Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 3.4e-282 974.5 577 100.0
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 5.1e-217 758.1 500 85.0
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 4.3e-184 648.7 505 72.9
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 5.6e-184 648.3 502 74.1
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 4.0e-182 642.1 500 72.4
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 1.5e-181 640.2 502 71.9
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 7.6e-181 637.9 535 69.7
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 7.6e-181 637.9 502 72.5
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 8.4e-180 634.4 502 73.5
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 1.0e-177 627.5 502 72.1
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 1.0e-177 627.5 502 72.5
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.1e-176 624.0 503 72.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 4.3e-176 622.1 502 71.5
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 1.3e-175 620.5 504 70.8
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 2.2e-175 619.8 501 73.1
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.8e-175 618.6 502 70.7
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.3e-175 618.2 502 71.1
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.4e-174 617.1 514 70.8
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 1.8e-174 616.7 501 71.1
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.8e-174 616.7 501 70.7
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 5.3e-174 615.1 502 70.5
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 5.3e-174 615.1 502 68.1
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 6.9e-174 614.8 502 68.5
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 4.5e-173 612.1 500 70.6
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 1.3e-172 610.5 499 71.5
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.1e-171 607.4 501 69.5
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 1.1e-171 607.4 504 70.4
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 9.3e-171 604.4 502 69.7
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.8e-169 600.1 501 69.3
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 8.8e-169 597.8 501 70.7
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 2.5e-168 596.3 502 70.7
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 7.4e-168 594.7 499 69.7
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 7.4e-168 594.7 538 65.2
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.3e-167 594.0 502 68.3
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 1.7e-167 593.6 503 68.6
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.7e-167 593.6 526 65.2
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 4.1e-166 589.0 502 66.9
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.7e-164 583.6 502 66.5
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 2.2e-164 583.2 500 67.2
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 3.8e-164 582.4 502 68.9
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.1e-163 580.9 500 66.8
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-163 580.5 514 66.7
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.5e-163 579.7 528 65.9
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.2e-163 579.3 514 66.5
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 3.2e-163 579.3 425 76.2
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 4.2e-163 578.9 502 69.1
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 3.9e-161 572.4 502 67.7
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.6e-160 569.7 502 68.3
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 7.4e-160 568.2 502 67.1
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 7.4e-160 568.2 597 62.8
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 9.7e-160 567.8 517 64.6
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 4.8e-159 565.5 502 67.7
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 1.5e-157 560.5 504 67.1
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.6e-157 559.7 502 68.1
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 2.9e-156 556.2 502 67.3
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 1.1e-155 554.3 503 65.2
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 1.1e-155 554.3 503 65.2
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.4e-155 553.9 502 67.3
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.9e-155 553.5 503 65.6
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.9e-155 553.5 503 65.2
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 3.6e-154 549.3 503 64.0
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 4.7e-154 548.9 502 64.3
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 1.4e-153 547.4 503 64.8
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.4e-153 547.4 502 67.3
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 2.3e-153 546.6 502 65.5
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 5.2e-153 545.4 505 65.1
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 6.7e-153 545.0 503 64.4
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 2.0e-152 543.5 504 64.3
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 5.7e-152 542.0 502 64.7
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 5.7e-152 542.0 503 65.6
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.3e-151 540.8 509 63.7
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.3e-151 540.8 504 64.1
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 6.3e-151 538.5 514 62.5
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 4.1e-150 535.8 503 64.6
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 2.9e-148 529.6 425 70.1
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.9e-147 526.9 502 63.9
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.4e-145 520.8 503 62.8
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 3.3e-144 516.2 503 62.2
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.0e-141 506.9 502 59.8
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 5.9e-141 505.4 502 61.4
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 1.0e-140 504.6 427 69.3
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.1e-138 496.9 513 57.9
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.0e-137 492.7 427 66.3
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 6.8e-137 491.9 531 56.9
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.8e-134 483.8 439 65.1
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 2.3e-129 466.8 502 55.0
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 9.8e-128 461.5 504 57.5
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.0e-124 451.4 500 56.0
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.9e-123 447.2 442 62.2
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 3.0e-121 439.9 528 52.7
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 3.4e-112 409.8 501 56.1
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-108 397.9 296 78.4
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 3.0e-108 396.7 436 59.2
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 1.5e-107 394.4 373 64.3
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 2.0e-104 384.0 431 58.0
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 5.8e-104 382.5 519 50.5
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.2e-101 374.8 505 47.3
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 5.6e-99 365.9 298 72.5
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 8.1e-98 362.1 292 73.3
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.2e-96 358.2 298 72.1
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 5.8e-96 355.9 296 72.0
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 7.6e-96 355.5 238 81.5
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 1.7e-92 344.4 329 67.5
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.2e-87 327.4 529 46.1
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 2.4e-81 307.4 220 76.4
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 3.2e-78 297.0 515 42.9
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 8.1e-74 282.3 303 59.7
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.2e-72 278.5 323 57.6
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 1.9e-70 271.2 200 75.5
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 9.3e-70 268.9 200 75.5
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.4e-63 245.7 288 56.2
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 5.1e-60 236.5 238 60.5
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.9e-59 234.6 285 50.9
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 7.4e-59 232.6 162 72.2
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-55 221.9 128 87.5
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 5.0e-55 219.9 128 87.5
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 1.1e-51 208.8 126 84.1
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.3e-50 203.0 403 38.7
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 1.1e-41 175.6 474 37.8
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 8.0e-37 159.5 84 90.5
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 9.1e-33 146.0 212 44.8
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 5.0e-31 140.2 526 28.5
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 2.3e-28 131.3 195 44.6
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 4.8e-26 123.6 284 35.2
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.8e-20 105.1 72 72.2
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 4.0e-20 104.0 87 66.7
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.5e-19 102.1 86 64.0
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 3.4e-19 100.9 76 73.7
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.4e-19 100.5 80 68.8
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.7e-19 100.1 66 75.8
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 6.3e-18 96.7 79 69.6
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.5e-16 90.9 76 69.7
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.5e-16 90.5 64 75.0
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.4e-12 79.0 254 32.3
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.5e-11 75.5 50 74.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 1.7e-07 62.0 139 30.9
Actinidia12052 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.3e-06 57.8 45 64.4
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 9.5e-06 56.2 88 35.2


User provided reference genes

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