Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0034600 Salix brachista HOM05D037871 ORTHO05D010755 8.3e-103 377.1 197 100.0
Potri.007G038600 Populus trichocarpa HOM05D037871 ORTHO05D010755 5.4e-70 268.1 171 84.2
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 3.7e-10 69.3 162 31.5
Nn5g29352 Nelumbo nucifera HOM05D000529 ORTHO05D000472 4.8e-10 68.9 140 32.9
COL.COLO4_11346 Corchorus olitorius HOM05D015225 ORTHO05D009609 4.1e-09 65.9 131 33.6
Duzib264G0157 Durio zibethinus HOM05D000529 ORTHO05D000472 4.1e-09 65.9 140 32.9
Haze_15455 Corylus avellana HOM05D008738 ORTHO05D010755 9.1e-09 64.7 141 31.9
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 2.6e-08 63.2 139 31.7
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 5.9e-08 62.0 139 30.9
Haze_15451 Corylus avellana HOM05D000529 ORTHO05D000472 5.9e-08 62.0 135 30.4
Duzib147G1638 Durio zibethinus HOM05D000529 ORTHO05D000472 5.9e-08 62.0 133 30.8
Gohir.D03G020050 Gossypium hirsutum HOM05D015225 ORTHO05D009609 7.7e-08 61.6 129 32.6
Gorai.003G021200 Gossypium raimondii HOM05D015225 ORTHO05D009609 7.7e-08 61.6 129 32.6
Oeu005309.1 Olea europaea HOM05D000529 ORTHO05D000472 7.7e-08 61.6 117 34.2
Duzib264G0733 Durio zibethinus HOM05D015225 ORTHO05D009609 1.0e-07 61.2 131 34.4
QL06p043096 Quercus lobata HOM05D000529 ORTHO05D000472 1.0e-07 61.2 131 32.1
QL06p043133 Quercus lobata HOM05D000529 ORTHO05D000472 1.0e-07 61.2 131 32.1
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 1.3e-07 60.8 178 28.1
Duzib264G0020 Durio zibethinus HOM05D000529 ORTHO05D000472 1.7e-07 60.5 131 31.3
QL06p043050 Quercus lobata HOM05D000529 ORTHO05D000472 2.2e-07 60.1 131 31.3
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 2.9e-07 59.7 163 25.8
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 2.9e-07 59.7 139 30.2
Nn5g29351 Nelumbo nucifera HOM05D000529 ORTHO05D000472 2.9e-07 59.7 139 32.4
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 3.8e-07 59.3 139 31.7
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 3.8e-07 59.3 161 28.0
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 5.0e-07 58.9 139 28.8
GSVIVG01007144001 Vitis vinifera HOM05D000529 ORTHO05D000472 5.0e-07 58.9 126 31.0
Cpa.g.sc6.402 Carica papaya HOM05D000529 ORTHO05D000472 6.5e-07 58.5 133 29.3
QL06p043275 Quercus lobata HOM05D037871 ORTHO05D010755 6.5e-07 58.5 157 28.7
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 8.5e-07 58.2 162 27.2
Cfa021022 Carpinus fangiana HOM05D000529 ORTHO05D010311 8.5e-07 58.2 132 32.6
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 8.5e-07 58.2 134 30.6
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-06 57.8 139 28.8
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-06 57.8 139 29.5
Cc07_g05700 Coffea canephora HOM05D000529 ORTHO05D000472 1.1e-06 57.8 152 28.9
QL06p043260 Quercus lobata HOM05D000529 ORTHO05D000472 1.1e-06 57.8 149 28.9
Thecc.01G050200 Theobroma cacao HOM05D015225 ORTHO05D009609 1.1e-06 57.8 131 31.3
GSVIVG01003565001 Vitis vinifera HOM05D000529 ORTHO05D000472 1.1e-06 57.8 137 31.4
CiPaw.02G010900 Carya illinoinensis HOM05D008738 ORTHO05D010755 1.5e-06 57.4 132 31.8
Gorai.007G210000 Gossypium raimondii HOM05D000529 ORTHO05D000472 1.5e-06 57.4 131 32.1
QL06p042852 Quercus lobata HOM05D000529 ORTHO05D000472 2.5e-06 56.6 133 29.3
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 3.2e-06 56.2 143 26.6
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 3.2e-06 56.2 177 23.7
CiPaw.02G011200 Carya illinoinensis HOM05D008738 ORTHO05D010755 3.2e-06 56.2 126 31.7
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 4.2e-06 55.8 139 29.5
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 5.5e-06 55.5 139 27.3
FAN23G0627 Fragaria x ananassa HOM05D000046 ORTHO05D020739 5.5e-06 55.5 116 34.5
Gohir.A11G189400 Gossypium hirsutum HOM05D000529 ORTHO05D000472 5.5e-06 55.5 131 31.3
Gohir.D11G196100 Gossypium hirsutum HOM05D000529 ORTHO05D000472 5.5e-06 55.5 131 31.3
QL03p072647 Quercus lobata HOM05D000529 ORTHO05D000472 5.5e-06 55.5 110 30.9
QL03p072768 Quercus lobata HOM05D000529 ORTHO05D000472 5.5e-06 55.5 110 30.9
GSVIVG01003569001 Vitis vinifera HOM05D000529 ORTHO05D019823 5.5e-06 55.5 126 31.0
FAN26G1753 Fragaria x ananassa HOM05D000046 ORTHO05D020739 7.2e-06 55.1 116 34.5
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 7.2e-06 55.1 137 27.0
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 9.4e-06 54.7 139 28.1
FAN26G3207 Fragaria x ananassa HOM05D000529 ORTHO05D000472 9.4e-06 54.7 123 32.5
TWI09G1247 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 9.4e-06 54.7 133 27.1


User provided reference genes

Program Settings