Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 0.0e+00 1277.7 756 100.0
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 6.0e-303 1043.9 749 85.7
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 2.2e-39 168.3 813 28.4
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 1.3e-34 152.5 730 35.6
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 9.5e-30 136.3 810 27.3
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 2.7e-29 134.8 834 31.2
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 1.0e-28 132.9 803 27.3
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 4.0e-28 131.0 865 28.9
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 8.8e-28 129.8 805 27.1
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 5.7e-27 127.1 815 27.5
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 2.4e-25 121.7 771 28.5
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 9.2e-25 119.8 800 29.6
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 9.2e-25 119.8 781 32.4
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 5.9e-24 117.1 784 32.5
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 5.6e-22 110.5 298 35.6
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.0e-20 106.3 991 27.1
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 9.2e-17 93.2 134 45.5
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 3.5e-16 91.3 134 45.5
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 5.9e-16 90.5 816 26.8
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 7.8e-16 90.1 134 44.8
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 7.8e-16 90.1 134 44.8
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 3.0e-15 88.2 704 26.6
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 2.5e-14 85.1 167 40.1
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 7.3e-14 83.6 790 30.4
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 7.3e-14 83.6 801 25.8
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.8e-13 81.6 786 29.6
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 8.0e-13 80.1 759 26.9
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 4.4e-11 74.3 843 25.0
FAN08G2906 Fragaria x ananassa HOM05D012473 ORTHO05D010844 7.5e-11 73.6 172 36.0
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 9.8e-11 73.2 785 29.3
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 6.4e-10 70.5 181 42.5
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 8.3e-10 70.1 829 25.5
FvH4_5g34270 Fragaria vesca HOM05D012473 ORTHO05D010844 4.1e-09 67.8 313 28.4
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 4.1e-09 67.8 150 44.0
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 4.1e-09 67.8 183 36.6
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 5.4e-09 67.4 813 26.3
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 9.2e-09 66.6 203 37.9
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 9.2e-09 66.6 812 24.9
Atru.chr6.1276 Acer truncatum HOM05D017996 ORTHO05D017165 1.6e-08 65.9 200 35.0
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 1.6e-08 65.9 166 36.7
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 2.7e-08 65.1 225 39.6
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 4.6e-08 64.3 166 36.1
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 7.8e-08 63.5 417 27.3
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 1.3e-07 62.8 204 36.3
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 6.6e-07 60.5 764 25.7
Nitab4.5_0000350g0130 Nicotiana tabacum HOM05D010873 ORTHO05D013124 8.6e-07 60.1 174 35.6
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 2.5e-06 58.5 198 33.8
CARHR098770 Cardamine hirsuta HOM05D009813 ORTHO05D011936 2.5e-06 58.5 142 37.3
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 2.5e-06 58.5 148 35.1
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 2.5e-06 58.5 152 39.5
Oeu028233.1 Olea europaea HOM05D010873 ORTHO05D013124 3.3e-06 58.2 183 35.5
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 9.5e-06 56.6 155 38.7


User provided reference genes

Program Settings