Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0183100 Salix brachista HOM05D006132 ORTHO05D007305 1.7e-125 452.6 219 100.0
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 2.4e-34 149.8 111 70.3
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 1.8e-26 123.6 123 58.5
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 4.1e-26 122.5 117 55.6
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 4.5e-25 119.0 117 56.4
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 4.5e-25 119.0 117 57.3
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 4.5e-25 119.0 117 57.3
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 5.9e-25 118.6 117 57.3
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 7.7e-25 118.2 115 59.1
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 1.3e-24 117.5 117 54.7
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 6.5e-24 115.2 119 58.0
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 8.5e-24 114.8 121 53.7
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 2.5e-23 113.2 118 55.9
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 4.2e-23 112.5 121 54.5
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 1.2e-22 110.9 117 51.3
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 1.6e-22 110.5 117 51.3
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 2.1e-22 110.2 121 52.9
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 2.1e-22 110.2 82 64.6
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 2.1e-22 110.2 121 52.9
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 2.1e-22 110.2 82 64.6
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 2.1e-22 110.2 102 62.7
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 3.6e-22 109.4 105 57.1
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 6.1e-22 108.6 121 52.1
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 8.0e-22 108.2 82 63.4
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 8.0e-22 108.2 82 63.4
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 1.0e-21 107.8 121 53.7
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 1.4e-21 107.5 103 54.4
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 1.4e-21 107.5 118 56.8
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 1.8e-21 107.1 102 55.9
CSS0000087 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 2.3e-21 106.7 120 51.7
CSS0048337 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 2.3e-21 106.7 120 51.7
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 2.3e-21 106.7 121 52.1
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 5.2e-21 105.5 120 54.2
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 5.2e-21 105.5 120 54.2
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 5.2e-21 105.5 74 70.3
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 6.8e-21 105.1 106 55.7
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 6.8e-21 105.1 121 53.7
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 1.5e-20 104.0 110 51.8
SHI18803 Sapria himalayana HOM05D006132 ORTHO05D007305 2.6e-20 103.2 74 67.6
Psat4g077080 Pisum sativum HOM05D006132 ORTHO05D007305 3.4e-20 102.8 132 50.8
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 3.4e-20 102.8 122 54.1
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 3.4e-20 102.8 122 50.0
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 4.4e-20 102.4 90 53.3
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 4.4e-20 102.4 133 45.9
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 5.7e-20 102.1 90 53.3
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 5.7e-20 102.1 89 58.4
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 5.7e-20 102.1 122 53.3
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 7.5e-20 101.7 122 53.3
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 9.8e-20 101.3 126 49.2
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 9.8e-20 101.3 119 53.8
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 1.3e-19 100.9 116 48.3
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 1.3e-19 100.9 116 48.3
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 1.3e-19 100.9 119 49.6
Cpa.g.sc7.235 Carica papaya HOM05D006132 ORTHO05D007305 2.2e-19 100.1 98 54.1
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 2.2e-19 100.1 87 57.5
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 4.8e-19 99.0 122 48.4
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 6.3e-19 98.6 121 51.2
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 6.3e-19 98.6 122 48.4
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 1.8e-18 97.1 120 48.3
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 2.4e-18 96.7 80 62.5
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 4.1e-18 95.9 111 49.5
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 5.4e-18 95.5 83 57.8
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 5.4e-18 95.5 74 63.5
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 7.0e-18 95.1 117 47.0
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 9.1e-18 94.7 88 58.0
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 1.2e-17 94.4 107 48.6
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 2.7e-17 93.2 90 53.3
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 3.5e-17 92.8 113 52.2
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 3.5e-17 92.8 78 61.5
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 4.5e-17 92.4 78 61.5
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 4.5e-17 92.4 77 59.7
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 7.7e-17 91.7 69 66.7
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 1.0e-16 91.3 107 47.7
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 1.0e-16 91.3 114 43.9
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 1.3e-16 90.9 121 47.9
CSS0029204 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 2.9e-16 89.7 116 44.8
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 2.9e-16 89.7 87 51.7
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 3.8e-16 89.4 113 44.2
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 5.0e-16 89.0 113 44.2
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 6.5e-16 88.6 87 51.7
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 1.1e-15 87.8 64 65.6
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 1.1e-15 87.8 64 65.6
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 1.1e-15 87.8 64 65.6
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 2.5e-15 86.7 83 51.8
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 2.5e-15 86.7 90 51.1
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 7.2e-15 85.1 69 59.4
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 1.6e-14 84.0 119 45.4
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 1.6e-14 84.0 90 51.1
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 2.8e-14 83.2 118 48.3
CARHR240810 Cardamine hirsuta HOM05D006132 ORTHO05D007305 1.4e-13 80.9 90 52.2
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 1.4e-13 80.9 99 48.5
Peaxi162Scf00840g00429 Petunia axillaris HOM05D006132 ORTHO05D007305 1.8e-13 80.5 64 60.9
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 4.0e-13 79.3 97 44.3
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 4.4e-12 75.9 112 42.9
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 5.7e-12 75.5 111 40.5
SHI18807 Sapria himalayana HOM05D006132 ORTHO05D007305 1.3e-11 74.3 90 47.8
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 3.7e-11 72.8 61 59.0
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 3.1e-10 69.7 119 39.5
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 1.0e-08 64.7 102 40.2
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 1.3e-08 64.3 90 42.2
Psat4g077000 Pisum sativum HOM05D006132 ORTHO05D007305 3.3e-07 59.7 65 55.4
CBR_g22939 Chara braunii HOM05D006132 ORTHO05D000048 4.3e-07 59.3 69 44.9


User provided reference genes

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