Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 9.4e-53 209.9 106 100.0
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.6e-47 192.6 106 94.3
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 4.7e-44 181.0 107 86.9
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.2e-42 176.4 107 83.2
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.3e-33 146.4 108 70.4
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 1.7e-33 146.0 107 70.1
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.4e-32 142.9 108 68.5
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 1.8e-32 142.5 102 72.5
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 9.2e-32 140.2 104 71.2
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 3.5e-31 138.3 107 67.3
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 4.6e-31 137.9 108 67.6
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.0e-30 136.7 101 67.3
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 3.9e-30 134.8 104 68.3
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 5.0e-30 134.4 107 64.5
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 8.6e-30 133.7 106 63.2
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.1e-29 133.3 107 63.6
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 1.1e-29 133.3 107 63.6
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 1.5e-29 132.9 107 63.6
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.5e-29 132.9 102 65.7
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 2.5e-29 132.1 108 65.7
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 3.3e-29 131.7 105 67.6
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.2e-28 129.8 103 64.1
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.6e-28 129.4 103 65.0
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 2.1e-28 129.0 105 57.1
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.1e-28 129.0 96 65.6
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 8.0e-28 127.1 102 63.7
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 8.0e-28 127.1 102 63.7
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 8.0e-28 127.1 106 62.3
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.4e-27 126.3 96 65.6
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.8e-27 125.9 97 67.0
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 3.1e-27 125.2 95 66.3
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 5.2e-27 124.4 103 62.1
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 8.9e-27 123.6 103 60.2
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.5e-26 122.9 106 56.6
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 1.5e-26 122.9 114 59.6
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 2.6e-26 122.1 103 62.1
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.4e-26 121.7 109 59.6
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 4.4e-26 121.3 106 59.4
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 4.4e-26 121.3 106 57.5
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 5.8e-26 120.9 106 56.6
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 7.5e-26 120.6 91 65.9
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 9.8e-26 120.2 98 62.2
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.3e-25 119.8 106 55.7
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.3e-25 119.8 109 59.6
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.3e-25 119.8 105 60.0
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 1.7e-25 119.4 111 60.4
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 2.9e-25 118.6 114 57.0
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 3.7e-25 118.2 114 57.0
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 6.4e-25 117.5 102 62.7
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 8.3e-25 117.1 118 57.6
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 8.3e-25 117.1 104 60.6
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 1.1e-24 116.7 118 57.6
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.4e-24 116.3 105 56.2
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 1.9e-24 115.9 108 59.3
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 2.4e-24 115.5 104 57.7
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 3.2e-24 115.2 116 54.3
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.1e-24 114.8 107 57.9
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 4.1e-24 114.8 74 71.6
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 5.4e-24 114.4 95 61.1
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 5.4e-24 114.4 95 57.9
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 7.0e-24 114.0 97 57.7
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 7.0e-24 114.0 89 62.9
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 7.0e-24 114.0 83 67.5
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 9.2e-24 113.6 96 60.4
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 9.2e-24 113.6 108 58.3
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 1.2e-23 113.2 102 58.8
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 1.2e-23 113.2 97 60.8
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.6e-23 112.8 79 69.6
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.6e-23 112.8 79 69.6
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 2.0e-23 112.5 117 53.0
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 2.0e-23 112.5 78 69.2
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 2.0e-23 112.5 82 63.4
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.0e-23 112.5 100 57.0
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 2.7e-23 112.1 107 55.1
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 4.6e-23 111.3 108 52.8
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 6.0e-23 110.9 125 53.6
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 7.8e-23 110.5 125 52.8
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 1.0e-22 110.2 104 54.8
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 2.3e-22 109.0 104 53.8
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 2.3e-22 109.0 110 53.6
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 2.3e-22 109.0 110 53.6
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.9e-22 108.2 73 67.1
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 5.0e-22 107.8 110 52.7
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 5.0e-22 107.8 95 61.1
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 6.6e-22 107.5 89 60.7
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 6.6e-22 107.5 107 54.2
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 6.6e-22 107.5 92 56.5
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 6.6e-22 107.5 109 53.2
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 6.6e-22 107.5 83 62.7
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 6.6e-22 107.5 89 59.6
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 8.6e-22 107.1 109 53.2
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.6e-22 107.1 81 65.4
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.1e-21 106.7 104 54.8
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.1e-21 106.7 73 65.8
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 1.1e-21 106.7 109 52.3
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 1.5e-21 106.3 83 66.3
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.5e-21 106.3 83 62.7
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.9e-21 105.9 105 52.4
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 2.5e-21 105.5 100 55.0
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 2.5e-21 105.5 92 57.6
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 2.5e-21 105.5 92 57.6
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 2.5e-21 105.5 92 57.6
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 2.5e-21 105.5 82 63.4
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 3.3e-21 105.1 100 55.0
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 4.3e-21 104.8 75 68.0
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 7.3e-21 104.0 108 50.9
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 1.2e-20 103.2 62 77.4
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.2e-20 103.2 94 55.3
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.6e-20 102.8 92 56.5
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 2.1e-20 102.4 90 57.8
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.1e-20 102.4 112 51.8
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 6.2e-20 100.9 84 56.0
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 1.1e-19 100.1 100 50.0
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 4.0e-19 98.2 72 61.1
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 6.8e-19 97.4 81 56.8
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 8.9e-19 97.1 72 65.3
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 3.4e-18 95.1 91 52.7
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 9.8e-18 93.6 105 46.7
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 1.7e-17 92.8 58 74.1
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 1.4e-16 89.7 104 48.1
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.1e-16 88.2 70 54.3
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 7.8e-15 84.0 79 55.7
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 5.6e-13 77.8 68 51.5
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 2.3e-11 72.4 66 48.5
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 2.3e-11 72.4 71 47.9
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 5.2e-11 71.2 59 54.2
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 6.4e-09 64.3 52 69.2
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 1.0e-06 57.0 51 58.8
Ca_10674_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.3e-06 56.6 46 67.4


User provided reference genes

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