Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0090100 Salix brachista HOM05D001186 ORTHO05D000971 1.3e-73 279.6 144 100.0
Potri.007G110100 Populus trichocarpa HOM05D001186 ORTHO05D000971 4.6e-50 201.4 127 82.7
Potri.005G057800 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.7e-42 175.6 129 75.2
Sabra05G0049800 Salix brachista HOM05D001186 ORTHO05D000971 2.7e-42 175.6 127 70.9
Manes.12G152600 Manihot esculenta HOM05D001186 ORTHO05D000971 2.1e-23 112.8 119 58.0
Psat7g047880 Pisum sativum HOM05D001186 ORTHO05D000971 3.0e-17 92.4 123 50.4
TPR.G29601 Trifolium pratense HOM05D001186 ORTHO05D000971 5.1e-17 91.7 123 51.2
PGR119G0869 Punica granatum HOM05D001186 ORTHO05D000971 8.7e-17 90.9 117 50.4
Medtr8g093335 Medicago truncatula HOM05D001186 ORTHO05D000971 1.1e-16 90.5 123 51.2
Medtr8g093390 Medicago truncatula HOM05D001186 ORTHO05D000971 1.1e-16 90.5 123 51.2
Lj4g0024168 Lotus japonicus HOM05D001186 ORTHO05D000971 1.9e-16 89.7 125 47.2
TWI79G1231 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 2.5e-16 89.4 139 46.8
Lalb_Chr13g0296541 Lupinus albus HOM05D001186 ORTHO05D000971 3.3e-16 89.0 122 50.0
Sed0011999 Sechium edule HOM05D001186 ORTHO05D000971 5.6e-16 88.2 118 51.7
Cpa.g.sc42.113 Carica papaya HOM05D001186 ORTHO05D000971 9.6e-16 87.4 115 49.6
THA.LOC104821856 Tarenaya hassleriana HOM05D001186 ORTHO05D000971 1.3e-15 87.0 116 52.6
CSS0020698 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 2.1e-15 86.3 135 46.7
BcaC05g28582 Brassica carinata HOM05D001186 ORTHO05D000971 4.8e-15 85.1 116 52.6
C05p46850 Brassica napus HOM05D001186 ORTHO05D000971 4.8e-15 85.1 116 52.6
BolC5t33415H Brassica oleracea HOM05D001186 ORTHO05D000971 4.8e-15 85.1 116 52.6
Ca_28450_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 4.8e-15 85.1 120 47.5
Atru.chr4.785 Acer truncatum HOM05D001186 ORTHO05D000971 1.1e-14 84.0 124 45.2
Aa31LG8G5520 Aethionema arabicum HOM05D001186 ORTHO05D000971 1.8e-14 83.2 117 48.7
A05p30930 Brassica napus HOM05D001186 ORTHO05D000971 2.4e-14 82.8 119 49.6
BraA05t21935Z Brassica rapa HOM05D001186 ORTHO05D000971 2.4e-14 82.8 119 49.6
Thhalv10021464m.g Eutrema salsugineum HOM05D001186 ORTHO05D000971 4.0e-14 82.0 124 46.8
CiPaw.03G128100 Carya illinoinensis HOM05D001186 ORTHO05D000971 5.3e-14 81.6 123 45.5
Glyma.05G190000 Glycine max HOM05D001186 ORTHO05D000971 5.3e-14 81.6 140 46.4
Lalb_Chr07g0184491 Lupinus albus HOM05D001186 ORTHO05D000971 5.3e-14 81.6 121 44.6
FAN26G1531 Fragaria x ananassa HOM05D001186 ORTHO05D000971 6.9e-14 81.3 135 45.2
FvH4_1g24040 Fragaria vesca HOM05D001186 ORTHO05D000971 9.0e-14 80.9 135 44.4
CANSAT01G2763 Cannabis sativa HOM05D001186 ORTHO05D000971 1.2e-13 80.5 127 46.5
Hma1.2p1_0006F.1_g004610 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 1.2e-13 80.5 127 44.9
Sc07g0001670 Simmondsia chinensis HOM05D001186 ORTHO05D000971 1.2e-13 80.5 122 45.1
Duzib187G0304 Durio zibethinus HOM05D001186 ORTHO05D000971 1.5e-13 80.1 115 53.0
BcaB06g25920 Brassica carinata HOM05D001186 ORTHO05D000971 2.0e-13 79.7 118 47.5
Glyma.06G151400 Glycine max HOM05D001186 ORTHO05D000971 2.6e-13 79.3 117 44.4
FAN23G1856 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.4e-13 79.0 135 44.4
VMungo1309G2779 Vigna mungo HOM05D001186 ORTHO05D000971 3.4e-13 79.0 122 47.5
Glyma.04G214700 Glycine max HOM05D001186 ORTHO05D000971 5.8e-13 78.2 116 50.0
FAN19G1131 Fragaria x ananassa HOM05D001186 ORTHO05D000971 7.6e-13 77.8 135 43.7
FAN28G0084 Fragaria x ananassa HOM05D001186 ORTHO05D000971 7.6e-13 77.8 136 43.4
Sp3g16760 Schrenkiella parvula HOM05D001186 ORTHO05D000971 7.6e-13 77.8 124 45.2
unitig_899.g14702 Utricularia gibba HOM05D001186 ORTHO05D000971 7.6e-13 77.8 124 46.0
Haze_25129 Corylus avellana HOM05D001186 ORTHO05D000971 1.7e-12 76.6 121 45.5
CiPaw.04G086200 Carya illinoinensis HOM05D001186 ORTHO05D000971 2.2e-12 76.3 119 46.2
CsaV3_2G018150 Cucumis sativus L. HOM05D001186 ORTHO05D000971 2.2e-12 76.3 116 49.1
Sed0007872 Sechium edule HOM05D001186 ORTHO05D000971 2.2e-12 76.3 117 47.0
A03p40770 Brassica napus HOM05D001186 ORTHO05D000971 2.9e-12 75.9 88 56.8
BraA03t13235Z Brassica rapa HOM05D001186 ORTHO05D000971 2.9e-12 75.9 88 56.8
RcHm_v2.0_Chr2g0120181 Rosa chinensis HOM05D001186 ORTHO05D000971 2.9e-12 75.9 129 43.4
BcaB04g18998 Brassica carinata HOM05D001186 ORTHO05D000971 3.8e-12 75.5 115 49.6
Phvul.009G148500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 4.9e-12 75.1 122 45.1
Oeu024887.1 Olea europaea HOM05D001186 ORTHO05D000971 6.4e-12 74.7 127 44.1
Phvul.002G270600 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 6.4e-12 74.7 121 46.3
MELO3C023257.2 Cucumis melo HOM05D001186 ORTHO05D000971 8.4e-12 74.3 116 48.3
DCAR_001357 Daucus carota HOM05D001186 ORTHO05D000971 8.4e-12 74.3 145 41.4
Cfa002833 Carpinus fangiana HOM05D001186 ORTHO05D000971 1.1e-11 73.9 123 45.5
COL.COLO4_14006 Corchorus olitorius HOM05D001186 ORTHO05D000971 1.1e-11 73.9 115 51.3
Glyma.08G147600 Glycine max HOM05D001186 ORTHO05D000971 1.1e-11 73.9 118 48.3
Rhsim08G0003200 Rhododendron simsii HOM05D001186 ORTHO05D000971 1.1e-11 73.9 136 43.4
AT3G18690 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 1.4e-11 73.6 93 50.5
BcaB04g20756 Brassica carinata HOM05D001186 ORTHO05D000971 1.4e-11 73.6 126 43.7
Duzib264G1003 Durio zibethinus HOM05D001186 ORTHO05D000971 1.4e-11 73.6 141 44.0
VMungo0251G0634 Vigna mungo HOM05D001186 ORTHO05D000971 1.4e-11 73.6 123 45.5
BcaC09g48824 Brassica carinata HOM05D001186 ORTHO05D000971 1.9e-11 73.2 120 45.8
C01p45550 Brassica napus HOM05D001186 ORTHO05D000971 1.9e-11 73.2 120 45.8
Sabra05G0144600 Salix brachista HOM05D001186 ORTHO05D000971 1.9e-11 73.2 158 39.9
BcaC01g03684 Brassica carinata HOM05D001186 ORTHO05D000971 2.4e-11 72.8 88 55.7
C03p49650 Brassica napus HOM05D001186 ORTHO05D000971 2.4e-11 72.8 88 55.7
BolC3t17262H Brassica oleracea HOM05D001186 ORTHO05D000971 2.4e-11 72.8 88 55.7
BraA01t03658Z Brassica rapa HOM05D001186 ORTHO05D000971 3.2e-11 72.4 120 45.8
Carub.0003s1847 Capsella rubella HOM05D001186 ORTHO05D000971 3.2e-11 72.4 133 40.6
Duzib147G0658 Durio zibethinus HOM05D001186 ORTHO05D000971 3.2e-11 72.4 135 45.9
Oeu002640.2 Olea europaea HOM05D001186 ORTHO05D000971 3.2e-11 72.4 96 45.8
Dinv24322 Davidia involucrata HOM05D001186 ORTHO05D000971 4.2e-11 72.0 84 52.4
Nitab4.5_0004813g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 4.2e-11 72.0 101 49.5
Cfa018343 Carpinus fangiana HOM05D001186 ORTHO05D000971 9.3e-11 70.9 162 35.2
Gohir.A12G001200 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.2e-10 70.5 133 43.6
Gohir.D12G000900 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.2e-10 70.5 141 41.8
BolC1t04518H Brassica oleracea HOM05D001186 ORTHO05D000971 1.6e-10 70.1 96 49.0
Thecc.01G125600 Theobroma cacao HOM05D001186 ORTHO05D000971 1.6e-10 70.1 128 45.3
CARHR094070 Cardamine hirsuta HOM05D001186 ORTHO05D000971 2.1e-10 69.7 90 53.3
Lsat_1_v5_gn_9_40280 Lactuca sativa HOM05D001186 ORTHO05D000971 2.1e-10 69.7 136 41.2
Potri.005G189300 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.1e-10 69.7 146 40.4
AL3G32010 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 2.7e-10 69.3 88 52.3
AL3G32030 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 2.7e-10 69.3 88 52.3
Cc07_g17900 Coffea canephora HOM05D001186 ORTHO05D000971 2.7e-10 69.3 121 50.4
Gorai.008G000200 Gossypium raimondii HOM05D001186 ORTHO05D000971 2.7e-10 69.3 88 53.4
Nitab4.5_0002121g0030 Nicotiana tabacum HOM05D001186 ORTHO05D000971 2.7e-10 69.3 101 47.5
SGA_v2.0_scaffold250G45000 Striga asiatica HOM05D001186 ORTHO05D000971 2.7e-10 69.3 117 41.9
A01p35790 Brassica napus HOM05D001186 ORTHO05D000971 3.5e-10 68.9 120 45.0
QL06p029571 Quercus lobata HOM05D001186 ORTHO05D000971 4.6e-10 68.6 132 40.9
Gohir.D10G106100 Gossypium hirsutum HOM05D001186 ORTHO05D000971 7.9e-10 67.8 123 45.5
Peaxi162Scf00012g00206 Petunia axillaris HOM05D001186 ORTHO05D000971 7.9e-10 67.8 94 48.9
Dinv11325 Davidia involucrata HOM05D001186 ORTHO05D000971 1.0e-09 67.4 92 47.8
Solyc11g005720.1 Solanum lycopersicum HOM05D001186 ORTHO05D000971 1.0e-09 67.4 138 42.8
DCAR_014345 Daucus carota HOM05D001186 ORTHO05D000971 1.3e-09 67.0 122 42.6
Gorai.011G116000 Gossypium raimondii HOM05D001186 ORTHO05D000971 1.3e-09 67.0 123 45.5
Manes.18G089366 Manihot esculenta HOM05D001186 ORTHO05D000971 1.3e-09 67.0 146 38.4
Haze_17728 Corylus avellana HOM05D001186 ORTHO05D000971 1.8e-09 66.6 163 33.1
Manes.02G176600 Manihot esculenta HOM05D001186 ORTHO05D000971 3.0e-09 65.9 153 37.9
Oeu014479.1 Olea europaea HOM05D001186 ORTHO05D000971 3.0e-09 65.9 154 36.4
QL02p024757 Quercus lobata HOM05D001186 ORTHO05D000971 3.0e-09 65.9 143 37.8
Migut.H00745 Erythranthe guttata HOM05D001186 ORTHO05D000971 5.1e-09 65.1 128 41.4
Sabra02G0055300 Salix brachista HOM05D001186 ORTHO05D000971 5.1e-09 65.1 162 37.0
MSTRG.2669 Avicennia marina HOM05D001186 ORTHO05D000971 8.7e-09 64.3 129 38.0
Prupe.2G000100 Prunus persica HOM05D001186 ORTHO05D000971 8.7e-09 64.3 140 40.0
PSO675G0766 Papaver somniferum HOM05D001186 ORTHO05D000971 1.1e-08 63.9 139 37.4
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 1.1e-08 63.9 116 43.1
HPP92_026215 Vanilla planifolia HOM05D001186 ORTHO05D000971 1.9e-08 63.2 127 41.7
Lsat_1_v5_gn_1_8801 Lactuca sativa HOM05D001186 ORTHO05D000971 2.5e-08 62.8 98 45.9
MBI17_g11165_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 3.3e-08 62.4 124 39.5
Actinidia15150 Actinidia chinensis HOM05D001186 ORTHO05D000971 4.3e-08 62.0 116 39.7
Eucgr.F02723 Eucalyptus grandis HOM05D001186 ORTHO05D000971 4.3e-08 62.0 134 38.1
PGSC0003DMG400028672 Solanum tuberosum HOM05D001186 ORTHO05D000971 5.6e-08 61.6 136 41.2
EL10Ac6g15268 Beta vulgaris HOM05D001186 ORTHO05D000971 7.4e-08 61.2 98 42.9
CSS0038492 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 7.4e-08 61.2 109 41.3
Ca_16665_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 7.4e-08 61.2 135 40.0
PSO541G5231 Papaver somniferum HOM05D001186 ORTHO05D000971 7.4e-08 61.2 143 35.0
HanXRQChr02g0037451 Helianthus annuus HOM05D001186 ORTHO05D000971 1.3e-07 60.5 100 46.0
Hma1.2p1_0483F.1_g162740 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 1.6e-07 60.1 116 37.1
Sopen11g001680 Solanum pennellii HOM05D001186 ORTHO05D000971 1.6e-07 60.1 138 39.1
Oeu051260.1 Olea europaea HOM05D001186 ORTHO05D000971 2.8e-07 59.3 157 35.0
Psat5g080400 Pisum sativum HOM05D001186 ORTHO05D000971 2.8e-07 59.3 153 37.9
HanXRQChr04g0109411 Helianthus annuus HOM05D001186 ORTHO05D000971 4.8e-07 58.5 121 38.0
Peaxi162Scf00263g00083 Petunia axillaris HOM05D001186 ORTHO05D000971 4.8e-07 58.5 149 32.2
PGR042G2791 Punica granatum HOM05D001186 ORTHO05D000971 4.8e-07 58.5 142 38.0
CSS0034671 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 6.2e-07 58.2 146 35.6
Eucgr.C02621 Eucalyptus grandis HOM05D001186 ORTHO05D000971 6.2e-07 58.2 122 40.2
CiPaw.16G016300 Carya illinoinensis HOM05D001186 ORTHO05D000971 8.1e-07 57.8 135 37.8
Eucgr.I00226 Eucalyptus grandis HOM05D001186 ORTHO05D000971 8.1e-07 57.8 131 38.9
TWI60G0870 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 8.1e-07 57.8 132 37.9
TAR628G0442 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.1e-06 57.4 137 38.0
Cpa.g.sc49.47 Carica papaya HOM05D001186 ORTHO05D000971 1.4e-06 57.0 120 35.8
Eucgr.C02629 Eucalyptus grandis HOM05D001186 ORTHO05D000971 2.4e-06 56.2 116 40.5
SalBow7G3795 Salvia bowleyana HOM05D001186 ORTHO05D000971 2.4e-06 56.2 121 34.7
TWI34G0256 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 2.4e-06 56.2 112 36.6
Lj4P850T14 Lonicera japonica HOM05D001186 ORTHO05D000971 3.1e-06 55.8 90 42.2
GSVIVG01001661001 Vitis vinifera HOM05D001186 ORTHO05D000971 3.1e-06 55.8 154 32.5
Ciclev10026434m.g Citrus clementina HOM05D001186 ORTHO05D000971 4.0e-06 55.5 132 41.7
QL09p032224 Quercus lobata HOM05D000101 ORTHO05D002559 5.3e-06 55.1 112 42.0
SGA_v2.0_scaffold48G17954 Striga asiatica HOM05D001186 ORTHO05D000971 5.3e-06 55.1 122 36.1
Glyma.04G239400 Glycine max HOM05D001186 ORTHO05D000971 6.9e-06 54.7 148 36.5
ClCG02G000620 Citrullus lanatus HOM05D001186 ORTHO05D000971 9.0e-06 54.3 118 39.0
Cc10_g14190 Coffea canephora HOM05D001186 ORTHO05D000971 9.0e-06 54.3 121 41.3


User provided reference genes

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