Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 6.0e-97 357.5 173 100.0
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 3.2e-90 335.1 173 92.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 4.1e-90 334.7 173 93.6
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.9e-87 325.9 172 90.1
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 6.8e-85 317.4 173 88.4
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 8.9e-85 317.0 171 87.7
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 2.0e-84 315.8 173 87.3
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.9e-83 312.0 173 86.1
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.9e-83 312.0 173 86.1
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 6.4e-83 310.8 173 86.7
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 6.4e-83 310.8 171 84.2
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 6.4e-83 310.8 173 85.5
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.1e-82 310.1 173 85.5
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.1e-82 310.1 173 85.5
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 1.1e-82 310.1 173 85.5
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.9e-82 309.3 173 85.5
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.9e-82 309.3 173 85.5
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.2e-82 308.5 173 85.0
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 3.2e-82 308.5 173 85.0
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 3.2e-82 308.5 173 83.8
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 4.2e-82 308.1 173 85.5
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.2e-82 308.1 173 85.0
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 5.4e-82 307.8 173 85.0
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 5.4e-82 307.8 173 86.7
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 7.1e-82 307.4 173 84.4
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 7.1e-82 307.4 173 83.8
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 7.1e-82 307.4 172 84.9
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.2e-81 306.6 173 85.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.2e-81 306.6 173 84.4
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.2e-81 306.6 171 83.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.6e-81 306.2 173 84.4
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 2.1e-81 305.8 173 83.2
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 2.1e-81 305.8 171 82.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.1e-81 305.8 171 84.2
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 2.7e-81 305.4 170 85.3
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.7e-81 305.4 173 84.4
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 2.7e-81 305.4 173 85.0
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 3.5e-81 305.1 171 83.6
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.5e-81 305.1 175 84.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 3.5e-81 305.1 171 83.0
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 4.6e-81 304.7 171 83.6
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 4.6e-81 304.7 173 83.2
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 4.6e-81 304.7 173 85.0
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 6.0e-81 304.3 173 83.8
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 6.0e-81 304.3 173 83.8
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 6.0e-81 304.3 171 83.6
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 7.8e-81 303.9 173 83.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.0e-80 303.5 173 85.0
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.0e-80 303.5 171 83.6
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.3e-80 303.1 171 81.9
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.7e-80 302.8 173 82.7
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 2.3e-80 302.4 173 82.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 3.0e-80 302.0 173 82.7
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 5.1e-80 301.2 171 81.9
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 8.7e-80 300.4 171 81.9
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.5e-79 299.7 173 81.5
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.5e-79 298.9 177 83.6
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.5e-79 298.9 173 82.1
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 3.3e-79 298.5 171 84.2
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 3.3e-79 298.5 173 82.1
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 3.3e-79 298.5 173 79.2
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 4.3e-79 298.1 173 82.1
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 4.3e-79 298.1 171 82.5
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 5.6e-79 297.7 168 83.3
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 5.6e-79 297.7 168 83.3
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 7.3e-79 297.4 173 83.2
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 9.6e-79 297.0 173 81.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 9.6e-79 297.0 173 81.5
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 9.6e-79 297.0 173 82.1
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 9.6e-79 297.0 173 81.5
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.3e-78 296.6 173 81.5
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.3e-78 296.6 173 81.5
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.6e-78 296.2 173 80.9
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 2.1e-78 295.8 170 82.9
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 2.8e-78 295.4 171 80.7
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 2.8e-78 295.4 171 81.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 2.8e-78 295.4 171 80.7
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.8e-78 295.4 168 83.3
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.8e-78 295.4 168 83.3
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 3.6e-78 295.0 171 82.5
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 4.8e-78 294.7 173 80.9
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.2e-78 294.3 173 81.5
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 8.1e-78 293.9 173 80.3
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.1e-77 293.5 171 80.7
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.8e-77 292.7 171 81.9
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 4.0e-77 291.6 173 80.9
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 4.0e-77 291.6 173 79.8
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 4.0e-77 291.6 172 79.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 4.0e-77 291.6 173 80.3
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 4.0e-77 291.6 173 80.3
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 6.9e-77 290.8 161 82.6
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 6.9e-77 290.8 173 78.6
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 6.9e-77 290.8 173 78.6
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 6.9e-77 290.8 171 79.5
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 1.2e-76 290.0 173 80.3
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.5e-76 289.7 173 78.6
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.5e-76 289.7 173 78.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 1.5e-76 289.7 171 78.9
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.5e-76 289.7 170 80.6
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 2.0e-76 289.3 168 80.4
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.0e-76 289.3 173 79.8
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 2.6e-76 288.9 170 80.0
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 2.6e-76 288.9 170 78.8
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 2.6e-76 288.9 168 81.0
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.6e-76 288.9 173 79.8
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 3.4e-76 288.5 173 79.8
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 4.4e-76 288.1 173 80.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 4.4e-76 288.1 171 77.8
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 1.3e-75 286.6 171 78.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 4.9e-75 284.6 168 79.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.4e-74 281.2 173 75.7
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.5e-71 272.3 173 70.5
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 3.3e-71 271.9 173 74.6
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 3.3e-71 271.9 173 73.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 4.3e-71 271.6 166 75.3
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 9.6e-71 270.4 170 74.1
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 3.6e-70 268.5 172 72.1
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.1e-69 266.9 158 80.4
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.0e-68 262.7 166 71.7
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 9.9e-68 260.4 171 74.9
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.1e-63 246.9 132 85.6
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.1e-61 238.8 166 66.3
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.2e-49 200.3 170 56.5
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.3e-46 190.3 171 59.6
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.8e-45 186.4 181 55.2
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.1e-45 185.7 170 55.3
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.5e-43 177.9 101 85.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.1e-42 177.2 102 83.3
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.5e-42 176.0 116 76.7
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-41 173.7 116 75.9
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.8e-40 169.9 96 85.4
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.8e-37 159.8 170 48.2
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.5e-28 130.2 76 81.6
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 3.5e-28 129.0 73 76.7
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.2e-26 122.1 178 43.3
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.7e-22 109.0 96 62.5
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 2.1e-17 93.2 53 77.4
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.7e-11 73.6 58 62.1
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.4e-08 63.9 40 80.0


User provided reference genes

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