Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 0.0e+00 1097.0 547 100.0
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 6.3e-294 1013.4 549 92.9
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.5e-202 709.9 562 66.4
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 5.7e-202 708.0 541 69.1
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 5.2e-195 684.9 548 64.8
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 5.7e-194 681.4 548 64.6
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 7.5e-194 681.0 588 60.9
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 1.8e-192 676.4 554 61.9
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.8e-192 676.4 545 63.9
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 7.0e-192 674.5 554 63.2
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 7.0e-192 674.5 549 63.4
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 8.5e-190 667.5 562 62.3
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.2e-189 665.2 551 62.8
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 2.0e-186 656.4 551 62.8
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 9.8e-186 654.1 560 61.4
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.2e-180 637.1 558 60.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.6e-180 636.7 521 63.7
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 4.0e-179 632.1 564 58.9
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 5.2e-179 631.7 556 59.9
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 6.8e-179 631.3 556 59.0
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 3.4e-178 629.0 560 59.5
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 7.5e-178 627.9 554 59.2
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 4.9e-177 625.2 592 56.4
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.6e-175 620.2 548 58.6
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 4.5e-175 618.6 564 58.2
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 1.1e-173 614.0 603 55.1
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.2e-172 610.5 554 57.9
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 4.7e-172 608.6 568 56.3
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 6.1e-172 608.2 556 56.1
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 4.0e-171 605.5 574 57.7
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 5.2e-171 605.1 616 53.2
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 3.4e-170 602.4 578 55.5
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.7e-169 600.1 566 54.4
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.8e-168 596.7 557 56.0
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 3.2e-168 595.9 581 55.1
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 3.2e-168 595.9 561 54.5
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 5.4e-168 595.1 561 54.5
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.2e-167 594.0 544 56.6
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.6e-167 593.6 610 52.6
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 3.5e-167 592.4 553 56.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 3.5e-167 592.4 561 55.4
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.6e-167 592.0 549 54.1
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 5.9e-167 591.7 556 55.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.0e-166 590.9 611 52.7
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.9e-165 586.6 553 55.2
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 4.3e-165 585.5 553 55.9
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 5.6e-165 585.1 553 56.4
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 9.5e-165 584.3 552 54.9
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.8e-163 580.1 573 54.8
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 2.3e-163 579.7 554 54.7
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 3.1e-163 579.3 553 55.3
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 6.8e-163 578.2 560 54.3
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 8.9e-163 577.8 543 55.4
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 1.5e-162 577.0 567 54.1
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.3e-161 573.9 489 62.2
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 4.9e-161 572.0 564 53.9
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 4.9e-161 572.0 658 50.3
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 4.1e-160 568.9 561 52.6
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 7.0e-160 568.2 493 60.0
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.6e-159 567.0 563 52.4
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 3.9e-158 562.4 512 59.8
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.2e-153 546.6 571 51.5
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.4e-152 543.9 583 51.3
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 3.3e-149 532.7 498 56.4
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 8.1e-148 528.1 523 54.1
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.4e-146 522.3 569 50.3
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 2.2e-145 520.0 566 50.9
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 2.3e-142 510.0 570 47.7
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 3.3e-141 506.1 532 51.7
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 8.1e-140 501.5 523 51.1
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 1.3e-134 484.2 430 57.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.3e-133 479.2 486 53.7
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.8e-132 476.5 556 46.8
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 2.5e-125 453.4 512 49.4
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.5e-122 442.6 371 58.5
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 6.7e-118 428.7 552 46.4
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 8.4e-113 411.8 562 42.7
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 3.1e-107 393.3 591 38.9
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.4e-106 389.8 535 41.7
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 7.2e-104 382.1 434 47.9
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.8e-102 377.5 365 57.8
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 3.3e-101 373.2 347 54.2
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 8.2e-100 368.6 375 57.3
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.2e-95 354.8 273 67.0
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 1.4e-91 341.3 266 62.8
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.1e-88 331.6 360 51.9
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 3.2e-88 330.1 435 43.7
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 9.1e-83 312.0 284 53.9
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 5.3e-75 286.2 247 61.9
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 8.8e-70 268.9 283 50.9
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.7e-68 264.6 441 41.5
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.8e-68 263.8 196 63.3
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 5.2e-62 243.0 215 59.1
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 2.3e-49 201.1 239 48.5
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 5.6e-48 196.4 195 55.4
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 5.6e-48 196.4 195 55.4
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 8.9e-46 189.1 149 66.4
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 6.2e-39 166.4 123 60.2
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 8.1e-39 166.0 179 58.1
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.1e-38 165.6 219 45.2
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 3.7e-36 157.1 189 50.3
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 4.7e-31 140.2 103 58.3
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 6.2e-31 139.8 117 50.4
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 3.4e-29 134.0 119 60.5
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.6e-23 114.0 147 46.9
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 3.4e-21 107.5 135 46.7
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 5.6e-16 90.1 149 36.9
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.0e-09 67.8 68 55.9
FAN16G0561 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-06 59.3 49 61.2
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 1.8e-06 58.5 326 23.0


User provided reference genes

Program Settings