Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 1.1e-101 373.2 187 100.0
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 5.5e-80 301.2 187 81.3
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 2.9e-73 278.9 181 79.0
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 2.3e-62 242.7 177 67.2
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 9.7e-61 237.3 181 63.5
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 2.8e-60 235.7 181 63.5
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 2.8e-60 235.7 177 62.7
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.1e-59 231.9 184 61.4
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 9.1e-59 230.7 177 64.4
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 1.2e-58 230.3 184 61.4
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 1.2e-58 230.3 181 61.3
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 3.5e-58 228.8 170 65.3
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 3.2e-56 222.2 182 62.1
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 3.2e-56 222.2 181 63.5
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 4.2e-56 221.9 174 63.2
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 5.5e-56 221.5 174 60.9
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 7.2e-56 221.1 181 60.2
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 1.8e-54 216.5 185 56.2
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 2.6e-53 212.6 177 62.1
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 2.6e-53 212.6 177 58.2
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 3.4e-53 212.2 170 64.7
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.7e-52 209.9 219 50.7
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 2.8e-52 209.1 177 57.6
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 4.8e-52 208.4 172 64.5
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 4.8e-52 208.4 170 64.7
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 8.3e-52 207.6 177 55.9
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 1.8e-51 206.5 177 56.5
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 4.1e-51 205.3 177 54.8
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 5.4e-51 204.9 175 57.7
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 5.4e-51 204.9 177 58.2
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 7.0e-51 204.5 177 55.4
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 9.1e-51 204.1 177 56.5
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 1.6e-50 203.4 177 54.2
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 1.6e-50 203.4 177 54.2
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 1.6e-50 203.4 177 53.7
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 2.0e-50 203.0 177 61.0
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 2.0e-50 203.0 174 60.9
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 2.7e-50 202.6 171 57.3
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 1.1e-48 197.2 172 58.1
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 3.2e-48 195.7 175 54.9
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 4.2e-48 195.3 173 58.4
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 5.5e-48 194.9 177 52.5
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 2.7e-47 192.6 178 60.7
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 4.7e-47 191.8 185 52.4
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 1.0e-46 190.7 177 54.2
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 2.3e-46 189.5 171 59.1
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 4.0e-46 188.7 171 52.6
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 4.0e-46 188.7 176 56.2
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 8.8e-46 187.6 171 57.9
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 3.4e-45 185.7 175 53.7
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 5.7e-45 184.9 166 59.0
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 7.5e-45 184.5 179 50.3
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 1.3e-44 183.7 176 55.1
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 2.2e-44 183.0 179 50.8
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 2.8e-44 182.6 174 55.2
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 1.1e-43 180.6 176 52.8
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 1.4e-43 180.3 174 54.0
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 1.4e-43 180.3 174 54.0
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 1.8e-43 179.9 176 51.7
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 2.4e-43 179.5 173 52.6
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 2.4e-43 179.5 173 52.6
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 3.1e-43 179.1 176 52.8
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 4.1e-43 178.7 170 55.3
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 5.4e-43 178.3 176 50.6
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 1.6e-42 176.8 174 51.1
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 2.0e-42 176.4 181 50.8
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 2.0e-42 176.4 186 48.9
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 4.5e-42 175.3 174 50.6
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 7.7e-42 174.5 174 52.9
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 2.9e-41 172.6 178 51.7
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 3.8e-41 172.2 175 53.1
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 3.8e-41 172.2 175 53.1
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 6.6e-41 171.4 168 53.0
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 6.6e-41 171.4 176 52.3
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 6.6e-41 171.4 182 50.5
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 5.6e-40 168.3 173 50.9
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 9.5e-40 167.5 178 50.0
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 9.5e-40 167.5 195 47.2
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 2.8e-39 166.0 153 53.6
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 3.6e-39 165.6 172 50.6
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 6.1e-39 164.9 195 47.7
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 6.1e-39 164.9 186 48.4
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 8.0e-39 164.5 169 52.1
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 6.8e-38 161.4 190 48.4
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 1.7e-36 156.8 177 52.0
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 4.9e-36 155.2 172 47.7
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 9.2e-35 151.0 119 58.8
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 1.3e-33 147.1 177 47.5
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 1.3e-33 147.1 160 48.1
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 8.6e-33 144.4 167 50.9
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 1.1e-32 144.1 179 45.8
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 1.5e-32 143.7 115 60.9
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 3.3e-32 142.5 85 74.1
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 1.6e-31 140.2 175 44.6
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 4.7e-31 138.7 174 46.6
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 8.0e-31 137.9 171 43.9
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 1.4e-30 137.1 177 43.5
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 5.2e-30 135.2 164 45.7
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 6.4e-28 128.3 174 39.1
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 1.1e-27 127.5 169 42.6
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 3.2e-27 125.9 86 66.3
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 4.6e-26 122.1 147 46.3
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 1.3e-25 120.6 217 38.7
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 5.0e-25 118.6 110 50.9
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 8.6e-25 117.9 191 39.3
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 8.6e-25 117.9 191 39.3
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 5.6e-24 115.2 139 44.6
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 1.2e-23 114.0 160 43.1
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 2.3e-22 109.8 75 68.0
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.2e-21 107.5 152 44.1
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 7.5e-21 104.8 115 47.8
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 2.2e-20 103.2 173 36.4
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 7.8e-18 94.7 130 41.5
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 1.3e-17 94.0 125 42.4
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 3.0e-17 92.8 69 58.0
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 7.6e-13 78.2 84 50.0
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 7.6e-13 78.2 86 47.7
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 1.4e-11 73.9 70 51.4
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 1.5e-08 63.9 101 33.7
Zm00001eb345970 Zea mays HOM05D001617 ORTHO05D008611 2.4e-06 56.6 98 31.6


User provided reference genes

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