Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 1.1e-54 216.5 111 100.0
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 4.6e-34 147.9 87 87.4
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 1.7e-28 129.4 86 80.2
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 3.8e-28 128.3 77 84.4
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 4.5e-21 104.8 79 70.9
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 7.6e-21 104.0 73 74.0
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 7.6e-21 104.0 74 75.7
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 2.2e-20 102.4 70 75.7
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 3.8e-20 101.7 70 75.7
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 3.8e-20 101.7 69 73.9
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 1.9e-19 99.4 72 70.8
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 1.2e-18 96.7 79 64.6
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 2.1e-18 95.9 87 60.9
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 3.5e-18 95.1 78 64.1
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 3.5e-18 95.1 103 52.4
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 7.9e-18 94.0 74 67.6
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 7.9e-18 94.0 91 57.1
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 7.9e-18 94.0 91 57.1
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 1.0e-17 93.6 78 62.8
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 1.0e-17 93.6 71 67.6
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.8e-17 92.8 103 55.3
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 3.0e-17 92.0 76 65.8
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 3.0e-17 92.0 87 57.5
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 3.0e-17 92.0 74 67.6
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 3.9e-17 91.7 77 64.9
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 3.9e-17 91.7 105 54.3
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 6.7e-17 90.9 102 52.0
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 1.5e-16 89.7 70 65.7
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 1.9e-16 89.4 86 58.1
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 2.5e-16 89.0 89 57.3
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 2.5e-16 89.0 97 53.6
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 3.3e-16 88.6 78 60.3
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.3e-16 88.2 78 60.3
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 9.7e-16 87.0 87 56.3
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 1.3e-15 86.7 74 63.5
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 1.3e-15 86.7 88 56.8
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 1.3e-15 86.7 68 69.1
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 1.6e-15 86.3 75 61.3
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.6e-15 86.3 65 70.8
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.2e-15 85.9 97 53.6
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.2e-15 85.9 97 53.6
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 2.2e-15 85.9 86 57.0
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 2.8e-15 85.5 69 66.7
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 2.8e-15 85.5 97 53.6
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.8e-15 85.5 97 53.6
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.8e-15 85.5 97 53.6
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 4.8e-15 84.7 86 57.0
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 6.3e-15 84.3 78 56.4
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 6.3e-15 84.3 87 56.3
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.3e-15 84.3 92 55.4
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 8.2e-15 84.0 76 60.5
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 8.2e-15 84.0 68 66.2
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 1.1e-14 83.6 70 62.9
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 66.2
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 66.2
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 66.2
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 66.2
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 66.2
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 66.2
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 1.4e-14 83.2 68 64.7
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 1.8e-14 82.8 78 55.1
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 2.4e-14 82.4 69 65.2
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 2.4e-14 82.4 87 55.2
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 3.1e-14 82.0 68 66.2
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 4.1e-14 81.6 77 62.3
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 4.1e-14 81.6 67 64.2
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 6.9e-14 80.9 65 70.8
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.2e-13 80.1 105 45.7
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 1.5e-13 79.7 68 61.8
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 1.5e-13 79.7 71 60.6
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 2.0e-13 79.3 69 65.2
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 2.6e-13 79.0 68 60.3
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 2.6e-13 79.0 68 60.3
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 4.5e-13 78.2 64 70.3
BcaC07g39601 Brassica carinata HOM05D005113 ORTHO05D006045 1.0e-12 77.0 68 61.8
C08p27550 Brassica napus HOM05D005113 ORTHO05D006045 1.0e-12 77.0 68 61.8
BolC8t50376H Brassica oleracea HOM05D005113 ORTHO05D006045 1.0e-12 77.0 68 61.8
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 1.0e-12 77.0 85 50.6
AL4G31960 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 1.3e-12 76.6 67 58.2
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 3.8e-12 75.1 64 62.5
HPP92_012153 Vanilla planifolia HOM05D005113 ORTHO05D006045 3.8e-12 75.1 68 60.3
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 5.0e-12 74.7 100 47.0
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 8.5e-12 73.9 69 65.2
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.4e-11 73.2 83 49.4
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 3.2e-11 72.0 64 57.8
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 3.2e-11 72.0 79 51.9
A04p27340 Brassica napus HOM05D005113 ORTHO05D006045 4.2e-11 71.6 74 55.4
BcaB01g03875 Brassica carinata HOM05D005113 ORTHO05D006045 1.6e-10 69.7 73 54.8
PGR004G1479 Punica granatum HOM05D005113 ORTHO05D006045 2.1e-10 69.3 83 51.8
Carub.0004s1761 Capsella rubella HOM05D005113 ORTHO05D006045 3.6e-10 68.6 67 55.2
CARHR130110 Cardamine hirsuta HOM05D005113 ORTHO05D006045 3.6e-10 68.6 71 52.1
BraA04t18232Z Brassica rapa HOM05D005113 ORTHO05D006045 4.6e-10 68.2 74 51.4
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 1.4e-09 66.6 69 56.5
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 1.8e-09 66.2 77 50.6
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.8e-09 66.2 76 52.6
COL.COLO4_29500 Corchorus olitorius HOM05D005113 ORTHO05D006045 1.8e-09 66.2 65 58.5
BcaB06g28884 Brassica carinata HOM05D005113 ORTHO05D006045 2.3e-09 65.9 73 50.7
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 2.3e-09 65.9 71 52.1
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 2.3e-09 65.9 96 43.8
PSO384G4604 Papaver somniferum HOM05D005113 ORTHO05D006045 3.0e-09 65.5 99 42.4
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 6.7e-09 64.3 69 50.7
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 8.8e-09 63.9 79 46.8
BolC4t27961H Brassica oleracea HOM05D005113 ORTHO05D006045 8.8e-09 63.9 73 49.3
AT2G35850 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 1.1e-08 63.5 67 52.2
BcaC02g07662 Brassica carinata HOM05D005113 ORTHO05D006045 1.1e-08 63.5 73 49.3
C04p64840 Brassica napus HOM05D005113 ORTHO05D006045 1.1e-08 63.5 81 48.1
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 1.5e-08 63.2 87 43.7
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 1.5e-08 63.2 67 55.2
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 1.9e-08 62.8 59 55.9
BcaC01g05698 Brassica carinata HOM05D005113 ORTHO05D006045 2.5e-08 62.4 71 52.1
BolC3t14709H Brassica oleracea HOM05D005113 ORTHO05D006045 2.5e-08 62.4 71 52.1
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 2.5e-08 62.4 84 46.4
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 2.5e-08 62.4 58 58.6
A03p19780 Brassica napus HOM05D005113 ORTHO05D006045 3.3e-08 62.0 86 46.5
BraA03t11230Z Brassica rapa HOM05D005113 ORTHO05D006045 3.3e-08 62.0 86 46.5
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 5.7e-08 61.2 53 66.0
C03p23070 Brassica napus HOM05D005113 ORTHO05D006045 7.4e-08 60.8 71 50.7
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 1.7e-07 59.7 86 44.2
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.7e-07 59.7 59 55.9
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 1.7e-07 59.7 53 64.2
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 3.7e-07 58.5 66 48.5
A09p45390 Brassica napus HOM05D005113 ORTHO05D006045 6.3e-07 57.8 75 52.0
BraA09t40003Z Brassica rapa HOM05D005113 ORTHO05D006045 6.3e-07 57.8 68 51.5
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 1.1e-06 57.0 86 41.9
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 1.4e-06 56.6 73 53.4
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 1.4e-06 56.6 85 41.2
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 1.4e-06 56.6 59 50.8
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 1.8e-06 56.2 70 44.3
arahy.Tifrunner.gnm1.ann1.HSX17H Arachis hypogaea HOM05D005113 ORTHO05D006045 2.4e-06 55.8 77 40.3
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 2.4e-06 55.8 70 44.3
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 2.4e-06 55.8 70 44.3
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 6.9e-06 54.3 51 60.8
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 9.1e-06 53.9 73 45.2
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 9.1e-06 53.9 78 41.0


User provided reference genes

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