Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 4.2e-96 354.8 187 100.0
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 2.1e-63 246.1 132 91.7
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 1.5e-56 223.4 191 66.0
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.1e-55 219.5 195 65.6
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 5.2e-54 214.9 191 66.0
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 6.8e-54 214.5 195 64.6
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 8.8e-54 214.2 185 66.5
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 8.8e-54 214.2 185 66.5
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 1.5e-53 213.4 195 62.6
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 2.6e-53 212.6 193 63.2
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 3.4e-53 212.2 190 65.8
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.8e-52 209.1 191 64.9
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 6.3e-52 208.0 194 62.9
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 8.3e-52 207.6 192 61.5
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 8.3e-52 207.6 196 64.8
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 8.3e-52 207.6 191 64.4
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 1.1e-51 207.2 191 64.4
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 1.8e-51 206.5 188 65.4
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 2.4e-51 206.1 194 62.9
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 5.4e-51 204.9 194 64.4
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 7.0e-51 204.5 192 64.1
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 1.6e-50 203.4 195 62.6
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.7e-50 202.6 191 63.4
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 4.5e-50 201.8 196 61.2
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 7.7e-50 201.1 190 65.8
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 1.0e-49 200.7 191 63.4
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.0e-49 200.7 191 63.4
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.3e-49 200.3 195 62.1
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 2.9e-49 199.1 191 64.4
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 2.9e-49 199.1 193 60.6
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 5.0e-49 198.4 191 62.3
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 5.0e-49 198.4 191 63.4
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 6.5e-49 198.0 193 60.6
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 6.5e-49 198.0 196 61.2
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 6.5e-49 198.0 188 62.2
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 1.1e-48 197.2 187 60.4
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 1.1e-48 197.2 194 60.8
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 1.5e-48 196.8 194 60.3
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 1.5e-48 196.8 187 61.5
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 1.5e-48 196.8 191 61.3
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 2.5e-48 196.1 186 61.3
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 2.5e-48 196.1 187 61.5
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 2.5e-48 196.1 194 60.3
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 3.2e-48 195.7 187 61.5
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 3.2e-48 195.7 187 60.4
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 5.5e-48 194.9 192 58.9
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 5.5e-48 194.9 189 61.9
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 7.2e-48 194.5 190 59.5
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 7.2e-48 194.5 187 61.0
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 7.2e-48 194.5 187 61.0
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 9.4e-48 194.1 194 60.8
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.2e-47 193.7 187 61.5
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.2e-47 193.7 187 61.5
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 1.2e-47 193.7 185 62.2
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 1.6e-47 193.4 194 58.2
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 1.6e-47 193.4 194 62.4
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 2.7e-47 192.6 192 58.9
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 2.7e-47 192.6 189 61.4
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 3.6e-47 192.2 187 61.0
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 3.6e-47 192.2 195 59.0
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 4.7e-47 191.8 194 58.8
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 4.7e-47 191.8 196 58.7
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 6.1e-47 191.4 199 59.8
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 6.1e-47 191.4 187 58.8
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.0e-46 190.7 186 58.6
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.0e-46 190.7 192 59.9
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 2.3e-46 189.5 183 62.3
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 5.2e-46 188.3 188 56.9
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 5.2e-46 188.3 191 59.2
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 6.8e-46 188.0 187 59.4
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 6.8e-46 188.0 194 61.3
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 1.2e-45 187.2 186 59.1
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 3.4e-45 185.7 187 61.0
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 3.4e-45 185.7 189 60.8
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 4.4e-45 185.3 182 61.5
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 5.7e-45 184.9 192 57.8
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.3e-44 183.7 192 61.5
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 3.7e-44 182.2 187 61.5
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 8.3e-44 181.0 186 56.5
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 1.4e-43 180.3 187 58.3
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 4.1e-43 178.7 187 56.7
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 4.1e-43 178.7 185 56.2
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 5.4e-43 178.3 186 56.5
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 1.2e-42 177.2 197 56.9
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 3.5e-42 175.6 194 55.2
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 4.5e-42 175.3 142 66.9
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 5.0e-41 171.8 202 54.0
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 6.6e-41 171.4 187 58.8
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 4.3e-40 168.7 194 54.6
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 1.6e-39 166.8 190 55.3
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 2.3e-38 162.9 188 53.7
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 4.0e-38 162.2 192 55.2
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 1.2e-37 160.6 124 70.2
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 2.0e-37 159.8 192 54.7
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 2.6e-37 159.5 238 45.0
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 7.5e-37 157.9 138 63.8
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 6.4e-36 154.8 196 51.0
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 1.4e-35 153.7 202 51.5
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 1.4e-35 153.7 122 67.2
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 3.2e-35 152.5 199 50.3
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 5.4e-35 151.8 186 50.5
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 2.7e-34 149.4 187 51.9
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 5.6e-32 141.7 189 51.3
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 9.5e-32 141.0 199 48.7
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 6.2e-31 138.3 246 42.7
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 1.2e-29 134.0 151 55.6
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.4e-29 132.1 165 53.3
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 4.4e-29 132.1 188 46.3
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 9.8e-29 131.0 168 50.0
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 1.4e-27 127.1 140 53.6
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 1.9e-27 126.7 186 46.2
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 1.9e-27 126.7 135 53.3
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 3.2e-27 125.9 89 77.5
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.0e-26 123.2 169 47.3
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 2.7e-26 122.9 188 49.5
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 4.6e-26 122.1 94 73.4
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 7.8e-26 121.3 190 50.0
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 7.8e-26 121.3 124 57.3
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 5.6e-24 115.2 124 55.6
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 2.1e-23 113.2 178 43.8
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 2.8e-23 112.8 131 52.7
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 3.6e-23 112.5 131 53.4
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 1.4e-19 100.5 115 48.7
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 3.0e-17 92.8 96 56.2
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.5e-13 80.5 118 45.8
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.4e-13 79.3 64 75.0
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 3.4e-13 79.3 126 45.2
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 2.2e-12 76.6 67 58.2
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 1.6e-10 70.5 77 51.9
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 3.5e-10 69.3 81 51.9
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 7.8e-10 68.2 100 43.0
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 3.9e-09 65.9 80 48.8
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 3.9e-09 65.9 80 48.8
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 7.3e-08 61.6 141 36.9
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 1.2e-07 60.8 91 45.1
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 2.1e-07 60.1 62 53.2
Mapoly0001s0539 Marchantia polymorpha HOM05D024399 ORTHO05D023494 2.4e-06 56.6 87 43.7


User provided reference genes

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