Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 1.3e-123 446.4 231 100.0
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 2.9e-91 339.0 231 81.8
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 4.3e-66 255.4 228 63.6
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 1.6e-65 253.4 226 63.3
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 8.0e-65 251.1 214 66.4
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 1.4e-64 250.4 231 61.9
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 1.8e-64 250.0 233 63.1
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.3e-64 249.6 229 61.1
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 2.3e-64 249.6 214 63.6
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 4.0e-64 248.8 230 63.9
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 5.2e-64 248.4 259 57.5
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 6.8e-64 248.1 229 63.3
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 1.2e-63 247.3 228 62.3
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 1.5e-63 246.9 214 65.4
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 3.4e-63 245.7 230 62.6
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 4.4e-63 245.4 206 65.5
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 1.3e-62 243.8 243 63.0
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.7e-62 243.4 215 62.3
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 1.7e-62 243.4 226 62.8
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 2.2e-62 243.0 218 61.5
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 2.9e-62 242.7 228 59.2
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 8.3e-62 241.1 229 62.4
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 8.3e-62 241.1 223 60.5
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.1e-61 240.7 229 61.1
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 1.1e-61 240.7 229 61.1
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 1.4e-61 240.4 230 59.6
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 2.4e-61 239.6 230 62.2
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 3.2e-61 239.2 228 56.1
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 4.1e-61 238.8 233 61.8
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 5.4e-61 238.4 226 61.9
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 7.0e-61 238.0 233 58.4
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 1.6e-60 236.9 228 58.3
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 2.1e-60 236.5 229 59.0
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 2.1e-60 236.5 225 60.9
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 2.7e-60 236.1 225 59.1
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 3.5e-60 235.7 229 59.8
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 4.6e-60 235.3 205 63.4
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 4.6e-60 235.3 220 58.6
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 7.8e-60 234.6 229 62.9
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 7.8e-60 234.6 224 59.8
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 1.0e-59 234.2 233 59.2
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 1.3e-59 233.8 237 60.3
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 2.3e-59 233.0 229 57.2
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 3.0e-59 232.6 229 58.5
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 6.6e-59 231.5 220 60.0
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 1.1e-58 230.7 228 57.0
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 1.1e-58 230.7 218 58.3
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 1.1e-58 230.7 229 57.6
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 1.9e-58 229.9 190 65.3
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 2.5e-58 229.6 225 59.1
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 3.3e-58 229.2 228 57.9
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 5.6e-58 228.4 213 59.2
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 7.3e-58 228.0 227 59.0
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 1.6e-57 226.9 201 63.2
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 2.8e-57 226.1 224 58.9
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 1.8e-56 223.4 217 59.9
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 3.1e-56 222.6 222 58.1
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 8.9e-56 221.1 247 51.4
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 5.8e-55 218.4 218 57.3
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 7.5e-55 218.0 228 57.5
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 9.9e-55 217.6 199 57.3
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 2.9e-54 216.1 224 56.2
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 4.9e-54 215.3 223 54.7
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 6.4e-54 214.9 224 55.8
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 8.3e-54 214.5 217 55.3
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 1.4e-53 213.8 223 54.3
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 2.4e-53 213.0 206 56.3
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 5.4e-53 211.8 205 58.0
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 9.2e-53 211.1 233 53.2
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 1.2e-52 210.7 230 56.1
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 2.1e-52 209.9 216 56.5
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 6.0e-52 208.4 214 56.5
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 1.3e-51 207.2 232 52.2
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 5.1e-51 205.3 223 53.8
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 1.1e-50 204.1 222 55.9
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 4.7e-49 198.7 232 50.9
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 1.5e-47 193.7 224 56.7
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 2.0e-47 193.4 190 54.7
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 2.6e-47 193.0 204 52.9
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 7.6e-47 191.4 174 61.5
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 2.9e-46 189.5 191 57.6
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 3.8e-46 189.1 205 52.2
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 3.8e-46 189.1 164 61.6
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 2.4e-45 186.4 213 48.8
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 1.7e-43 180.3 196 55.1
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 4.4e-39 165.6 180 53.3
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 3.2e-37 159.5 182 50.0
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 1.0e-35 154.5 143 58.0
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 1.1e-34 151.0 139 58.3
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 2.5e-34 149.8 172 54.7
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 4.3e-34 149.1 235 42.6
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 5.6e-34 148.7 144 57.6
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 1.1e-32 144.4 218 42.2
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 4.6e-28 129.0 98 69.4
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 7.9e-28 128.3 205 42.4
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 1.0e-27 127.9 198 37.4
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 3.9e-27 125.9 131 54.2
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 4.3e-26 122.5 114 58.8
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 8.1e-25 118.2 109 57.8
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 3.2e-21 106.3 195 39.5
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.2e-20 104.4 126 49.2
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 8.4e-14 81.6 171 32.7
vmacro17948 Vaccinium macrocarpon HOM05D007198 ORTHO05D008969 2.7e-12 76.6 78 56.4
Ah.03g144920 Amaranthus hybridus HOM05D007198 ORTHO05D008969 4.6e-12 75.9 84 53.6
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 7.9e-12 75.1 135 36.3
Hund16330 Selenicereus undatus HOM05D007198 ORTHO05D008969 6.7e-11 72.0 47 72.3
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 4.3e-10 69.3 93 46.2
MD07G1022300 Malus domestica HOM05D007198 ORTHO05D008969 2.8e-09 66.6 47 68.1
Cre01.g037900 Chlamydomonas reinhardtii HOM05D007198 ORTHO05D008969 3.7e-09 66.2 227 26.4
RcHm_v2.0_Chr3g0472951 Rosa chinensis HOM05D007198 ORTHO05D008969 1.4e-08 64.3 55 58.2
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 1.5e-07 60.8 85 42.4


User provided reference genes

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