Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0213900 Salix brachista HOM05D005678 ORTHO05D006894 2.6e-83 312.4 204 100.0
Potri.018G004901 Populus trichocarpa HOM05D005678 ORTHO05D006894 1.2e-59 233.8 210 80.0
Sabra18G0010600 Salix brachista HOM05D005678 ORTHO05D006894 4.5e-43 178.7 211 62.6
Potri.006G276300 Populus trichocarpa HOM05D005678 ORTHO05D006894 3.7e-37 159.1 145 90.3
Sabra18G0000200 Salix brachista HOM05D005678 ORTHO05D006894 6.3e-37 158.3 256 52.0
Thecc.09G005500 Theobroma cacao HOM05D005678 ORTHO05D006894 1.4e-33 147.1 103 68.0
Duzib187G0563 Durio zibethinus HOM05D005678 ORTHO05D006894 1.4e-31 140.6 105 63.8
Gohir.A05G065600 Gossypium hirsutum HOM05D005678 ORTHO05D006894 1.4e-31 140.6 110 60.9
Manes.03G002700 Manihot esculenta HOM05D005678 ORTHO05D006894 5.1e-31 138.7 100 67.0
GSVIVG01035539001 Vitis vinifera HOM05D005678 ORTHO05D006894 2.0e-30 136.7 199 45.7
Actinidia03578 Actinidia chinensis HOM05D005678 ORTHO05D006894 3.3e-30 136.0 86 72.1
Dinv16205 Davidia involucrata HOM05D005678 ORTHO05D006894 5.7e-30 135.2 202 43.1
Gohir.D05G068200 Gossypium hirsutum HOM05D005678 ORTHO05D006894 7.4e-30 134.8 110 59.1
Gorai.009G069000 Gossypium raimondii HOM05D005678 ORTHO05D006894 7.4e-30 134.8 110 59.1
vmacro00604 Vaccinium macrocarpon HOM05D005678 ORTHO05D006894 7.4e-30 134.8 87 67.8
Migut.A00794 Erythranthe guttata HOM05D005678 ORTHO05D006894 9.7e-30 134.4 89 68.5
Eucgr.C02102 Eucalyptus grandis HOM05D005678 ORTHO05D006894 9.7e-30 134.4 104 63.5
AL7G20710 Arabidopsis lyrata HOM05D005678 ORTHO05D006894 1.7e-29 133.7 90 67.8
Aa31LG2G19000 Aethionema arabicum HOM05D005678 ORTHO05D006894 4.8e-29 132.1 85 70.6
Sc09g0007960 Simmondsia chinensis HOM05D005678 ORTHO05D006894 6.3e-29 131.7 85 69.4
Prupe.1G462000 Prunus persica HOM05D005678 ORTHO05D006894 8.2e-29 131.3 86 68.6
CiPaw.07G214300 Carya illinoinensis HOM05D005678 ORTHO05D006894 1.1e-28 131.0 86 67.4
QL12p024739 Quercus lobata HOM05D005678 ORTHO05D006894 1.1e-28 131.0 101 62.4
Carub.0007s0920 Capsella rubella HOM05D005678 ORTHO05D006894 1.4e-28 130.6 90 66.7
Cc08_g14330 Coffea canephora HOM05D005678 ORTHO05D006894 1.4e-28 130.6 106 58.5
CANSAT25G2809 Cannabis sativa HOM05D005678 ORTHO05D006894 1.8e-28 130.2 86 68.6
AT4G31360 Arabidopsis thaliana HOM05D005678 ORTHO05D006894 2.4e-28 129.8 90 66.7
Duzib168G0107 Durio zibethinus HOM05D005678 ORTHO05D006894 2.4e-28 129.8 109 58.7
ECA246G1984 Erigeron canadensis HOM05D005678 ORTHO05D006894 2.4e-28 129.8 102 60.8
SalBow6G4551 Salvia bowleyana HOM05D005678 ORTHO05D006894 3.1e-28 129.4 86 66.3
VMungo0647G1216 Vigna mungo HOM05D005678 ORTHO05D006894 3.1e-28 129.4 106 59.4
BcaC09g51917 Brassica carinata HOM05D005678 ORTHO05D006894 6.9e-28 128.3 202 43.1
C01p07670 Brassica napus HOM05D005678 ORTHO05D006894 6.9e-28 128.3 202 43.1
BolC1t00747H Brassica oleracea HOM05D005678 ORTHO05D006894 6.9e-28 128.3 202 43.1
Hma1.2p1_0102F.1_g049830 Hydrangea macrophylla HOM05D005678 ORTHO05D006894 6.9e-28 128.3 86 66.3
THA.LOC104803592 Tarenaya hassleriana HOM05D005678 ORTHO05D006894 6.9e-28 128.3 200 44.0
Cpa.g.sc244.11 Carica papaya HOM05D005678 ORTHO05D006894 1.2e-27 127.5 199 43.2
THA.LOC104801628 Tarenaya hassleriana HOM05D005678 ORTHO05D006894 1.2e-27 127.5 210 41.4
Sc09g0007970 Simmondsia chinensis HOM05D005678 ORTHO05D006894 1.5e-27 127.1 102 59.8
BcaB06g27969 Brassica carinata HOM05D005678 ORTHO05D006894 2.6e-27 126.3 87 65.5
CARHR117620 Cardamine hirsuta HOM05D005678 ORTHO05D006894 2.6e-27 126.3 86 65.1
CiPaw.08G018100 Carya illinoinensis HOM05D005678 ORTHO05D006894 2.6e-27 126.3 204 43.1
Ciclev10009502m.g Citrus clementina HOM05D005678 ORTHO05D006894 2.6e-27 126.3 207 56.5
HanXRQChr06g0173291 Helianthus annuus HOM05D005678 ORTHO05D006894 5.9e-27 125.2 87 64.4
Lj5g0006596 Lotus japonicus HOM05D005678 ORTHO05D006894 5.9e-27 125.2 204 42.6
Sp7g29220 Schrenkiella parvula HOM05D005678 ORTHO05D006894 5.9e-27 125.2 208 43.3
Glyma.14G133100 Glycine max HOM05D005678 ORTHO05D006894 7.7e-27 124.8 104 59.6
arahy.Tifrunner.gnm1.ann1.V3TD4F Arachis hypogaea HOM05D005678 ORTHO05D006894 1.0e-26 124.4 88 64.8
arahy.Tifrunner.gnm1.ann1.XT6XQE Arachis hypogaea HOM05D005678 ORTHO05D006894 1.0e-26 124.4 88 64.8
BraA01t00642Z Brassica rapa HOM05D005678 ORTHO05D006894 1.0e-26 124.4 205 47.8
Carub.0004s0379 Capsella rubella HOM05D005678 ORTHO05D006894 1.0e-26 124.4 84 66.7
Glyma.17G201900 Glycine max HOM05D005678 ORTHO05D006894 1.0e-26 124.4 107 58.9
TWI34G1196 Tripterygium wilfordii HOM05D005678 ORTHO05D006894 1.3e-26 124.0 202 48.5
SGA_v2.0_scaffold146G36252 Striga asiatica HOM05D005678 ORTHO05D006894 1.7e-26 123.6 87 63.2
Lalb_Chr24g0402441 Lupinus albus HOM05D005678 ORTHO05D006894 2.2e-26 123.2 89 61.8
BcaC02g08455 Brassica carinata HOM05D005678 ORTHO05D006894 2.9e-26 122.9 87 62.1
C04p54050 Brassica napus HOM05D005678 ORTHO05D006894 2.9e-26 122.9 87 62.1
A04p18760 Brassica napus HOM05D005678 ORTHO05D006894 3.8e-26 122.5 88 61.4
A08p18690 Brassica napus HOM05D002168 ORTHO05D002277 3.8e-26 122.5 87 64.4
A09p56300 Brassica napus HOM05D005678 ORTHO05D006894 3.8e-26 122.5 86 65.1
BraA09t41025Z Brassica rapa HOM05D005678 ORTHO05D006894 3.8e-26 122.5 86 65.1
A01p06940 Brassica napus HOM05D005678 ORTHO05D006894 5.0e-26 122.1 205 46.8
BolC3t21115H Brassica oleracea HOM05D005678 ORTHO05D006894 5.0e-26 122.1 99 60.6
Oeu009186.1 Olea europaea HOM05D005678 ORTHO05D006894 5.0e-26 122.1 85 64.7
AT2G24440 Arabidopsis thaliana HOM05D005678 ORTHO05D006894 6.5e-26 121.7 84 64.3
BolC8t51499H Brassica oleracea HOM05D005678 ORTHO05D006894 6.5e-26 121.7 86 65.1
PSO170G6167 Papaver somniferum HOM05D005678 ORTHO05D006894 6.5e-26 121.7 101 56.4
AL4G14870 Arabidopsis lyrata HOM05D005678 ORTHO05D006894 8.5e-26 121.3 84 63.1
MD00G1173100 Malus domestica HOM05D005678 ORTHO05D006894 8.5e-26 121.3 86 61.6
MD08G1134200 Malus domestica HOM05D005678 ORTHO05D006894 8.5e-26 121.3 86 61.6
Nitab4.5_0008905g0030 Nicotiana tabacum HOM05D005678 ORTHO05D006894 8.5e-26 121.3 105 55.2
C08p39250 Brassica napus HOM05D005678 ORTHO05D006894 1.1e-25 120.9 86 64.0
BraA04t17485Z Brassica rapa HOM05D005678 ORTHO05D006894 1.1e-25 120.9 87 60.9
ClCG08G012760 Citrullus lanatus HOM05D005678 ORTHO05D006894 1.9e-25 120.2 204 36.3
HanXRQChr17g0536371 Helianthus annuus HOM05D005678 ORTHO05D006894 1.9e-25 120.2 200 38.5
PSO063G6472 Papaver somniferum HOM05D005678 ORTHO05D006894 1.9e-25 120.2 104 54.8
Thhalv10000334m.g Eutrema salsugineum HOM05D005678 ORTHO05D006894 2.5e-25 119.8 84 64.3
Nitab4.5_0001356g0020 Nicotiana tabacum HOM05D005678 ORTHO05D006894 2.5e-25 119.8 92 60.9
MELO3C011199.2 Cucumis melo HOM05D005678 ORTHO05D006894 4.2e-25 119.0 209 38.3
Sp4g03460 Schrenkiella parvula HOM05D005678 ORTHO05D006894 7.2e-25 118.2 80 65.0
COL.COLO4_19050 Corchorus olitorius HOM05D005678 ORTHO05D006894 9.4e-25 117.9 105 52.4
CsaV3_2G031490 Cucumis sativus L. HOM05D005678 ORTHO05D006894 9.4e-25 117.9 209 37.8
Lsat_1_v5_gn_3_22720 Lactuca sativa HOM05D005678 ORTHO05D006894 1.2e-24 117.5 194 45.9
Phvul.001G058200 Phaseolus vulgaris HOM05D005678 ORTHO05D006894 1.2e-24 117.5 89 59.6
TAR383G0152 Trochodendron aralioides HOM05D005678 ORTHO05D006894 2.7e-24 116.3 197 42.6
MD15G1109600 Malus domestica HOM05D005678 ORTHO05D006894 6.1e-24 115.2 102 56.9
Aa31LG7G11430 Aethionema arabicum HOM05D005678 ORTHO05D006894 7.9e-24 114.8 99 57.6
MSTRG.1882 Avicennia marina HOM05D005678 ORTHO05D006894 1.0e-23 114.4 206 37.4
BolC4t26956H Brassica oleracea HOM05D005678 ORTHO05D006894 1.4e-23 114.0 207 49.8
PGR142G1712 Punica granatum HOM05D005678 ORTHO05D006894 1.4e-23 114.0 210 38.1
TPR.G12081 Trifolium pratense HOM05D005678 ORTHO05D006894 1.8e-23 113.6 204 43.6
Os11g0704000 Oryza sativa ssp. japonica HOM05D005678 ORTHO05D006894 2.3e-23 113.2 97 55.7
Sopen08g029020 Solanum pennellii HOM05D005678 ORTHO05D006894 3.0e-23 112.8 91 57.1
Sed0002806 Sechium edule HOM05D005678 ORTHO05D006894 3.9e-23 112.5 200 41.5
CAN.G859.10 Capsicum annuum HOM05D005678 ORTHO05D006894 8.8e-23 111.3 89 57.3
MBI16_g25208_MAGBIO Magnolia biondii HOM05D005678 ORTHO05D006894 1.5e-22 110.5 198 37.9
PGSC0003DMG400003060 Solanum tuberosum HOM05D005678 ORTHO05D006894 1.5e-22 110.5 91 56.0
Ca_12878_v3 Cicer arietinum L. HOM05D005678 ORTHO05D006894 2.0e-22 110.2 90 56.7
Zm00001eb409020 Zea mays HOM05D005678 ORTHO05D006894 3.3e-22 109.4 103 50.5
Os05g0250500 Oryza sativa ssp. japonica HOM05D005678 ORTHO05D006894 4.4e-22 109.0 97 56.7
TWI63G1651 Tripterygium wilfordii HOM05D005678 ORTHO05D006894 4.4e-22 109.0 85 60.0
Pp3c6_27420 Physcomitrium patens HOM05D005678 ORTHO05D006894 5.7e-22 108.6 88 52.3
RcHm_v2.0_Chr6g0312181 Rosa chinensis HOM05D005678 ORTHO05D006894 9.7e-22 107.8 211 37.4
Aqoxy7G03048 Aquilegia oxysepala HOM05D005678 ORTHO05D006894 1.7e-21 107.1 99 51.5
Atru.chr7.2621 Acer truncatum HOM05D005678 ORTHO05D006894 2.2e-21 106.7 208 35.6
FAN15G3337 Fragaria x ananassa HOM05D005678 ORTHO05D006894 3.7e-21 105.9 208 37.0
Psat6g032200 Pisum sativum HOM05D005678 ORTHO05D006894 6.3e-21 105.1 202 40.1
BcaC07g40931 Brassica carinata HOM05D005678 ORTHO05D006894 1.4e-20 104.0 78 60.3
SHI21122 Sapria himalayana HOM05D005678 ORTHO05D006894 1.8e-20 103.6 77 58.4
FvH4_2g30710 Fragaria vesca HOM05D005678 ORTHO05D006894 2.4e-20 103.2 198 45.5
FAN20G0695 Fragaria x ananassa HOM05D005678 ORTHO05D006894 2.4e-20 103.2 197 43.7
FAN24G1799 Fragaria x ananassa HOM05D000178 ORTHO05D001582 2.4e-20 103.2 198 45.5
Pp3c5_240 Physcomitrium patens HOM05D005678 ORTHO05D006894 4.1e-20 102.4 109 44.0
SGA_v2.0_scaffold144G35960 Striga asiatica HOM05D000250 ORTHO05D002850 7.0e-20 101.7 86 51.2
CARHR239240 Cardamine hirsuta HOM05D005678 ORTHO05D006894 9.1e-20 101.3 70 70.0
FAN27G1837 Fragaria x ananassa HOM05D005678 ORTHO05D006894 1.6e-19 100.5 197 42.1
SEGI_38696 Sequoiadendron giganteum HOM05D005678 ORTHO05D006894 2.2e-18 96.7 96 49.0
BcaC01g01095 Brassica carinata HOM05D005678 ORTHO05D006894 9.4e-17 91.3 67 67.2
HPP92_015389 Vanilla planifolia HOM05D005678 ORTHO05D006894 1.6e-16 90.5 82 48.8
HPP92_027003 Vanilla planifolia HOM05D005678 ORTHO05D006894 1.6e-16 90.5 82 48.8
Hund19398 Selenicereus undatus HOM05D005678 ORTHO05D006894 8.0e-16 88.2 120 41.7
Peaxi162Scf00102g01516 Petunia axillaris HOM05D005678 ORTHO05D006894 4.0e-15 85.9 53 69.8
Mapoly0188s0010 Marchantia polymorpha HOM05D005678 ORTHO05D006894 5.2e-15 85.5 88 40.9
Migut.E01114 Erythranthe guttata HOM05D005678 ORTHO05D006894 6.7e-15 85.1 90 46.7
Migut.E01115 Erythranthe guttata HOM05D005678 ORTHO05D006894 4.4e-14 82.4 196 42.9
Haze_21702 Corylus avellana HOM05D005678 ORTHO05D006894 9.7e-14 81.3 54 63.0
Haze_21709 Corylus avellana HOM05D005678 ORTHO05D006894 8.2e-13 78.2 46 71.7
Rhsim09G0030000 Rhododendron simsii HOM05D005678 ORTHO05D006894 1.1e-12 77.8 105 41.0
HanXRQChr04g0118101 Helianthus annuus HOM05D005678 ORTHO05D006894 1.2e-11 74.3 56 60.7
Potri.018G004701 Populus trichocarpa HOM05D005678 ORTHO05D006894 8.5e-10 68.2 51 78.4
Cre02.g120301 Chlamydomonas reinhardtii HOM05D005678 ORTHO05D006894 1.5e-09 67.4 80 41.2
C03p88040 Brassica napus HOM05D005678 ORTHO05D006894 4.7e-08 62.4 51 56.9


User provided reference genes

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