Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0019900 Salix brachista HOM05D001900 ORTHO05D050562 3.2e-85 318.5 160 100.0
Potri.007G022950 Populus trichocarpa HOM05D001900 ORTHO05D050562 1.4e-67 260.0 160 83.1
Potri.005G120901 Populus trichocarpa HOM05D001900 ORTHO05D003003 1.2e-50 203.8 145 76.6
Manes.01G137000 Manihot esculenta HOM05D001900 ORTHO05D003003 2.2e-25 119.8 175 46.9
Thecc.01G032400 Theobroma cacao HOM05D001900 ORTHO05D003003 2.4e-16 89.7 173 41.6
Dinv13503 Davidia involucrata HOM05D001900 ORTHO05D003003 4.1e-16 89.0 158 44.3
Gohir.D03G013400 Gossypium hirsutum HOM05D001900 ORTHO05D003003 5.4e-16 88.6 139 46.0
Gorai.003G013700 Gossypium raimondii HOM05D001900 ORTHO05D003003 1.6e-15 87.0 139 45.3
Cpa.g.sc6.141 Carica papaya HOM05D001900 ORTHO05D003003 2.7e-15 86.3 144 44.4
Duzib147G0909 Durio zibethinus HOM05D001900 ORTHO05D003003 2.7e-15 86.3 145 44.1
Actinidia36571 Actinidia chinensis HOM05D001900 ORTHO05D003003 3.5e-15 85.9 136 46.3
Gohir.A02G166600 Gossypium hirsutum HOM05D001900 ORTHO05D003003 4.6e-15 85.5 134 46.3
Duzib264G0068 Durio zibethinus HOM05D001900 ORTHO05D003003 1.7e-14 83.6 139 46.8
MD15G1258100 Malus domestica HOM05D001900 ORTHO05D003003 5.1e-14 82.0 147 44.2
MD02G1144400 Malus domestica HOM05D001900 ORTHO05D003003 6.6e-14 81.6 149 43.6
Prupe.7G157200 Prunus persica HOM05D001900 ORTHO05D003003 6.6e-14 81.6 137 45.3
Haze_15069 Corylus avellana HOM05D001900 ORTHO05D003003 3.3e-13 79.3 110 50.9
TWI53G0889 Tripterygium wilfordii HOM05D001900 ORTHO05D003003 3.3e-13 79.3 150 40.0
Dinv40001 Davidia involucrata HOM05D001900 ORTHO05D003003 4.3e-13 79.0 148 42.6
Eucgr.H03317 Eucalyptus grandis HOM05D001900 ORTHO05D003003 2.8e-12 76.3 148 39.9
CSS0012592 Camellia sinensis var. sinensis HOM05D001900 ORTHO05D003003 4.7e-12 75.5 141 44.7
MBI10_g18272_MAGBIO Magnolia biondii HOM05D001900 ORTHO05D003003 1.1e-11 74.3 157 42.0
Gohir.D12G063800 Gossypium hirsutum HOM05D001900 ORTHO05D003003 2.4e-11 73.2 157 35.7
Gorai.008G067000 Gossypium raimondii HOM05D001900 ORTHO05D003003 3.1e-11 72.8 157 35.7
GSVIVG01018933001 Vitis vinifera HOM05D001900 ORTHO05D003003 5.2e-11 72.0 126 46.8
FAN28G0904 Fragaria x ananassa HOM05D001900 ORTHO05D003003 6.8e-11 71.6 112 46.4
QL06p046951 Quercus lobata HOM05D001900 ORTHO05D003003 6.8e-11 71.6 147 40.8
FAN23G0213 Fragaria x ananassa HOM05D001900 ORTHO05D003003 1.2e-10 70.9 94 50.0
RcHm_v2.0_Chr2g0101071 Rosa chinensis HOM05D001900 ORTHO05D003003 1.2e-10 70.9 95 51.6
Gohir.A12G063900 Gossypium hirsutum HOM05D001900 ORTHO05D003003 1.5e-10 70.5 107 42.1
Cfa004333 Carpinus fangiana HOM05D001900 ORTHO05D003003 2.6e-10 69.7 140 42.9
Haze_15073 Corylus avellana HOM05D000342 ORTHO05D000217 2.6e-10 69.7 115 47.8
TPR.G2395 Trifolium pratense HOM05D001900 ORTHO05D003003 2.6e-10 69.7 130 40.8
TAR381G1572 Trochodendron aralioides HOM05D001900 ORTHO05D003003 2.6e-10 69.7 140 41.4
Cc07_g09770 Coffea canephora HOM05D001900 ORTHO05D003003 4.4e-10 68.9 124 42.7
Glyma.01G172500 Glycine max HOM05D001900 ORTHO05D003003 5.8e-10 68.6 149 36.9
CiPaw.02G019500 Carya illinoinensis HOM05D001900 ORTHO05D003003 7.6e-10 68.2 144 43.1
COL.COLO4_22048 Corchorus olitorius HOM05D001900 ORTHO05D003003 9.9e-10 67.8 121 44.6
TAR625G0256 Trochodendron aralioides HOM05D001900 ORTHO05D003003 1.3e-09 67.4 147 37.4
Medtr5g020810 Medicago truncatula HOM05D001900 ORTHO05D003003 1.7e-09 67.0 146 37.7
VMungo1215G0025 Vigna mungo HOM05D001900 ORTHO05D003003 1.7e-09 67.0 140 38.6
FAN26G2681 Fragaria x ananassa HOM05D001900 ORTHO05D003003 3.8e-09 65.9 93 48.4
Phvul.002G032800 Phaseolus vulgaris HOM05D001900 ORTHO05D003003 4.9e-09 65.5 136 37.5
Ciclev10024944m.g Citrus clementina HOM05D001900 ORTHO05D003003 6.4e-09 65.1 141 40.4
FvH4_1g12990 Fragaria vesca HOM05D001900 ORTHO05D003003 1.1e-08 64.3 93 47.3
CANSAT01G3259 Cannabis sativa HOM05D001900 ORTHO05D003003 1.9e-08 63.5 89 51.7
FAN19G1137 Fragaria x ananassa HOM05D001900 ORTHO05D003003 1.9e-08 63.5 112 42.9
Psat2g158040 Pisum sativum HOM05D001900 ORTHO05D003003 1.9e-08 63.5 137 40.1
CsaV3_6G046400 Cucumis sativus L. HOM05D001900 ORTHO05D003003 7.1e-08 61.6 133 36.8
Lj2C455T8 Lonicera japonica HOM05D001900 ORTHO05D003003 7.1e-08 61.6 138 42.0
PGR102G2818 Punica granatum HOM05D001900 ORTHO05D003003 7.1e-08 61.6 152 38.2
Sed0014260 Sechium edule HOM05D001900 ORTHO05D003003 1.2e-07 60.8 131 38.2
HanXRQChr11g0325471 Helianthus annuus HOM05D001900 ORTHO05D003003 1.6e-07 60.5 146 39.0
MELO3C007837.2 Cucumis melo HOM05D001900 ORTHO05D003003 2.1e-07 60.1 133 36.1
Ca_24869_v3 Cicer arietinum L. HOM05D001900 ORTHO05D003003 3.5e-07 59.3 134 41.0
Aqoxy6G01148 Aquilegia oxysepala HOM05D001900 ORTHO05D003003 4.6e-07 58.9 176 35.8
ClCG01G019690 Citrullus lanatus HOM05D001900 ORTHO05D003003 4.6e-07 58.9 133 36.1
Glyma.11G070700 Glycine max HOM05D001900 ORTHO05D003003 6.0e-07 58.5 143 35.7
ECA232G3627 Erigeron canadensis HOM05D002962 ORTHO05D003003 1.3e-06 57.4 131 37.4
Lsat_1_v5_gn_4_152521 Lactuca sativa HOM05D001900 ORTHO05D003003 3.0e-06 56.2 127 37.0
Oeu025184.1 Olea europaea HOM05D001900 ORTHO05D003003 3.0e-06 56.2 134 38.8


User provided reference genes

Program Settings