Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 1.3e-128 463.0 229 100.0
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 2.4e-101 372.5 229 80.8
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 3.8e-99 365.2 229 79.5
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.3e-94 350.1 222 77.5
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 2.8e-94 349.0 226 76.5
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 1.5e-92 343.2 226 74.8
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 5.9e-92 341.3 223 73.1
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.0e-91 340.5 226 72.1
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.8e-91 338.6 227 72.2
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 6.5e-91 337.8 223 74.4
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 8.5e-91 337.4 227 72.2
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 9.4e-90 334.0 275 61.8
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 7.9e-89 330.9 209 75.1
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.0e-88 330.5 228 72.8
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.0e-88 330.5 228 72.8
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 1.1e-87 327.0 227 72.2
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 7.4e-87 324.3 226 71.7
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 1.3e-86 323.6 228 71.1
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.3e-86 323.6 226 70.8
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 6.3e-86 321.2 224 72.3
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 1.4e-85 320.1 225 71.6
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.8e-85 319.7 234 69.2
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.8e-85 319.7 225 69.8
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 4.1e-85 318.5 230 70.0
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 6.9e-85 317.8 227 71.8
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 6.9e-85 317.8 225 72.4
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.2e-84 317.0 226 69.5
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 1.2e-84 317.0 225 68.0
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 2.6e-84 315.8 223 71.3
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 5.9e-84 314.7 226 67.3
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.0e-83 313.9 228 69.7
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.8e-83 312.0 226 69.0
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 5.0e-83 311.6 225 68.9
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.5e-83 310.8 223 70.4
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 8.5e-83 310.8 215 71.6
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 1.1e-82 310.5 188 79.8
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.1e-82 310.5 223 70.4
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.1e-82 310.5 225 69.8
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.9e-82 309.7 225 68.4
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 2.5e-82 309.3 215 69.3
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 2.5e-82 309.3 215 69.3
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 2.5e-82 309.3 215 69.3
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.5e-82 309.3 223 70.0
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 4.2e-82 308.5 215 69.3
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 7.2e-82 307.8 225 68.9
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 9.4e-82 307.4 215 68.8
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-81 307.0 227 68.7
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.6e-81 306.6 227 68.7
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.1e-81 306.2 214 72.0
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 2.1e-81 306.2 227 67.4
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 4.7e-81 305.1 226 67.7
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 6.1e-81 304.7 214 69.6
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 6.1e-81 304.7 210 71.4
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 7.9e-81 304.3 215 68.8
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 1.0e-80 303.9 224 65.2
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 1.0e-80 303.9 207 70.5
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.4e-80 303.5 214 71.5
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.4e-80 303.5 227 68.3
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 2.3e-80 302.8 215 68.8
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 2.3e-80 302.8 211 68.7
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.0e-80 302.4 225 68.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 3.0e-80 302.4 224 66.5
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 6.7e-80 301.2 207 70.0
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.1e-79 300.4 223 69.5
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 2.6e-79 299.3 215 67.9
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 5.7e-79 298.1 215 67.4
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 7.4e-79 297.7 214 67.8
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.3e-78 297.0 215 67.9
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.3e-78 297.0 208 71.2
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 6.3e-78 294.7 226 64.6
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 1.1e-77 293.9 216 65.3
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.4e-77 293.5 217 68.7
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 5.3e-77 291.6 209 67.5
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 9.1e-77 290.8 225 64.0
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 1.2e-76 290.4 227 64.3
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.5e-76 290.0 226 63.3
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 2.0e-76 289.7 224 63.8
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.7e-75 286.6 228 61.8
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 1.7e-75 286.6 215 66.5
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 2.9e-75 285.8 218 63.3
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 5.0e-75 285.0 218 64.2
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 5.0e-75 285.0 218 64.7
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 5.0e-75 285.0 218 62.8
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 5.0e-75 285.0 218 62.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 8.5e-75 284.3 218 65.1
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.4e-74 283.5 218 66.1
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 1.4e-74 283.5 207 67.6
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 3.2e-74 282.3 205 67.8
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 4.2e-74 282.0 218 64.2
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 5.5e-74 281.6 208 67.8
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 2.7e-73 279.3 202 68.3
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 3.6e-73 278.9 207 67.1
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 8.0e-73 277.7 212 69.3
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 1.0e-72 277.3 212 65.6
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.8e-72 276.6 223 60.5
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.8e-72 276.6 207 66.2
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 3.0e-72 275.8 208 64.4
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.0e-71 273.1 207 66.2
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 5.7e-71 271.6 176 75.0
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 5.7e-71 271.6 198 67.7
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.7e-70 270.0 207 65.7
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 3.7e-70 268.9 214 61.2
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 6.3e-70 268.1 210 62.4
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.1e-69 267.3 210 64.3
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 1.1e-69 267.3 217 59.9
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 1.8e-69 266.5 207 65.2
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 2.4e-69 266.2 224 58.5
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 4.1e-69 265.4 220 63.6
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 5.2e-64 248.4 205 60.0
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.2e-57 227.3 224 54.9
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 2.0e-55 219.9 185 59.5
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.9e-50 203.4 213 46.9
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.1e-49 199.9 134 68.7
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 4.7e-49 198.7 215 45.6
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 3.2e-45 186.0 228 46.9
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 2.7e-44 183.0 203 46.8
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.5e-42 177.2 101 88.1
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 1.7e-35 153.7 213 39.0
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 5.6e-26 122.1 102 56.9
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 4.1e-21 105.9 100 57.0
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 4.7e-17 92.4 62 67.7
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 6.2e-17 92.0 78 60.3
Medtr5g016930 Medicago truncatula HOM05D006615 ORTHO05D007999 9.3e-13 78.2 53 66.0
SEGI_04005 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 1.4e-08 64.3 62 48.4
Psat3g054040 Pisum sativum HOM05D001219 ORTHO05D001017 3.1e-08 63.2 153 28.8
Psat3g054120 Pisum sativum HOM05D001219 ORTHO05D001017 4.0e-08 62.8 153 28.1
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 9.0e-08 61.6 86 33.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-07 60.1 101 35.6
Dinv23311 Davidia involucrata HOM05D001219 ORTHO05D001017 3.4e-07 59.7 121 33.1
EL10Ac1g00777 Beta vulgaris HOM05D002629 ORTHO05D003221 4.4e-07 59.3 221 26.7
Cfa006657 Carpinus fangiana HOM05D002125 ORTHO05D002105 4.4e-07 59.3 131 35.9
SEGI_04733 Sequoiadendron giganteum HOM05D001219 ORTHO05D001017 4.4e-07 59.3 115 31.3
BolC6t40404H Brassica oleracea HOM05D001219 ORTHO05D001017 5.8e-07 58.9 121 31.4
Rhsim01G0030200 Rhododendron simsii HOM05D001219 ORTHO05D001017 5.8e-07 58.9 144 27.1
AagrBONN_evm.TU.Sc2ySwM_228.3066 Anthoceros agrestis HOM05D021880 ORTHO05D026584 7.6e-07 58.5 95 36.8
Medtr3g074550 Medicago truncatula HOM05D001219 ORTHO05D001017 7.6e-07 58.5 126 27.0
Peaxi162Scf00332g00225 Petunia axillaris HOM05D001219 ORTHO05D001017 7.6e-07 58.5 229 27.5
Rhsim01G0030300 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.6e-07 58.5 144 27.1
Psat3g054200 Pisum sativum HOM05D001219 ORTHO05D001017 9.9e-07 58.2 136 30.1
Psat3g054280 Pisum sativum HOM05D001219 ORTHO05D001017 9.9e-07 58.2 158 22.8
Rhsim01G0032000 Rhododendron simsii HOM05D001219 ORTHO05D001017 9.9e-07 58.2 144 27.1
Sp7g13700 Schrenkiella parvula HOM05D002762 ORTHO05D004643 9.9e-07 58.2 134 30.6
BcaC06g33410 Brassica carinata HOM05D002762 ORTHO05D004643 2.2e-06 57.0 103 32.0
C07p47170 Brassica napus HOM05D002762 ORTHO05D004643 2.2e-06 57.0 103 32.0
BolC7t45238H Brassica oleracea HOM05D002762 ORTHO05D004643 2.2e-06 57.0 103 32.0
Psat3g055240 Pisum sativum HOM05D001219 ORTHO05D001017 2.2e-06 57.0 178 27.0
MBI15_g17828_MAGBIO Magnolia biondii HOM05D001219 ORTHO05D001017 2.9e-06 56.6 79 35.4
MD07G1104300 Malus domestica HOM05D002629 ORTHO05D003221 2.9e-06 56.6 198 29.8
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-06 56.6 162 27.2
Psat3g055200 Pisum sativum HOM05D001219 ORTHO05D001017 2.9e-06 56.6 82 34.1
Atru.chr10.2383 Acer truncatum HOM05D001219 ORTHO05D001017 3.8e-06 56.2 58 39.7
CAN.G1577.14 Capsicum annuum HOM05D005359 ORTHO05D006431 3.8e-06 56.2 218 27.1
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-06 56.2 87 36.8
A03p49130 Brassica napus HOM05D002762 ORTHO05D004643 4.9e-06 55.8 103 32.0
BraA03t14008Z Brassica rapa HOM05D002762 ORTHO05D004643 4.9e-06 55.8 103 32.0
Carub.0006s3341 Capsella rubella HOM05D000710 ORTHO05D000336 4.9e-06 55.8 160 28.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 4.9e-06 55.8 88 36.4
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.9e-06 55.8 88 36.4
Phvul.010G159100 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 4.9e-06 55.8 151 27.2
Sed0011616 Sechium edule HOM05D001219 ORTHO05D001017 4.9e-06 55.8 104 30.8
Atru.chr13.159 Acer truncatum HOM05D001993 ORTHO05D009037 6.4e-06 55.5 193 31.6


User provided reference genes

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