Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0212100 Salix brachista HOM05D007251 ORTHO05D009266 2.1e-163 578.9 288 100.0
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 2.1e-118 429.5 213 98.6
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 3.7e-91 339.0 212 81.1
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 4.1e-74 282.3 213 65.3
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 1.2e-73 280.8 213 62.4
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 5.0e-72 275.4 212 63.7
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 6.5e-72 275.0 212 62.3
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 7.2e-71 271.6 212 62.3
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 1.6e-70 270.4 212 60.4
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 2.7e-70 269.6 212 60.4
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 2.7e-70 269.6 213 61.5
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 7.9e-70 268.1 212 60.4
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 1.4e-69 267.3 212 60.8
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 2.3e-69 266.5 208 63.9
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 5.1e-69 265.4 212 61.8
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 1.5e-68 263.8 213 59.6
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 2.0e-68 263.5 214 59.8
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 3.3e-68 262.7 212 58.5
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 9.7e-68 261.2 212 60.4
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 1.3e-67 260.8 212 57.1
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 2.2e-67 260.0 212 57.5
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 6.3e-67 258.5 212 59.9
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 8.2e-67 258.1 212 58.0
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 1.4e-66 257.3 212 58.5
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 2.4e-66 256.5 212 59.9
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 3.1e-66 256.1 212 58.5
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 3.1e-66 256.1 212 58.5
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 3.1e-66 256.1 212 58.5
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 3.1e-66 256.1 212 58.0
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 4.1e-66 255.8 212 56.1
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 5.3e-66 255.4 212 56.1
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 5.3e-66 255.4 212 59.0
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 5.3e-66 255.4 212 56.6
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 6.9e-66 255.0 212 57.5
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 9.1e-66 254.6 212 58.0
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 1.5e-65 253.8 212 58.0
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 1.5e-65 253.8 217 59.0
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 4.5e-65 252.3 212 59.0
Carub.0006s0915 Capsella rubella HOM05D007251 ORTHO05D009266 4.5e-65 252.3 212 58.0
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 5.9e-65 251.9 214 55.6
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 7.7e-65 251.5 212 59.0
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 1.3e-64 250.8 212 57.1
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 1.7e-64 250.4 212 56.1
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 2.2e-64 250.0 212 58.0
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 2.9e-64 249.6 221 56.1
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 6.5e-64 248.4 212 57.5
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 8.5e-64 248.1 217 55.8
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 1.1e-63 247.7 212 58.5
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 3.2e-63 246.1 212 57.5
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 5.5e-63 245.4 212 55.2
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 1.6e-62 243.8 212 57.1
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 1.0e-61 241.1 217 54.4
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 3.9e-61 239.2 220 57.3
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 3.9e-61 239.2 212 55.2
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 5.2e-61 238.8 212 55.2
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 6.7e-61 238.4 212 55.2
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 1.1e-60 237.7 235 52.8
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 1.5e-60 237.3 213 55.4
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 2.6e-60 236.5 209 54.5
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 3.3e-60 236.1 212 54.2
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 4.4e-60 235.7 235 50.2
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 4.4e-60 235.7 209 54.5
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 9.7e-60 234.6 212 55.2
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 1.7e-59 233.8 212 54.7
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 3.7e-59 232.6 212 55.2
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 6.3e-59 231.9 212 55.2
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 1.1e-58 231.1 212 54.2
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 4.1e-58 229.2 212 52.8
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 2.2e-56 223.4 222 51.4
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 3.2e-55 219.5 209 52.2
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 1.4e-53 214.2 212 49.1
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 2.8e-51 206.5 209 51.7
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 9.1e-50 201.4 212 48.6
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 1.6e-49 200.7 212 49.5
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 1.6e-49 200.7 212 50.0
Manes.16G135400 Manihot esculenta HOM05D007251 ORTHO05D009266 2.7e-49 199.9 132 73.5
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 1.6e-46 190.7 212 46.7
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 2.7e-46 189.9 244 39.3
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 4.4e-44 182.6 264 41.7
AL6G21210 Arabidopsis lyrata HOM05D007251 ORTHO05D009266 1.1e-39 167.9 116 67.2
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 3.6e-38 162.9 202 46.5
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 4.0e-37 159.5 212 42.0
Potri.006G274133 Populus trichocarpa HOM05D007251 ORTHO05D009266 2.0e-33 147.1 110 70.9
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 2.5e-31 140.2 201 35.8
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 2.0e-28 130.6 209 36.4
Cfa023054 Carpinus fangiana HOM05D007251 ORTHO05D009266 3.2e-26 123.2 114 57.0
Cfa013277 Carpinus fangiana HOM05D007251 ORTHO05D009266 7.0e-26 122.1 78 69.2
CsaV3_3G047120 Cucumis sativus L. HOM05D007251 ORTHO05D009266 9.5e-23 111.7 77 68.8
Sed0014514 Sechium edule HOM05D007251 ORTHO05D009266 1.6e-22 110.9 78 67.9
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 1.0e-21 108.2 223 30.9
Oeu019281.1 Olea europaea HOM05D007251 ORTHO05D009266 9.8e-20 101.7 110 49.1
SMO137G0044 Selaginella moellendorffii HOM05D007251 ORTHO05D009266 3.7e-19 99.8 214 30.4
Actinidia22254 Actinidia chinensis HOM05D007251 ORTHO05D009266 2.4e-18 97.1 121 47.1
Sabra08G0059000 Salix brachista HOM05D001637 ORTHO05D002178 1.3e-11 74.7 66 62.1
Pp3c8_4280 Physcomitrium patens HOM05D007251 ORTHO05D009266 2.5e-07 60.5 89 36.0


User provided reference genes

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