Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 5.1e-108 394.4 199 100.0
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.8e-97 359.4 199 91.5
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.8e-66 255.8 184 73.4
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 6.3e-66 254.6 193 70.5
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 8.5e-63 244.2 199 67.3
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.4e-62 243.4 199 66.8
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 2.5e-62 242.7 200 67.5
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.2e-62 242.3 199 69.8
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.2e-61 240.4 199 66.8
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 7.9e-61 237.7 197 67.5
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.0e-60 237.3 200 63.5
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.5e-59 233.4 202 62.9
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 2.0e-59 233.0 201 62.7
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 2.6e-59 232.6 140 80.7
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 2.6e-59 232.6 155 75.5
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 9.7e-59 230.7 158 72.8
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 4.8e-58 228.4 200 63.5
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 2.4e-57 226.1 202 64.4
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 3.1e-57 225.7 198 65.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 6.9e-57 224.6 177 68.4
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 6.9e-57 224.6 189 64.0
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.2e-56 223.8 176 67.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 1.5e-56 223.4 170 68.2
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.5e-56 223.4 204 63.7
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 2.0e-56 223.0 200 64.0
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 3.4e-56 222.2 169 68.0
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 4.5e-56 221.9 179 66.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.0e-55 220.7 181 64.6
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.0e-55 220.7 145 76.6
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 5.0e-55 218.4 200 61.5
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 5.0e-55 218.4 200 61.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.1e-54 217.2 147 72.8
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.9e-54 216.5 141 74.5
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 5.5e-54 214.9 203 61.1
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.2e-53 213.8 199 61.3
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.1e-53 213.0 165 65.5
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 3.6e-53 212.2 171 62.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 4.7e-53 211.8 182 64.8
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 6.1e-53 211.5 167 65.3
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.0e-52 210.7 203 58.1
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.4e-52 210.3 172 65.1
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.8e-52 209.9 198 59.1
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 3.9e-52 208.8 181 62.4
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.9e-52 208.8 181 62.4
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.5e-51 206.8 187 60.4
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.3e-51 205.7 183 59.0
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 4.4e-51 205.3 197 57.9
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 5.7e-51 204.9 204 58.3
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 5.7e-51 204.9 156 67.3
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 9.7e-51 204.1 182 61.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.3e-50 203.8 122 82.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.7e-50 203.4 197 56.9
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 2.2e-50 203.0 195 59.5
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 3.7e-50 202.2 158 67.7
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 4.8e-50 201.8 162 64.8
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 6.3e-50 201.4 160 65.6
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.1e-49 200.7 182 61.5
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.4e-49 200.3 113 85.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.0e-49 198.0 152 67.1
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 2.0e-48 196.4 142 68.3
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.0e-48 196.4 191 60.2
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.5e-48 195.7 113 85.0
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 3.5e-48 195.7 161 65.8
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.3e-47 193.7 171 64.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 2.9e-47 192.6 197 57.4
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.1e-46 190.7 140 71.4
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 7.2e-46 188.0 182 58.8
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.6e-45 186.8 140 68.6
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 2.1e-45 186.4 204 53.9
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 2.7e-45 186.0 175 57.7
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.6e-45 185.7 164 62.2
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 8.0e-45 184.5 142 69.0
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 8.0e-45 184.5 200 54.5
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.3e-44 183.0 123 74.0
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.3e-44 183.0 123 74.0
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 3.0e-44 182.6 181 56.9
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 3.0e-44 182.6 181 56.9
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 6.7e-44 181.4 191 55.5
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.5e-43 180.3 193 53.9
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 2.6e-43 179.5 123 72.4
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 4.4e-43 178.7 189 55.0
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 4.4e-43 178.7 189 55.0
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.7e-43 178.3 121 74.4
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 5.7e-43 178.3 176 55.1
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.8e-42 176.0 190 56.3
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 3.7e-42 175.6 192 54.2
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 8.2e-42 174.5 202 55.0
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.0e-39 167.5 213 50.2
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 2.9e-39 166.0 127 68.5
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 2.5e-38 162.9 200 52.5
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.2e-38 162.5 139 64.7
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.3e-34 150.6 147 56.5
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 9.1e-33 144.4 129 55.8
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 7.7e-32 141.4 145 50.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.2e-31 139.8 380 32.1
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 6.5e-31 138.3 127 55.9
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 3.2e-30 136.0 122 56.6
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 5.2e-28 128.6 82 75.6
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.3e-26 124.0 82 74.4
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.4e-25 119.8 84 70.2
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.0e-25 118.2 84 69.0
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 8.9e-20 101.3 80 62.5
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.2e-11 74.3 49 71.4
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 4.9e-10 68.9 107 45.8
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 8.3e-10 68.2 52 65.4
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 5.6e-06 55.5 85 47.1


User provided reference genes

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