Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 3.3e-95 351.7 176 100.0
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.7e-86 322.8 176 89.8
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 3.8e-59 231.9 158 72.8
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 8.9e-56 220.7 160 67.5
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 8.3e-54 214.2 161 66.5
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.1e-53 213.8 163 66.9
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 2.7e-52 209.1 163 66.9
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 5.0e-51 204.9 162 65.4
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 2.1e-49 199.5 163 63.2
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.8e-48 196.4 162 62.3
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.8e-48 196.4 159 62.3
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.3e-48 196.1 159 62.9
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.0e-48 195.3 159 62.9
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 6.8e-48 194.5 165 61.8
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.5e-47 193.4 162 61.1
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 2.9e-46 189.1 172 59.3
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 3.7e-46 188.7 165 57.0
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.9e-45 186.4 162 60.5
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.9e-45 186.4 160 59.4
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.4e-45 186.0 167 59.9
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.1e-45 185.3 165 60.0
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 7.0e-45 184.5 163 58.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.2e-44 183.7 159 56.6
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.5e-44 182.2 167 58.7
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 3.5e-44 182.2 163 56.4
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 4.6e-44 181.8 166 54.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.7e-43 179.9 160 58.1
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 5.0e-43 178.3 158 59.5
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.9e-42 176.4 163 55.8
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.3e-42 175.6 160 59.4
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 7.3e-42 174.5 162 55.6
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.6e-41 173.3 165 59.4
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 5.2e-40 168.3 152 60.5
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 6.8e-40 167.9 156 57.1
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.5e-39 166.8 164 54.9
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 4.4e-39 165.2 158 53.8
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 3.7e-38 162.2 164 56.1
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.9e-37 159.8 115 68.7
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.4e-37 159.5 157 55.4
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 3.9e-35 152.1 130 60.0
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 5.1e-35 151.8 158 53.8
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 5.1e-35 151.8 133 58.6
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 8.6e-35 151.0 161 51.6
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.9e-34 149.8 132 59.8
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.9e-34 149.8 165 50.3
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.6e-33 146.7 159 48.4
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 3.6e-33 145.6 156 48.7
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.1e-32 144.1 157 52.2
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 1.1e-32 144.1 161 50.9
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 4.0e-32 142.1 157 48.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 8.9e-32 141.0 131 54.2
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.2e-31 140.6 156 51.3
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 2.6e-31 139.4 176 47.7
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 3.4e-31 139.0 161 50.3
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 4.4e-31 138.7 150 50.0
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 4.4e-31 138.7 159 47.2
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 2.9e-30 136.0 183 46.4
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.9e-29 133.3 159 48.4
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.4e-29 132.9 164 48.8
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.5e-28 129.0 163 49.1
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 3.9e-27 125.6 147 51.0
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 6.6e-27 124.8 156 44.9
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 8.7e-27 124.4 152 42.1
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 8.7e-27 124.4 120 56.7
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 8.1e-25 117.9 137 48.9
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.1e-24 117.5 134 46.3
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 2.4e-24 116.3 137 48.9
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 3.1e-24 115.9 136 46.3
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 2.6e-23 112.8 109 57.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.7e-22 110.2 110 49.1
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.4e-21 107.1 165 42.4
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 9.3e-21 104.4 94 60.6
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.2e-20 104.0 160 40.6
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.6e-20 103.6 136 45.6
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 2.1e-20 103.2 135 45.9
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 6.0e-20 101.7 80 61.2
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 4.3e-18 95.5 133 45.1
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.3e-17 94.0 101 47.5
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 6.2e-17 91.7 107 48.6
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 9.0e-16 87.8 158 38.6
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 9.0e-08 61.2 117 35.9


User provided reference genes

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