 88 87.5
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 3.3e-36 154.8 88 87.5
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 3.3e-36 154.8 88 87.5
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 3.3e-36 154.8 99 81.8
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 4.3e-36 154.5 88 87.5
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 7.3e-36 153.7 92 84.8
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.3e-35 152.9 88 86.4
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 1.6e-35 152.5 85 88.2
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 1.6e-35 152.5 97 79.4
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 2.1e-35 152.1 82 89.0
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 2.8e-35 151.8 89 87.6
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 3.6e-35 151.4 90 85.6
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 6.2e-35 150.6 92 81.5
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 6.2e-35 150.6 86 88.4
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 1.4e-34 149.4 87 85.1
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 1.4e-34 149.4 84 86.9
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 1.8e-34 149.1 89 84.3
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 2.4e-34 148.7 97 79.4
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 3.1e-34 148.3 97 79.4
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 4.0e-34 147.9 88 83.0
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 6.9e-34 147.1 79 92.4
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 6.9e-34 147.1 79 92.4
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 6.9e-34 147.1 79 92.4
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 6.9e-34 147.1 79 92.4
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 9.0e-34 146.7 87 82.8
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 1.2e-33 146.4 92 81.5
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 1.2e-33 146.4 82 85.4
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.5e-33 146.0 80 88.8
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 2.0e-33 145.6 92 79.3
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 2.0e-33 145.6 86 83.7
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 2.6e-33 145.2 95 76.8
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 3.4e-33 144.8 97 80.4
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 3.4e-33 144.8 91 79.1
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 3.4e-33 144.8 86 82.6
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 4.5e-33 144.4 86 81.4
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 4.5e-33 144.4 94 76.6
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 4.5e-33 144.4 86 81.4
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 4.5e-33 144.4 81 86.4
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 5.8e-33 144.1 86 81.4
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 5.8e-33 144.1 86 81.4
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 5.8e-33 144.1 95 74.7
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 5.8e-33 144.1 82 85.4
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 7.6e-33 143.7 93 77.4
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 1.3e-32 142.9 89 79.8
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 1.3e-32 142.9 89 83.1
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 1.3e-32 142.9 86 80.2
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 2.2e-32 142.1 93 74.2
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 2.2e-32 142.1 78 88.5
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 2.2e-32 142.1 86 81.4
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 2.2e-32 142.1 122 66.4
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 2.9e-32 141.7 94 74.5
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 2.9e-32 141.7 86 82.6
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 2.9e-32 141.7 85 81.2
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 3.8e-32 141.4 93 76.3
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 4.9e-32 141.0 93 73.1
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 4.9e-32 141.0 85 81.2
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 4.9e-32 141.0 93 77.4
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 6.4e-32 140.6 93 76.3
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 6.4e-32 140.6 80 83.8
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 6.4e-32 140.6 81 82.7
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 6.4e-32 140.6 85 82.4
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 8.4e-32 140.2 90 80.0
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 8.4e-32 140.2 79 83.5
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 1.1e-31 139.8 81 84.0
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.4e-31 139.4 82 80.5
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 1.9e-31 139.0 82 81.7
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 1.9e-31 139.0 92 73.9
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 2.4e-31 138.7 82 82.9
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 2.4e-31 138.7 92 77.2
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 4.2e-31 137.9 93 71.0
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 4.2e-31 137.9 93 71.0
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 4.2e-31 137.9 93 71.0
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 4.2e-31 137.9 82 82.9
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 4.2e-31 137.9 81 81.5
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 4.2e-31 137.9 85 80.0
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 5.4e-31 137.5 92 75.0
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 1.2e-30 136.3 82 80.5
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 1.2e-30 136.3 108 67.6
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 1.6e-30 136.0 82 78.0
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 1.6e-30 136.0 82 78.0
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.6e-30 136.0 86 77.9
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 1.6e-30 136.0 78 83.3
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 2.1e-30 135.6 86 74.4
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 7.9e-30 133.7 79 83.5
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 1.0e-29 133.3 82 78.0
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 1.3e-29 132.9 92 71.7
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 1.3e-29 132.9 92 71.7
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 1.8e-29 132.5 91 73.6
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 5.1e-29 131.0 82 75.6
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 6.7e-29 130.6 79 78.5
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 1.1e-28 129.8 95 72.6
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 1.6e-27 125.9 81 75.3
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 5.3e-26 120.9 68 88.2
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 7.6e-25 117.1 143 49.0
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.3e-24 116.3 78 69.2
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 1.7e-24 115.9 139 49.6
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 2.9e-24 115.2 78 69.2
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 4.9e-24 114.4 62 90.3
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 8.4e-24 113.6 70 81.4
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.0e-16 90.1 55 81.8
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.0e-16 90.1 55 81.8
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.0e-16 90.1 55 81.8
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 2.5e-15 85.5 85 52.9
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 3.9e-13 78.2 59 69.5
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 7.6e-09 63.9 41 75.6


User provided reference genes

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