Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 5.7e-95 350.9 178 100.0
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 3.2e-77 292.0 179 86.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 9.3e-53 210.7 177 67.2
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 5.1e-51 204.9 176 64.8
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 2.5e-50 202.6 196 62.2
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 7.4e-50 201.1 137 79.6
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 2.6e-47 192.6 180 64.4
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 3.4e-47 192.2 180 61.1
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 4.5e-47 191.8 179 63.7
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 4.5e-47 191.8 180 61.1
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 4.5e-47 191.8 179 61.5
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 5.8e-47 191.4 178 65.2
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 7.6e-47 191.0 124 80.6
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.7e-46 189.9 178 64.6
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.4e-45 186.0 195 58.5
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 3.2e-45 185.7 104 86.5
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 4.2e-45 185.3 134 71.6
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 9.3e-45 184.1 144 70.1
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 9.3e-45 184.1 98 90.8
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 2.7e-44 182.6 181 62.4
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 1.3e-43 180.3 97 89.7
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.3e-43 180.3 187 56.7
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 1.3e-43 180.3 97 88.7
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 2.3e-43 179.5 182 58.2
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 3.0e-43 179.1 160 64.4
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 5.1e-43 178.3 112 80.4
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 1.1e-42 177.2 111 78.4
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 3.3e-42 175.6 146 63.7
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 4.3e-42 175.3 98 84.7
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 4.3e-42 175.3 142 63.4
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 9.6e-42 174.1 146 63.0
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.3e-41 173.7 117 76.1
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 2.8e-41 172.6 100 83.0
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 3.7e-41 172.2 142 65.5
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 2.4e-40 169.5 133 66.9
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 2.4e-40 169.5 132 67.4
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 2.4e-40 169.5 162 62.3
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 5.3e-40 168.3 180 55.6
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 9.0e-40 167.5 140 63.6
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.2e-39 167.2 133 67.7
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 1.2e-39 167.2 144 63.2
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 5.8e-39 164.9 147 66.0
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.0e-38 164.1 133 66.2
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 4.9e-38 161.8 145 64.1
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 4.9e-38 161.8 135 63.0
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 4.9e-38 161.8 126 68.3
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 6.5e-38 161.4 118 70.3
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 1.4e-37 160.2 122 66.4
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.9e-37 159.8 128 66.4
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 3.2e-37 159.1 179 53.1
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 3.2e-37 159.1 179 53.1
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 3.2e-37 159.1 179 53.1
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 4.2e-37 158.7 179 52.5
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.2e-36 157.1 179 52.0
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 6.0e-36 154.8 179 50.8
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 6.0e-36 154.8 180 50.6
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 6.0e-36 154.8 178 51.7
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 7.9e-36 154.5 179 52.0
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 1.0e-35 154.1 178 51.1
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 1.3e-35 153.7 98 75.5
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 2.3e-35 152.9 138 65.9
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 3.9e-35 152.1 178 51.7
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 6.7e-35 151.4 97 74.2
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 8.7e-35 151.0 105 67.6
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.5e-34 150.2 98 71.4
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.9e-34 149.8 120 66.7
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.9e-34 149.8 180 53.3
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.9e-34 149.8 180 53.3
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 2.5e-34 149.4 98 73.5
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 3.3e-34 149.1 122 64.8
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 3.3e-34 149.1 139 59.0
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 1.6e-33 146.7 98 72.4
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 3.7e-33 145.6 123 63.4
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 4.1e-32 142.1 129 62.0
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 4.1e-32 142.1 87 81.6
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 6.9e-32 141.4 89 75.3
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 1.0e-30 137.5 113 66.4
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 1.3e-30 137.1 125 60.0
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 2.2e-30 136.3 118 64.4
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 6.5e-30 134.8 135 57.0
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.1e-29 134.0 130 61.5
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 1.9e-29 133.3 136 56.6
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 4.2e-29 132.1 157 51.0
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 7.2e-29 131.3 154 48.7
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 1.2e-28 130.6 151 57.6
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 1.0e-27 127.5 83 78.3
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 1.5e-26 123.6 156 48.7
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 5.7e-26 121.7 123 55.3
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 5.9e-23 111.7 134 51.5
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 7.7e-23 111.3 66 75.8
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 2.5e-21 106.3 104 61.5
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 5.5e-21 105.1 70 75.7
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 6.1e-20 101.7 118 55.1
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 7.9e-20 101.3 159 45.9
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 1.4e-19 100.5 119 51.3
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 4.4e-18 95.5 117 43.6
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 1.7e-17 93.6 64 70.3
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.8e-17 92.8 115 49.6
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.1e-16 89.4 92 55.4
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 3.4e-15 85.9 65 64.6
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 3.4e-15 85.9 84 51.2
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 2.9e-14 82.8 158 36.1
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 3.8e-14 82.4 92 55.4
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 2.1e-12 76.6 102 47.1
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 3.9e-11 72.4 115 36.5
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 4.1e-08 62.4 80 42.5


User provided reference genes

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