Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0159100 Salix brachista HOM05D006431 ORTHO05D007918 0.0e+00 1154.8 565 100.0
Potri.006G206200 Populus trichocarpa HOM05D006431 ORTHO05D007918 1.2e-215 753.4 565 70.8
Manes.08G030500 Manihot esculenta HOM05D006431 ORTHO05D007918 1.9e-176 623.2 565 57.5
FAN02G3461 Fragaria x ananassa HOM05D006431 ORTHO05D007918 3.5e-170 602.4 566 55.7
FvH4_6g19780 Fragaria vesca HOM05D006431 ORTHO05D007918 2.3e-169 599.7 566 56.0
Haze_19670 Corylus avellana HOM05D006431 ORTHO05D007918 2.5e-168 596.3 568 54.2
RcHm_v2.0_Chr3g0475131 Rosa chinensis HOM05D006431 ORTHO05D007918 1.6e-167 593.6 566 54.8
GSVIVG01033921001 Vitis vinifera HOM05D006431 ORTHO05D007918 1.6e-167 593.6 565 55.0
FAN05G2067 Fragaria x ananassa HOM05D006431 ORTHO05D007918 6.1e-167 591.7 566 55.5
MD14G1033800 Malus domestica HOM05D006431 ORTHO05D007918 1.4e-166 590.5 566 55.1
Actinidia04011 Actinidia chinensis HOM05D006431 ORTHO05D007918 2.6e-165 586.3 565 54.0
FAN05G1952 Fragaria x ananassa HOM05D006431 ORTHO05D007918 2.6e-165 586.3 566 54.9
CSS0044043 Camellia sinensis var. sinensis HOM05D006431 ORTHO05D007918 7.5e-165 584.7 565 53.8
Actinidia03906 Actinidia chinensis HOM05D006431 ORTHO05D007918 9.8e-165 584.3 565 53.8
TWI74G1016 Tripterygium wilfordii HOM05D006431 ORTHO05D007918 2.9e-164 582.8 565 53.5
QL07p037629 Quercus lobata HOM05D006431 ORTHO05D007918 3.7e-164 582.4 564 53.9
Thecc.05G099600 Theobroma cacao HOM05D006431 ORTHO05D007918 3.2e-163 579.3 565 52.7
Atru.chr8.1414 Acer truncatum HOM05D006431 ORTHO05D007918 9.2e-163 577.8 563 53.3
Aqoxy2G01023 Aquilegia oxysepala HOM05D006431 ORTHO05D007918 2.3e-161 573.2 566 52.7
Gorai.006G151400 Gossypium raimondii HOM05D006431 ORTHO05D007918 1.1e-160 570.9 565 52.0
FAN14G3124 Fragaria x ananassa HOM05D006431 ORTHO05D007918 4.3e-160 568.9 764 45.3
ClCG10G018580 Citrullus lanatus HOM05D006431 ORTHO05D007918 7.3e-160 568.2 567 52.9
vmacro07456 Vaccinium macrocarpon HOM05D006431 ORTHO05D007918 4.7e-159 565.5 565 52.7
Ciclev10011702m.g Citrus clementina HOM05D006431 ORTHO05D007918 8.0e-159 564.7 548 54.0
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 1.0e-158 564.3 566 53.0
arahy.Tifrunner.gnm1.ann1.262DHG Arachis hypogaea HOM05D006431 ORTHO05D007918 1.8e-158 563.5 567 52.6
Gohir.A09G137300 Gossypium hirsutum HOM05D006431 ORTHO05D007918 6.8e-158 561.6 571 51.1
CiPaw.10G014500 Carya illinoinensis HOM05D006431 ORTHO05D007918 8.9e-158 561.2 565 52.0
Medtr7g105640 Medicago truncatula HOM05D006431 ORTHO05D007918 1.2e-157 560.8 565 52.0
PGR004G1888 Punica granatum HOM05D006431 ORTHO05D007918 1.2e-157 560.8 565 52.7
CANSAT64G0076 Cannabis sativa HOM05D006431 ORTHO05D007918 1.5e-157 560.5 569 51.5
Lj1g0021923 Lotus japonicus HOM05D006431 ORTHO05D007918 1.5e-157 560.5 565 52.0
Cfa016661 Carpinus fangiana HOM05D006431 ORTHO05D007918 2.0e-157 560.1 565 52.0
Rhsim03G0067800 Rhododendron simsii HOM05D006431 ORTHO05D007918 7.5e-157 558.1 570 52.6
TPR.G23342 Trifolium pratense HOM05D006431 ORTHO05D007918 7.5e-157 558.1 565 51.7
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 3.7e-156 555.8 566 52.1
THA.LOC104826813 Tarenaya hassleriana HOM05D006431 ORTHO05D007918 3.7e-156 555.8 564 52.0
CsaV3_3G037660 Cucumis sativus L. HOM05D006431 ORTHO05D007918 5.4e-155 552.0 567 51.3
arahy.Tifrunner.gnm1.ann1.P24J4F Arachis hypogaea HOM05D006431 ORTHO05D007918 9.2e-155 551.2 567 51.9
Lalb_Chr20g0111521 Lupinus albus HOM05D006431 ORTHO05D007918 1.2e-154 550.8 565 51.2
Cc00_g18360 Coffea canephora HOM05D006431 ORTHO05D007918 4.6e-154 548.9 570 52.8
PSO801G0006 Papaver somniferum HOM05D006431 ORTHO05D007918 4.6e-154 548.9 565 49.9
CAN.G841.8 Capsicum annuum HOM05D006431 ORTHO05D007918 1.0e-153 547.7 565 51.9
Psat3g030600 Pisum sativum HOM05D006431 ORTHO05D007918 1.0e-153 547.7 565 51.2
PSO801G0231 Papaver somniferum HOM05D006431 ORTHO05D007918 2.3e-153 546.6 565 49.7
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 2.3e-153 546.6 566 51.8
VMungo1383G3444 Vigna mungo HOM05D006431 ORTHO05D007918 2.3e-153 546.6 566 51.2
Sed0017910 Sechium edule HOM05D006431 ORTHO05D007918 1.5e-152 543.9 568 51.4
Eucgr.A02614 Eucalyptus grandis HOM05D006431 ORTHO05D007918 3.3e-152 542.7 567 51.7
Peaxi162Scf01662g00115 Petunia axillaris HOM05D006431 ORTHO05D007918 4.3e-152 542.3 563 50.6
FAN09G4399 Fragaria x ananassa HOM05D006431 ORTHO05D007918 1.6e-151 540.4 566 52.5
Prupe.7G099200 Prunus persica HOM05D006431 ORTHO05D007918 2.8e-151 539.7 567 51.5
MELO3C009510.2 Cucumis melo HOM05D006431 ORTHO05D007918 6.2e-151 538.5 573 50.3
Nn2g14247 Nelumbo nucifera HOM05D006431 ORTHO05D007918 4.4e-149 532.3 565 50.6
DCAR_013426 Daucus carota HOM05D006431 ORTHO05D007918 1.3e-148 530.8 565 50.4
AT5G06260 Arabidopsis thaliana HOM05D006431 ORTHO05D007918 4.9e-148 528.9 564 49.3
BcaC06g32355 Brassica carinata HOM05D006431 ORTHO05D007918 4.9e-148 528.9 568 49.6
Carub.0006s0514 Capsella rubella HOM05D006431 ORTHO05D007918 6.4e-148 528.5 566 49.6
MSTRG.26617 Avicennia marina HOM05D006431 ORTHO05D007918 1.1e-147 527.7 565 50.4
C09p70630 Brassica napus HOM05D006431 ORTHO05D007918 1.9e-147 526.9 564 49.3
Sopen10g032630 Solanum pennellii HOM05D006431 ORTHO05D007918 1.9e-147 526.9 565 50.6
SGA_v2.0_scaffold35G14028 Striga asiatica HOM05D006431 ORTHO05D007918 3.2e-147 526.2 565 49.9
Solyc10g083160.2 Solanum lycopersicum HOM05D006431 ORTHO05D007918 4.1e-147 525.8 565 50.6
HanXRQChr01g0025171 Helianthus annuus HOM05D006431 ORTHO05D007918 5.4e-147 525.4 565 49.9
CARHR206960 Cardamine hirsuta HOM05D006431 ORTHO05D007918 9.2e-147 524.6 564 49.5
AL6G16280 Arabidopsis lyrata HOM05D006431 ORTHO05D007918 1.6e-146 523.9 565 49.4
Sp6g36610 Schrenkiella parvula HOM05D006431 ORTHO05D007918 3.5e-146 522.7 564 49.1
BraA10t45060Z Brassica rapa HOM05D006431 ORTHO05D007918 4.6e-146 522.3 564 49.3
ECA248G2099 Erigeron canadensis HOM05D006431 ORTHO05D007918 2.3e-145 520.0 566 48.6
Nitab4.5_0001801g0020 Nicotiana tabacum HOM05D006431 ORTHO05D007918 2.3e-145 520.0 567 50.1
Cpa.g.sc104.72 Carica papaya HOM05D006431 ORTHO05D007918 6.6e-145 518.5 563 50.1
BcaC06g32336 Brassica carinata HOM05D006431 ORTHO05D007918 2.5e-144 516.5 564 48.8
BolC9t59819H Brassica oleracea HOM05D006431 ORTHO05D007918 2.5e-144 516.5 564 48.8
Thhalv10013633m.g Eutrema salsugineum HOM05D006431 ORTHO05D007918 6.2e-143 511.9 564 47.3
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 5.2e-142 508.8 565 47.1
Dinv31736 Davidia involucrata HOM05D006431 ORTHO05D007918 1.2e-141 507.7 565 50.1
Lsat_1_v5_gn_1_57580 Lactuca sativa HOM05D006431 ORTHO05D007918 2.0e-141 506.9 558 49.1
Migut.L01812 Erythranthe guttata HOM05D006431 ORTHO05D007918 1.3e-140 504.2 565 47.6
HPP92_023016 Vanilla planifolia HOM05D006431 ORTHO05D007918 1.4e-139 500.7 565 46.4
Duzib093G0136 Durio zibethinus HOM05D006431 ORTHO05D007918 1.9e-139 500.4 564 48.2
Hund03878 Selenicereus undatus HOM05D006431 ORTHO05D007918 4.1e-139 499.2 564 47.3
Ah.15g090560 Amaranthus hybridus HOM05D006431 ORTHO05D007918 1.2e-138 497.7 577 46.6
AUR62006262 Chenopodium quinoa HOM05D006431 ORTHO05D007918 2.1e-138 496.9 565 47.8
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 6.0e-138 495.4 565 48.3
AUR62028512 Chenopodium quinoa HOM05D006431 ORTHO05D007918 1.7e-137 493.8 565 47.8
Os12g0157200 Oryza sativa ssp. japonica HOM05D006431 ORTHO05D007918 2.4e-134 483.4 569 44.8
unitig_899.g15199 Utricularia gibba HOM05D006431 ORTHO05D007918 4.0e-134 482.6 565 45.8
SalBow5G2287 Salvia bowleyana HOM05D006431 ORTHO05D007918 9.9e-133 478.0 565 47.4
Zm00001eb407020 Zea mays HOM05D006431 ORTHO05D007918 1.9e-131 473.8 570 45.3
Aa31sc52G40 Aethionema arabicum HOM05D006431 ORTHO05D007918 5.4e-131 472.2 639 42.3
Ca_09036_v3 Cicer arietinum L. HOM05D006431 ORTHO05D007918 5.4e-131 472.2 548 46.2
COL.COLO4_29622 Corchorus olitorius HOM05D006431 ORTHO05D007918 5.1e-129 465.7 501 48.9
A10p30220 Brassica napus HOM05D006431 ORTHO05D007918 1.9e-128 463.8 512 47.9
Oeu017704.1 Olea europaea HOM05D006431 ORTHO05D007918 1.1e-126 458.0 526 48.3
Sc02g0000490 Simmondsia chinensis HOM05D006431 ORTHO05D007918 2.4e-115 420.2 487 47.0
PSO339G1068 Papaver somniferum HOM05D006431 ORTHO05D007918 3.9e-113 412.9 376 54.5
Pp3c10_6920 Physcomitrium patens HOM05D006431 ORTHO05D007918 3.8e-108 396.4 566 38.3
Lj1A1036G18 Lonicera japonica HOM05D006431 ORTHO05D007918 1.3e-103 381.3 449 47.2
Mapoly0002s0288 Marchantia polymorpha HOM05D006431 ORTHO05D007918 1.3e-103 381.3 571 38.7
SMO358G0080 Selaginella moellendorffii HOM05D006431 ORTHO05D007918 4.5e-101 372.9 569 37.4
CDE12G0869 Ceratophyllum demersum HOM05D006431 ORTHO05D007918 7.4e-96 355.5 566 38.0
AT4G34070 Arabidopsis thaliana HOM05D006431 ORTHO05D007918 3.3e-88 330.1 259 62.5
MBI17_g39691_MAGBIO Magnolia biondii HOM05D006431 ORTHO05D007918 2.9e-84 317.0 369 45.8
MBI17_g45031_MAGBIO Magnolia biondii HOM05D006431 ORTHO05D007918 1.1e-83 315.1 369 45.8
MBI18_g45360_MAGBIO Magnolia biondii HOM05D006431 ORTHO05D007918 1.6e-77 294.7 369 43.1
AagrBONN_evm.TU.Sc2ySwM_368.1429 Anthoceros agrestis HOM05D006431 ORTHO05D007918 3.8e-76 290.0 410 38.5
Nitab4.5_0006555g0060 Nicotiana tabacum HOM05D006431 ORTHO05D007918 6.1e-74 282.7 473 37.4
Thhalv10029204m.g Eutrema salsugineum HOM05D006431 ORTHO05D007918 5.9e-53 213.0 432 32.2
MBI17_g46230_MAGBIO Magnolia biondii HOM05D006431 ORTHO05D007918 1.4e-46 191.8 188 48.4
MBI17_g27947_MAGBIO Magnolia biondii HOM05D006431 ORTHO05D007918 2.4e-46 191.0 180 50.0
Nitab4.5_0006555g0050 Nicotiana tabacum HOM05D006431 ORTHO05D007918 9.2e-38 162.5 116 70.7
SEGI_02239 Sequoiadendron giganteum HOM05D006431 ORTHO05D007918 1.8e-33 148.3 158 44.3
TAR623G0798 Trochodendron aralioides HOM05D006431 ORTHO05D007918 6.8e-33 146.4 165 52.7
SEGI_13589 Sequoiadendron giganteum HOM05D006431 ORTHO05D007918 2.9e-31 141.0 107 56.1
HPP92_023056 Vanilla planifolia HOM05D006431 ORTHO05D007918 1.9e-30 138.3 97 66.0
AT2G45380 Arabidopsis thaliana HOM05D002260 ORTHO05D000476 5.2e-25 120.2 86 70.9
Hma1.2p1_0064F.1_g034930 Hydrangea macrophylla HOM05D006431 ORTHO05D007918 1.4e-22 112.1 87 65.5
Hma1.2p1_1131F.1_g260030 Hydrangea macrophylla HOM05D006431 ORTHO05D007918 1.4e-22 112.1 87 65.5
CsaV3_1G024120 Cucumis sativus L. HOM05D006431 ORTHO05D007918 5.4e-22 110.2 100 52.0
Cre10.g436950 Chlamydomonas reinhardtii HOM05D006431 ORTHO05D007918 2.4e-17 94.7 173 30.1
HPP92_023055 Vanilla planifolia HOM05D006431 ORTHO05D007918 1.7e-15 88.6 63 60.3
Actinidia32065 Actinidia chinensis HOM05D006431 ORTHO05D007918 4.0e-09 67.4 43 67.4
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 1.3e-07 62.4 51 64.7
FAN03G0727 Fragaria x ananassa HOM05D015851 ORTHO05D020632 7.1e-06 56.6 61 49.2


User provided reference genes

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