Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.8e-171 605.9 315 100.0
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.4e-159 565.1 327 91.1
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.1e-128 462.2 323 78.0
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 5.9e-127 458.0 323 77.4
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.0e-126 457.2 324 75.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.2e-126 456.1 321 75.1
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.9e-125 453.0 322 75.8
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.2e-125 451.8 322 75.8
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 4.4e-122 441.8 325 73.8
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 9.8e-122 440.7 316 75.3
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 2.2e-121 439.5 315 74.3
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 3.7e-121 438.7 316 74.7
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 4.8e-121 438.3 322 73.0
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.4e-120 436.8 327 73.1
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.8e-120 436.4 321 72.6
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 9.1e-120 434.1 319 72.7
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.0e-118 430.6 321 71.3
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.3e-118 429.5 317 71.9
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 5.0e-118 428.3 321 71.3
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 6.5e-118 427.9 319 71.2
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.2e-117 425.2 324 69.8
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.1e-116 422.9 323 70.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.7e-116 421.8 319 70.5
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 6.1e-116 421.4 325 69.5
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 8.0e-116 421.0 321 72.9
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.0e-115 420.6 322 70.5
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.4e-115 420.2 321 71.3
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.3e-115 419.5 324 69.4
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.0e-115 419.1 322 70.2
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 4.0e-115 418.7 324 69.4
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 4.0e-115 418.7 315 73.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 4.0e-115 418.7 325 69.5
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.8e-115 417.9 322 69.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 4.4e-114 415.2 327 68.5
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 5.7e-114 414.8 295 74.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 7.5e-114 414.5 317 70.7
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 4.9e-113 411.8 325 68.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 6.3e-113 411.4 325 69.2
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.3e-113 411.4 310 72.3
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 8.3e-113 411.0 325 68.9
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 8.3e-113 411.0 322 69.9
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.1e-112 410.6 319 69.9
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.4e-112 410.2 322 68.0
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.8e-112 409.8 326 68.7
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 4.1e-112 408.7 322 69.3
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.4e-112 408.3 323 70.0
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 7.0e-112 407.9 337 66.2
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.2e-111 407.1 323 69.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.2e-111 407.1 293 73.4
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 3.5e-111 405.6 262 79.8
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.5e-111 405.6 293 72.7
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 5.9e-111 404.8 259 80.7
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.3e-110 403.7 323 70.0
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.9e-110 402.5 302 71.2
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 5.0e-110 401.7 348 64.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 5.0e-110 401.7 320 68.1
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 6.6e-110 401.4 315 67.9
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.1e-109 400.6 321 67.9
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.9e-109 399.8 324 68.2
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.5e-109 399.4 299 70.9
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.3e-109 398.7 319 66.8
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 7.3e-109 397.9 249 82.3
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.1e-108 396.4 250 82.8
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.8e-108 396.0 320 67.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 3.6e-108 395.6 320 67.2
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 4.7e-108 395.2 321 67.0
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 6.1e-108 394.8 316 68.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.8e-107 393.3 301 71.1
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 2.3e-107 392.9 320 68.4
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.3e-107 392.9 326 67.2
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 4.0e-107 392.1 252 78.6
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.5e-106 390.2 311 68.8
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 5.7e-106 388.3 364 60.7
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.3e-105 387.1 289 70.6
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.3e-105 387.1 236 83.9
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.7e-105 386.7 292 71.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 8.3e-105 384.4 315 66.3
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.1e-104 384.0 322 64.9
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.5e-103 379.0 334 63.5
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 3.9e-102 375.6 328 62.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 4.3e-101 372.1 238 79.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.6e-100 370.2 320 65.0
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.3e-99 366.3 250 74.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 2.3e-99 366.3 284 65.8
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.1e-99 365.9 346 60.4
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.0e-98 363.2 315 61.6
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.4e-96 357.1 325 60.9
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.0e-95 351.7 250 72.8
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.6e-93 345.1 321 60.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 8.1e-92 341.3 252 73.0
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.6e-87 327.0 221 76.0
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 2.1e-87 326.6 235 70.2
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 7.3e-85 318.2 232 71.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 4.7e-84 315.5 271 63.5
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.4e-83 313.9 319 56.4
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.6e-82 309.7 212 76.9
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.4e-80 303.1 189 83.1
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 7.1e-80 301.6 237 69.6
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.3e-78 297.4 216 66.7
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.2e-76 290.8 297 53.5
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.1e-75 287.7 257 63.8
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.9e-73 279.6 290 52.1
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.3e-69 266.2 327 48.0
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.5e-61 240.0 251 51.0
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 7.4e-61 238.4 276 47.1
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.3e-60 237.7 263 47.1
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.0e-59 231.5 253 48.2
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.0e-58 230.3 249 53.0
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.2e-56 223.0 129 87.6
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.8e-49 199.5 166 69.9
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.8e-46 190.7 257 41.2
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 7.4e-45 185.3 249 43.0
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.0e-38 164.9 246 37.0
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 8.8e-38 161.8 123 67.5
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 7.7e-26 122.1 294 35.0
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.0e-22 111.7 244 27.9
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 4.4e-21 106.3 235 31.5
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 3.8e-09 66.6 139 37.4
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.2e-07 61.6 76 51.3
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.4e-06 58.2 32 93.8
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 1.4e-06 58.2 52 55.8


User provided reference genes

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