Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.9e-60 236.1 164 100.0
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 8.3e-48 194.1 164 87.8
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.0e-42 177.2 167 81.4
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 5.8e-41 171.4 164 79.3
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.3e-40 170.2 164 77.4
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.7e-40 169.9 164 77.4
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.7e-40 168.7 164 77.4
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.4e-39 166.0 164 76.8
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.4e-39 166.0 165 78.2
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 2.4e-39 166.0 163 78.5
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.7e-38 162.5 165 77.0
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 4.6e-38 161.8 165 77.6
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 5.0e-37 158.3 166 77.1
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 8.6e-37 157.5 168 76.8
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.1e-36 157.1 166 72.9
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.9e-36 156.4 167 75.4
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 5.6e-36 154.8 165 74.5
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 5.6e-36 154.8 164 75.0
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 9.5e-36 154.1 164 75.6
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 6.2e-35 151.4 164 71.3
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 6.2e-35 151.4 166 75.3
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.4e-34 150.2 135 85.9
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.8e-34 149.8 166 72.9
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.3e-34 149.4 166 73.5
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.3e-34 149.4 166 73.5
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.0e-34 148.7 144 79.2
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 4.0e-34 148.7 165 72.1
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 6.8e-34 147.9 163 72.4
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 6.8e-34 147.9 164 75.0
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 8.9e-34 147.5 167 76.0
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 8.9e-34 147.5 167 71.9
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.2e-33 147.1 167 73.7
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.5e-33 146.7 165 72.1
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 2.0e-33 146.4 167 73.7
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 2.6e-33 146.0 163 73.6
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 2.6e-33 146.0 164 70.7
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.6e-33 146.0 165 73.3
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 2.6e-33 146.0 162 74.7
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.6e-33 146.0 135 84.4
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 3.4e-33 145.6 133 85.7
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 4.4e-33 145.2 164 76.2
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 5.8e-33 144.8 168 73.8
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 7.5e-33 144.4 135 83.7
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 7.5e-33 144.4 164 72.6
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 1.7e-32 143.3 164 72.6
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.2e-32 142.9 164 75.0
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 2.2e-32 142.9 165 70.3
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.9e-32 142.5 162 73.5
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 3.7e-32 142.1 168 72.6
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 3.7e-32 142.1 168 72.6
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 3.7e-32 142.1 164 72.6
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 3.7e-32 142.1 165 72.1
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 6.4e-32 141.4 163 73.0
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.9e-31 139.8 115 90.4
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.9e-31 139.8 115 90.4
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.9e-31 139.8 138 79.7
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 3.2e-31 139.0 164 75.0
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 5.4e-31 138.3 127 85.0
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 7.0e-31 137.9 164 68.9
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 7.0e-31 137.9 164 72.6
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 167 69.5
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.6e-30 136.7 164 74.4
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.1e-30 136.3 128 85.2
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.1e-30 136.3 165 70.9
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 4.6e-30 135.2 167 71.3
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 4.6e-30 135.2 168 70.2
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 4.6e-30 135.2 164 68.9
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.7e-29 133.3 165 68.5
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.7e-29 133.3 164 68.3
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 3.9e-29 132.1 129 82.2
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 5.0e-29 131.7 172 69.8
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 5.0e-29 131.7 164 68.9
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 8.6e-29 131.0 100 71.0
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.9e-28 129.8 127 64.6
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 4.3e-28 128.6 127 81.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 7.3e-28 127.9 165 69.1
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.2e-27 127.1 168 70.2
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.2e-27 127.1 163 68.7
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 6.2e-27 124.8 127 67.7
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.1e-26 124.0 124 78.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.4e-26 123.6 162 58.0
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 2.3e-26 122.9 116 80.2
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 7.5e-25 117.9 140 73.6
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.2e-24 116.3 125 80.0
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 8.3e-24 114.4 101 62.4
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.1e-23 114.0 119 79.8
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 2.4e-23 112.8 160 67.5
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.4e-23 112.8 113 78.8
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 3.2e-23 112.5 117 80.3
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 7.8e-22 107.8 115 51.3
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 8.6e-21 104.4 100 61.0
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.9e-20 103.2 117 75.2
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 6.8e-18 94.7 139 64.7
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.2e-17 94.0 140 66.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.3e-16 90.5 126 69.8
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.9e-16 89.4 128 44.5
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 4.2e-15 85.5 89 73.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.6e-14 83.6 120 65.0
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 4.3e-12 75.5 119 38.7
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 7.3e-12 74.7 125 64.8
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.0e-09 66.6 65 50.8
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.0e-09 66.6 53 62.3
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 6.0e-06 55.1 33 81.8


User provided reference genes

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