Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 6.2e-155 550.8 291 100.0
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 4.9e-144 514.6 291 88.7
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.1e-140 503.4 291 91.8
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 7.3e-140 500.7 291 91.1
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.1e-122 443.7 295 74.9
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.2e-121 440.3 293 74.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.5e-121 439.9 295 74.6
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.0e-120 437.2 295 74.6
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.0e-118 427.9 295 72.9
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.1e-117 424.9 293 72.4
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.1e-116 423.7 293 72.7
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.5e-116 422.5 295 70.8
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 5.7e-116 421.4 295 71.2
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 2.2e-115 419.5 294 72.1
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 4.8e-115 418.3 294 72.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 8.2e-115 417.5 295 70.2
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.1e-114 417.2 295 70.5
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.4e-114 416.8 294 72.1
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 9.0e-114 414.1 295 69.8
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.6e-113 412.5 293 70.3
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.6e-113 412.5 293 70.3
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 2.6e-113 412.5 295 68.8
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 2.9e-112 409.1 317 66.6
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.0e-112 408.3 279 72.0
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 2.5e-111 406.0 293 67.9
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 2.5e-111 406.0 293 68.6
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 5.5e-111 404.8 291 69.4
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.2e-110 403.7 290 68.6
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 2.7e-110 402.5 293 68.6
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 3.6e-110 402.1 291 67.7
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 7.9e-110 401.0 303 66.7
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.3e-109 399.4 293 66.2
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.5e-108 396.0 293 67.6
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 4.3e-108 395.2 293 66.2
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 4.3e-108 395.2 304 65.8
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 4.3e-108 395.2 292 67.1
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 5.7e-108 394.8 290 67.9
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 5.7e-108 394.8 275 70.5
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.7e-107 393.3 296 67.6
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.2e-107 392.9 294 68.7
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.8e-107 392.5 294 68.0
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 2.8e-107 392.5 281 69.4
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 3.7e-107 392.1 291 69.8
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.7e-107 392.1 304 65.5
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 4.8e-107 391.7 293 65.5
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 6.3e-107 391.3 297 66.0
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 6.3e-107 391.3 275 69.5
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.1e-106 390.6 294 68.0
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.4e-106 390.2 278 69.1
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.8e-106 389.8 300 65.0
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 3.1e-106 389.0 292 69.2
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 3.1e-106 389.0 308 64.0
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.1e-106 388.7 292 67.5
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 9.1e-106 387.5 297 65.3
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 9.1e-106 387.5 289 65.4
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.0e-105 386.3 297 66.7
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 2.0e-105 386.3 295 66.1
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 4.5e-105 385.2 295 66.4
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 5.9e-105 384.8 291 67.7
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.0e-104 384.0 305 63.6
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 3.8e-104 382.1 308 63.0
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 5.0e-104 381.7 298 66.4
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 8.5e-104 380.9 292 67.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 8.5e-104 380.9 299 70.9
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 8.5e-104 380.9 301 63.1
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.4e-103 380.2 296 65.2
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.4e-103 380.2 273 67.0
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 3.2e-103 379.0 291 67.7
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 3.2e-103 379.0 308 63.0
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 4.2e-103 378.6 296 66.2
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 4.2e-103 378.6 291 66.7
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 5.5e-103 378.3 280 69.3
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 7.2e-103 377.9 293 65.9
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 9.4e-103 377.5 277 70.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 9.4e-103 377.5 302 62.9
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.2e-102 377.1 291 64.6
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 2.7e-102 375.9 292 65.8
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 6.1e-102 374.8 371 54.7
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 5.1e-101 371.7 293 65.5
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 5.1e-101 371.7 277 69.7
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.7e-101 371.3 290 66.6
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 8.8e-101 370.9 294 64.6
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.1e-100 370.5 290 65.2
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.5e-100 370.2 294 66.0
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.0e-100 369.8 293 65.2
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 5.7e-100 368.2 293 65.9
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 5.7e-100 368.2 293 65.9
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 9.7e-100 367.5 311 60.5
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.2e-99 366.3 300 62.3
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.4e-98 363.6 285 70.5
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.5e-97 360.1 446 47.3
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 2.6e-97 359.4 302 59.9
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-96 356.7 290 62.4
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.1e-95 354.0 281 64.4
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.8e-93 346.7 270 64.8
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 1.5e-92 343.6 293 61.1
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 5.7e-92 341.7 274 63.1
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 4.5e-89 332.0 253 68.0
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 5.0e-88 328.6 243 65.8
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.9e-87 326.6 294 60.5
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 4.7e-86 322.0 282 61.3
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 9.7e-84 314.3 276 57.6
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 8.3e-83 311.2 276 57.2
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 2.4e-82 309.7 289 59.9
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 9.1e-82 307.8 275 60.7
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.5e-81 305.4 292 56.8
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.5e-79 300.4 292 56.5
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.5e-79 298.5 204 72.5
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.6e-78 297.0 259 61.0
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 3.7e-75 285.8 284 56.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.1e-74 284.3 195 70.8
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.8e-74 283.5 258 57.8
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 9.1e-74 281.2 208 66.8
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 2.9e-72 276.2 298 54.4
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 4.0e-69 265.8 272 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 9.5e-63 244.6 273 47.3
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 9.5e-63 244.6 275 47.6
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 1.2e-57 227.6 251 53.4
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.3e-56 223.4 267 42.7
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 3.9e-56 222.6 271 43.9
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 2.5e-55 219.9 166 63.9
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.5e-55 219.9 168 64.3
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-53 214.5 168 64.9
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.5e-52 210.7 269 43.1
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.5e-49 199.5 268 42.2
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 4.3e-47 192.6 169 62.7
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 1.4e-45 187.6 295 43.1
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 3.2e-42 176.4 213 49.8
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.8e-37 160.6 134 61.9
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.7e-35 154.1 133 56.4
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.8e-35 152.9 117 64.1
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 5.6e-23 112.5 125 49.6
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 8.4e-19 98.6 96 55.2
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 7.9e-17 92.0 238 36.1
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.1e-10 71.6 176 39.2
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 3.9e-08 63.2 52 53.8


User provided reference genes

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