Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 5.4e-117 424.5 233 100.0
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.3e-91 340.1 226 84.5
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 4.6e-36 155.6 228 50.0
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 9.4e-29 131.3 215 42.8
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 2.7e-28 129.8 215 45.1
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 1.8e-27 127.1 197 45.7
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.8e-27 127.1 214 42.5
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 5.1e-27 125.6 235 41.3
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 8.8e-27 124.8 238 43.7
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 7.4e-26 121.7 148 52.7
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 6.9e-24 115.2 216 42.6
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 4.5e-23 112.5 213 43.2
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 1.0e-22 111.3 207 44.0
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 1.4e-21 107.5 213 39.4
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 5.5e-21 105.5 224 40.6
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 5.5e-21 105.5 244 38.9
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 9.4e-21 104.8 225 36.4
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 6.1e-20 102.1 209 39.7
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.0e-19 101.3 214 39.3
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 3.0e-19 99.8 200 37.0
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 3.9e-19 99.4 237 38.0
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 5.2e-19 99.0 254 38.6
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 8.8e-19 98.2 255 38.8
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.3e-18 96.3 137 46.0
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 5.7e-18 95.5 121 49.6
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.2e-17 93.6 218 39.4
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 2.8e-17 93.2 113 54.9
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 2.8e-17 93.2 238 35.7
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 6.3e-17 92.0 210 37.1
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 6.3e-17 92.0 211 37.4
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 8.2e-17 91.7 212 38.2
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-16 91.3 219 36.1
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 1.4e-16 90.9 115 48.7
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 1.8e-16 90.5 223 38.1
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.8e-16 90.5 217 38.2
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 2.4e-16 90.1 211 37.0
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 4.1e-16 89.4 215 37.7
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.3e-16 89.0 219 37.4
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 7.0e-16 88.6 253 35.6
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 1.2e-15 87.8 229 39.3
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 2.6e-15 86.7 130 46.2
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 4.5e-15 85.9 190 37.4
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.7e-14 84.0 223 35.4
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.7e-14 84.0 74 58.1
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 2.9e-14 83.2 113 51.3
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 6.5e-14 82.0 141 41.8
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 6.5e-14 82.0 218 35.8
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 8.5e-14 81.6 217 38.7
arahy.Tifrunner.gnm1.ann1.EI9IQY Arachis hypogaea HOM05D007827 ORTHO05D009749 8.5e-14 81.6 193 39.4
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 3.2e-13 79.7 71 54.9
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 3.2e-13 79.7 234 33.3
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 3.2e-13 79.7 224 34.8
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 5.5e-13 79.0 116 43.1
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 7.2e-13 78.6 204 35.3
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 7.2e-13 78.6 132 38.6
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 9.4e-13 78.2 248 33.1
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.4e-11 74.3 220 33.2
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 1.4e-11 74.3 225 28.9
Sp2g21610 Schrenkiella parvula HOM05D002043 ORTHO05D009749 1.4e-11 74.3 142 41.5
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 3.0e-11 73.2 203 35.5
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 3.0e-11 73.2 227 32.2
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 6.7e-11 72.0 205 33.2
Carub.0006s2389 Capsella rubella HOM05D002043 ORTHO05D009749 6.7e-11 72.0 142 43.0
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 1.2e-10 71.2 201 34.3
Thhalv10005284m.g Eutrema salsugineum HOM05D002043 ORTHO05D009749 2.0e-10 70.5 156 36.5
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 5.7e-10 68.9 201 33.8
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 7.5e-10 68.6 208 32.7
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 9.7e-10 68.2 66 51.5
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.7e-09 67.4 227 31.7
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.7e-09 67.4 227 31.7
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 2.2e-09 67.0 106 41.5
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 6.3e-09 65.5 226 27.9
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 6.3e-09 65.5 101 41.6
AL6G38110 Arabidopsis lyrata HOM05D002043 ORTHO05D002207 8.2e-09 65.1 144 37.5
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 8.2e-09 65.1 226 27.9
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 1.1e-08 64.7 164 37.2
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.8e-08 63.9 226 28.3
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.8e-08 63.9 66 54.5
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 2.0e-07 60.5 90 41.1
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 2.0e-07 60.5 209 31.6
CARHR187400 Cardamine hirsuta HOM05D002043 ORTHO05D009749 3.5e-07 59.7 227 33.0
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 4.5e-07 59.3 164 31.7
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 7.7e-07 58.5 234 30.8
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 1.7e-06 57.4 212 32.1
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 2.2e-06 57.0 85 37.6
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 3.8e-06 56.2 169 30.2
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 8.5e-06 55.1 202 31.7


User provided reference genes

Program Settings