Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0065300 Salix brachista HOM05D008370 ORTHO05D009732 1.2e-36 156.0 76 100.0
Potri.007G077300 Populus trichocarpa HOM05D008370 ORTHO05D009732 3.9e-32 141.0 77 89.6
Potri.005G087000 Populus trichocarpa HOM05D008370 ORTHO05D009732 2.9e-27 124.8 77 81.8
Sabra05G0071700 Salix brachista HOM05D008370 ORTHO05D009732 9.2e-26 119.8 77 79.2
Dinv05773 Davidia involucrata HOM05D008370 ORTHO05D009732 5.6e-15 84.0 76 56.6
Thecc.07G145600 Theobroma cacao HOM05D008370 ORTHO05D009732 4.7e-14 80.9 76 51.3
COL.COLO4_22370 Corchorus olitorius HOM05D008370 ORTHO05D009732 5.2e-13 77.4 75 53.3
Actinidia01380 Actinidia chinensis HOM05D008370 ORTHO05D009732 2.6e-12 75.1 80 56.2
Manes.12G145500 Manihot esculenta HOM05D008370 ORTHO05D009732 9.9e-12 73.2 81 50.6
CiPaw.04G088900 Carya illinoinensis HOM05D008370 ORTHO05D009732 1.3e-11 72.8 71 57.7
COL.COLO4_17423 Corchorus olitorius HOM05D008370 ORTHO05D009732 1.3e-11 72.8 76 46.1
Lj1g0003311 Lotus japonicus HOM05D008370 ORTHO05D009732 1.7e-11 72.4 81 48.1
Thecc.01G117100 Theobroma cacao HOM05D008370 ORTHO05D009732 2.2e-11 72.0 78 50.0
Ciclev10026869m.g Citrus clementina HOM05D008370 ORTHO05D009732 2.9e-11 71.6 82 52.4
Manes.13G080360 Manihot esculenta HOM05D008370 ORTHO05D009732 3.8e-11 71.2 80 52.5
TPR.G2215 Trifolium pratense HOM05D010746 ORTHO05D009732 6.4e-11 70.5 83 51.8
Actinidia12221 Actinidia chinensis HOM05D008370 ORTHO05D009732 8.4e-11 70.1 79 51.9
Gorai.003G048600 Gossypium raimondii HOM05D008370 ORTHO05D009732 8.4e-11 70.1 78 48.7
Gohir.D03G047500 Gossypium hirsutum HOM05D008370 ORTHO05D009732 1.4e-10 69.3 78 48.7
MD01G1015700 Malus domestica HOM05D008370 ORTHO05D009732 1.4e-10 69.3 81 49.4
arahy.Tifrunner.gnm1.ann1.Q4N452 Arachis hypogaea HOM05D010746 ORTHO05D009732 1.9e-10 68.9 85 44.7
arahy.Tifrunner.gnm1.ann1.R1SWRL Arachis hypogaea HOM05D010746 ORTHO05D009732 1.9e-10 68.9 85 44.7
Oeu028352.1 Olea europaea HOM05D008370 ORTHO05D009732 1.9e-10 68.9 76 44.7
Glyma.05G186300 Glycine max HOM05D008370 ORTHO05D009732 2.4e-10 68.6 77 48.1
Duzib147G0345 Durio zibethinus HOM05D008370 ORTHO05D009732 3.2e-10 68.2 78 46.2
Rhsim08G0004800 Rhododendron simsii HOM05D008370 ORTHO05D009732 3.2e-10 68.2 82 51.2
TPR.G2226 Trifolium pratense HOM05D008370 ORTHO05D009732 5.4e-10 67.4 79 48.1
CSS0039971 Camellia sinensis var. sinensis HOM05D008370 ORTHO05D009732 7.1e-10 67.0 77 50.6
Lj4g0015780 Lotus japonicus HOM05D008370 ORTHO05D009732 7.1e-10 67.0 78 47.4
Duzib187G1656 Durio zibethinus HOM05D008370 ORTHO05D009732 9.2e-10 66.6 83 50.6
Oeu001983.1 Olea europaea HOM05D008370 ORTHO05D009732 9.2e-10 66.6 76 43.4
Phvul.002G267404 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 9.2e-10 66.6 70 54.3
Lj4g0014601 Lotus japonicus HOM05D010746 ORTHO05D009732 1.6e-09 65.9 84 44.0
Lalb_Chr12g0203401 Lupinus albus HOM05D010746 ORTHO05D009732 1.6e-09 65.9 81 44.4
Gohir.A01G042000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 2.1e-09 65.5 79 46.8
Gorai.002G039200 Gossypium raimondii HOM05D008370 ORTHO05D009732 2.1e-09 65.5 79 46.8
Prupe.6G166000 Prunus persica HOM05D015647 ORTHO05D009732 2.1e-09 65.5 85 45.9
Medtr8g092340 Medicago truncatula HOM05D010746 ORTHO05D009732 2.7e-09 65.1 79 45.6
CiPaw.04G088800 Carya illinoinensis HOM05D008370 ORTHO05D009732 3.5e-09 64.7 76 44.7
Cfa002787 Carpinus fangiana HOM05D008370 ORTHO05D009732 4.6e-09 64.3 77 48.1
Glyma.08G144800 Glycine max HOM05D008370 ORTHO05D009732 7.8e-09 63.5 69 49.3
MD15G1335300 Malus domestica HOM05D015647 ORTHO05D009732 1.0e-08 63.2 90 44.4
Cfa002786 Carpinus fangiana HOM05D008370 ORTHO05D009732 1.3e-08 62.8 68 48.5
Haze_25084 Corylus avellana HOM05D008370 ORTHO05D009732 1.3e-08 62.8 68 48.5
Lalb_Chr07g0184691 Lupinus albus HOM05D010746 ORTHO05D009732 1.7e-08 62.4 65 52.3
Psat7g050120 Pisum sativum HOM05D010746 ORTHO05D009732 1.7e-08 62.4 80 45.0
TAR376G0884 Trochodendron aralioides HOM05D008370 ORTHO05D009732 1.7e-08 62.4 73 47.9
Gohir.A02G136703 Gossypium hirsutum HOM05D008370 ORTHO05D009732 2.3e-08 62.0 81 46.9
Eucgr.I00294 Eucalyptus grandis HOM05D008370 ORTHO05D009732 3.0e-08 61.6 75 48.0
Gohir.D01G030000 Gossypium hirsutum HOM05D008370 ORTHO05D009732 3.0e-08 61.6 79 48.1
Phvul.009G138200 Phaseolus vulgaris HOM05D008370 ORTHO05D009732 3.0e-08 61.6 79 43.0
arahy.Tifrunner.gnm1.ann1.G5B6SC Arachis hypogaea HOM05D008370 ORTHO05D009732 3.9e-08 61.2 80 42.5
Glyma.04G217800 Glycine max HOM05D008370 ORTHO05D009732 3.9e-08 61.2 79 44.3
Glyma.05G186400 Glycine max HOM05D010746 ORTHO05D009732 3.9e-08 61.2 82 42.7
CiPaw.03G131600 Carya illinoinensis HOM05D008370 ORTHO05D009732 5.1e-08 60.8 69 49.3
Psat7g050080 Pisum sativum HOM05D008370 ORTHO05D009732 8.7e-08 60.1 80 46.2
QL06p031372 Quercus lobata HOM05D008370 ORTHO05D009732 8.7e-08 60.1 75 46.7
Cc07_g16670 Coffea canephora HOM05D008370 ORTHO05D009732 1.1e-07 59.7 77 50.6
arahy.Tifrunner.gnm1.ann1.Z046N5 Arachis hypogaea HOM05D010746 ORTHO05D009732 1.9e-07 58.9 85 43.5
QL06p031379 Quercus lobata HOM05D008370 ORTHO05D009732 4.3e-07 57.8 67 43.3
FvH4_1g23211 Fragaria vesca HOM05D024037 ORTHO05D009732 7.3e-07 57.0 82 46.3
Glyma.06G148100 Glycine max HOM05D008370 ORTHO05D009732 7.3e-07 57.0 82 43.9
arahy.Tifrunner.gnm1.ann1.U48W6H Arachis hypogaea HOM05D008370 ORTHO05D009732 1.2e-06 56.2 75 42.7
Psat5g065200 Pisum sativum HOM05D010746 ORTHO05D009732 1.6e-06 55.8 82 43.9
TPR.G227 Trifolium pratense HOM05D010746 ORTHO05D009732 1.6e-06 55.8 81 42.0
arahy.Tifrunner.gnm1.ann1.3XNV5U Arachis hypogaea HOM05D008370 ORTHO05D009732 2.1e-06 55.5 78 46.2
SalBow5G4820 Salvia bowleyana HOM05D008370 ORTHO05D009732 2.1e-06 55.5 76 44.7
Peaxi162Scf00025g03219 Petunia axillaris HOM05D024571 ORTHO05D025903 2.8e-06 55.1 77 41.6
Cpa.g.sc72.52 Carica papaya HOM05D008370 ORTHO05D009732 4.7e-06 54.3 72 41.7
CiPaw.15G013300 Carya illinoinensis HOM05D033767 ORTHO05D128655 4.7e-06 54.3 81 45.7
Lj1g0003131 Lotus japonicus HOM05D010746 ORTHO05D009732 6.2e-06 53.9 88 40.9
Lalb_Chr12g0203411 Lupinus albus HOM05D008370 ORTHO05D009732 8.1e-06 53.5 69 40.6


User provided reference genes

Program Settings