Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0056100 Salix brachista HOM05D007968 ORTHO05D010203 8.2e-97 357.1 181 100.0
Potri.007G068300 Populus trichocarpa HOM05D007968 ORTHO05D010203 5.0e-70 268.1 181 74.0
Manes.14G011600 Manihot esculenta HOM05D007968 ORTHO05D010203 1.6e-36 156.8 176 44.9
Duzib213G0484 Durio zibethinus HOM05D007968 ORTHO05D010203 3.1e-35 152.5 181 44.2
Thecc.07G160500 Theobroma cacao HOM05D007968 ORTHO05D010203 3.4e-34 149.1 187 46.0
COL.COLO4_38368 Corchorus olitorius HOM05D007968 ORTHO05D010203 2.9e-33 146.0 158 48.7
TWI38G1770 Tripterygium wilfordii HOM05D007968 ORTHO05D010203 3.2e-32 142.5 186 42.5
QL04p077228 Quercus lobata HOM05D007968 ORTHO05D010203 2.7e-31 139.4 172 41.9
Gorai.007G336400 Gossypium raimondii HOM05D007968 ORTHO05D010203 3.9e-30 135.6 170 44.7
Haze_07836 Corylus avellana HOM05D007968 ORTHO05D010203 6.6e-30 134.8 169 40.2
Cfa019410 Carpinus fangiana HOM05D007968 ORTHO05D010203 8.6e-30 134.4 181 38.7
Gohir.D11G300503 Gossypium hirsutum HOM05D007968 ORTHO05D010203 8.6e-30 134.4 170 45.3
CiPaw.11G064900 Carya illinoinensis HOM05D007968 ORTHO05D010203 5.6e-29 131.7 185 39.5
Gohir.A11G291800 Gossypium hirsutum HOM05D007968 ORTHO05D010203 7.3e-29 131.3 170 43.5
Gorai.007G336600 Gossypium raimondii HOM05D007968 ORTHO05D010203 9.5e-29 131.0 172 42.4
Gohir.A11G291900 Gossypium hirsutum HOM05D007968 ORTHO05D010203 2.1e-28 129.8 173 45.1
Gohir.A11G292000 Gossypium hirsutum HOM05D007968 ORTHO05D010203 6.2e-28 128.3 153 45.1
Gohir.D11G300400 Gossypium hirsutum HOM05D007968 ORTHO05D010203 3.1e-27 125.9 172 41.3
Ciclev10006004m.g Citrus clementina HOM05D007968 ORTHO05D010203 4.0e-27 125.6 176 45.5
TAR365G1166 Trochodendron aralioides HOM05D007968 ORTHO05D010203 8.9e-27 124.4 166 42.8
AL6G52570 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 7.5e-26 121.3 174 39.1
AT4G00872 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 2.2e-25 119.8 182 36.8
Carub.0001s4453 Capsella rubella HOM05D007968 ORTHO05D010203 1.1e-24 117.5 187 37.4
THA.LOC104822174 Tarenaya hassleriana HOM05D007968 ORTHO05D010203 1.1e-24 117.5 171 35.1
CARHR043880 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.6e-23 113.6 156 40.4
Carub.0006s3590 Capsella rubella HOM05D007968 ORTHO05D010203 2.7e-23 112.8 173 35.3
BcaB07g33167 Brassica carinata HOM05D007968 ORTHO05D010203 6.0e-23 111.7 187 37.4
CARHR087400 Cardamine hirsuta HOM05D007968 ORTHO05D010203 7.8e-23 111.3 176 36.4
BraSC56t46384Z Brassica rapa HOM05D007968 ORTHO05D010203 3.0e-22 109.4 187 36.4
Thhalv10022116m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 3.0e-22 109.4 155 37.4
AT3G12880 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 3.9e-22 109.0 155 36.8
Sp3g11020 Schrenkiella parvula HOM05D007968 ORTHO05D010203 3.9e-22 109.0 155 38.1
Sp1g41750 Schrenkiella parvula HOM05D007968 ORTHO05D010203 6.6e-22 108.2 185 36.2
CARHR045840 Cardamine hirsuta HOM05D007968 ORTHO05D010203 1.1e-21 107.5 173 36.4
AL3G24550 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 1.5e-21 107.1 155 37.4
A05p36620 Brassica napus HOM05D007968 ORTHO05D010203 3.3e-21 105.9 155 38.7
BraA05t22464Z Brassica rapa HOM05D007968 ORTHO05D010203 3.3e-21 105.9 155 38.7
AL1G64370 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 4.3e-21 105.5 158 36.7
Aa31LG10G150 Aethionema arabicum HOM05D007968 ORTHO05D010203 5.6e-21 105.1 184 32.1
Carub.0003s1224 Capsella rubella HOM05D007968 ORTHO05D010203 7.3e-21 104.8 155 35.5
Thhalv10011943m.g Eutrema salsugineum HOM05D007968 ORTHO05D010203 7.3e-21 104.8 173 36.4
BcaB06g25504 Brassica carinata HOM05D007968 ORTHO05D010203 9.5e-21 104.4 155 37.4
PSO210G7553 Papaver somniferum HOM05D007968 ORTHO05D010203 2.8e-20 102.8 175 34.9
PSO447G0373 Papaver somniferum HOM05D007968 ORTHO05D010203 1.4e-19 100.5 183 33.3
PSO761G0418 Papaver somniferum HOM05D007968 ORTHO05D010203 1.4e-19 100.5 156 38.5
Atru.chr1.195 Acer truncatum HOM05D007968 ORTHO05D010203 1.8e-19 100.1 155 35.5
CANSAT80G0444 Cannabis sativa HOM05D007968 ORTHO05D010203 8.9e-19 97.8 162 35.8
CARHR044320 Cardamine hirsuta HOM05D007968 ORTHO05D010203 4.4e-18 95.5 154 33.8
Gorai.007G336500 Gossypium raimondii HOM05D007968 ORTHO05D010203 4.4e-18 95.5 136 43.4
CARHR045850 Cardamine hirsuta HOM05D007968 ORTHO05D010203 5.8e-18 95.1 170 33.5
BcaC08g43678 Brassica carinata HOM05D007968 ORTHO05D010203 1.3e-17 94.0 158 36.1
Actinidia07366 Actinidia chinensis HOM05D007968 ORTHO05D010203 3.7e-17 92.4 177 31.1
BcaC05g29230 Brassica carinata HOM05D007968 ORTHO05D010203 3.7e-17 92.4 155 35.5
BolC6t36179H Brassica oleracea HOM05D007968 ORTHO05D010203 4.9e-17 92.0 161 35.4
Glyma.08G168633 Glycine max HOM05D007968 ORTHO05D010203 6.4e-17 91.7 156 37.2
Medtr2g067530 Medicago truncatula HOM05D007968 ORTHO05D010203 6.4e-17 91.7 153 30.7
TAR365G0218 Trochodendron aralioides HOM05D007968 ORTHO05D010203 7.1e-16 88.2 160 35.0
Actinidia12776 Actinidia chinensis HOM05D007968 ORTHO05D010203 2.3e-14 83.2 175 29.7
SGA_v2.0_scaffold49G18180 Striga asiatica HOM05D007968 ORTHO05D010203 8.6e-14 81.3 123 42.3
C06p10970 Brassica napus HOM05D007968 ORTHO05D010203 7.3e-13 78.2 153 32.7
Rhsim06G0240300 Rhododendron simsii HOM05D007968 ORTHO05D010203 4.7e-12 75.5 155 29.0
PSO541G6133 Papaver somniferum HOM05D007968 ORTHO05D010203 1.8e-11 73.6 188 28.2
AL7G39610 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 5.2e-11 72.0 149 27.5
AL7G39620 Arabidopsis lyrata HOM05D007968 ORTHO05D010203 5.2e-11 72.0 154 27.3
AT4G15750 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 1.2e-10 70.9 154 29.2
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.9e-09 66.2 122 26.2
AT1G56100 Arabidopsis thaliana HOM05D007968 ORTHO05D010203 3.8e-09 65.9 125 28.8
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 6.4e-09 65.1 152 29.6
EL10Ac1g01806 Beta vulgaris HOM05D004113 ORTHO05D005233 8.4e-09 64.7 144 31.2
Sed0023488 Sechium edule HOM05D019571 ORTHO05D012329 4.2e-08 62.4 137 25.5
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 2.1e-07 60.1 151 29.1
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 2.7e-07 59.7 178 25.3
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 2.7e-07 59.7 178 25.3
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 6.0e-07 58.5 114 28.1
Prupe.6G197400 Prunus persica HOM05D004113 ORTHO05D005233 1.0e-06 57.8 161 25.5
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 1.7e-06 57.0 161 28.0
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 1.7e-06 57.0 171 26.3
Cc07_g18140 Coffea canephora HOM05D004113 ORTHO05D005233 1.7e-06 57.0 165 26.7
PSO210G1810 Papaver somniferum HOM05D007968 ORTHO05D010203 3.9e-06 55.8 103 35.9
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 5.1e-06 55.5 175 25.7
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 6.6e-06 55.1 146 24.7
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 6.6e-06 55.1 121 23.1
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 6.6e-06 55.1 119 28.6
BcaB02g09804 Brassica carinata HOM05D004113 ORTHO05D005233 8.7e-06 54.7 148 27.7
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 8.7e-06 54.7 120 23.3
Rhsim07G0137900 Rhododendron simsii HOM05D009438 ORTHO05D010870 8.7e-06 54.7 143 21.7
PGSC0003DMG400039425 Solanum tuberosum HOM05D003146 ORTHO05D001819 8.7e-06 54.7 122 27.0


User provided reference genes

Program Settings