Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.9e-275 951.8 458 100.0
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.9e-113 413.7 302 71.5
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 8.6e-111 404.8 302 69.9
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 6.9e-92 342.0 297 60.3
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 5.4e-89 332.4 301 58.8
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 5.4e-89 332.4 301 58.8
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.1e-88 330.5 298 57.7
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.1e-88 330.5 302 57.9
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 6.7e-87 325.5 299 58.9
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.5e-86 324.3 310 57.4
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 4.3e-86 322.8 299 58.2
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 5.6e-86 322.4 302 57.9
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 7.4e-86 322.0 299 56.5
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 9.6e-86 321.6 299 58.5
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 9.6e-86 321.6 297 57.9
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.1e-85 320.5 301 57.5
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 1.1e-84 318.2 303 56.8
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 4.0e-84 316.2 301 56.5
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 5.3e-84 315.8 299 56.9
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 3.4e-83 313.2 328 52.1
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 7.6e-83 312.0 298 56.4
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 2.4e-81 307.0 302 54.3
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 5.5e-81 305.8 301 56.1
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 5.5e-81 305.8 301 56.1
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 1.2e-80 304.7 302 56.0
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 2.1e-80 303.9 300 54.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 2.7e-80 303.5 302 55.3
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 3.5e-80 303.1 302 57.3
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 6.0e-80 302.4 297 54.9
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 3.0e-79 300.1 303 55.4
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 3.9e-79 299.7 297 54.2
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 5.1e-79 299.3 298 53.7
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 4.3e-78 296.2 307 53.1
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 3.7e-77 293.1 299 52.2
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 3.7e-77 293.1 301 54.5
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 1.1e-76 291.6 298 53.7
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 3.4e-75 286.6 297 50.2
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 3.4e-75 286.6 298 52.0
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.3e-74 284.6 299 50.2
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 3.8e-74 283.1 300 52.0
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 3.8e-74 283.1 303 54.5
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 3.2e-73 280.0 304 51.0
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 4.2e-73 279.6 299 52.8
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 5.5e-73 279.3 297 49.2
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 7.9e-72 275.4 299 49.2
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.0e-71 275.0 297 49.5
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 1.1e-70 271.6 298 50.3
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 1.9e-70 270.8 298 50.7
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 3.3e-70 270.0 278 54.7
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 4.3e-70 269.6 299 48.5
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.2e-69 267.3 300 49.0
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 2.8e-69 266.9 299 51.8
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 8.2e-69 265.4 305 49.2
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 4.1e-68 263.1 303 47.5
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 4.1e-68 263.1 297 48.1
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.1e-68 263.1 297 48.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 9.0e-68 261.9 297 48.1
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 1.2e-67 261.5 292 50.0
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.3e-66 258.1 305 48.2
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.7e-66 257.7 309 47.2
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 2.9e-66 256.9 282 52.5
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 2.9e-66 256.9 310 47.1
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 8.5e-66 255.4 297 47.5
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.9e-65 254.2 299 47.5
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 5.5e-65 252.7 298 47.7
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 7.2e-65 252.3 308 45.5
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 9.4e-65 251.9 323 45.8
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.8e-63 247.7 299 45.2
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.9e-62 244.2 314 44.6
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.3e-62 243.0 299 45.2
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.7e-61 241.1 301 47.2
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 4.1e-60 236.5 286 47.6
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 5.0e-58 229.6 300 46.0
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 1.1e-57 228.4 263 49.0
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 2.5e-57 227.3 296 43.2
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 7.2e-57 225.7 313 42.8
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.4e-57 225.3 297 44.1
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 3.9e-55 219.9 299 42.1
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 2.8e-53 213.8 317 40.7
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 4.8e-53 213.0 256 48.4
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 1.4e-52 211.5 301 40.9
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 7.0e-52 209.1 282 44.3
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 1.3e-50 204.9 299 40.5
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 6.5e-50 202.6 273 45.1
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.0e-48 195.7 297 41.4
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 3.9e-47 193.4 264 42.4
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.6e-46 190.7 297 40.4
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 9.7e-46 188.7 284 40.5
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 2.2e-42 177.6 326 34.7
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 6.5e-42 176.0 137 59.9
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 6.1e-40 169.5 175 49.1
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 2.6e-38 164.1 230 42.2
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 3.3e-38 163.7 139 54.7
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 2.2e-37 161.0 218 43.1
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 2.4e-36 157.5 218 43.6
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 4.1e-36 156.8 218 43.6
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 5.3e-36 156.4 218 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 4.5e-35 153.3 259 36.3
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 7.7e-35 152.5 116 66.4
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 1.3e-34 151.8 143 52.4
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 8.5e-34 149.1 219 42.9
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 3.2e-33 147.1 306 31.7
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 1.2e-32 145.2 285 37.2
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 1.0e-31 142.1 187 46.0
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 1.0e-31 142.1 187 46.0
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.5e-30 138.3 187 44.4
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 7.5e-30 136.0 187 43.9
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 8.3e-29 132.5 67 86.6
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.1e-28 130.2 223 38.1
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 9.5e-25 119.0 186 41.9
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 8.0e-24 115.9 257 33.1
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 5.2e-23 113.2 89 61.8
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 7.5e-22 109.4 71 74.6
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.2e-21 107.8 232 34.1
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 1.6e-16 91.7 221 33.5
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 1.5e-14 85.1 93 47.3
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 3.4e-14 84.0 65 63.1
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 1.6e-08 65.1 64 50.0
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.4e-07 62.0 110 33.6
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.8e-07 61.6 64 53.1
Lsat_1_v5_gn_3_72021 Lactuca sativa HOM05D003211 ORTHO05D003621 2.3e-07 61.2 139 27.3


User provided reference genes

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