Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 0.0e+00 1703.7 879 100.0
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 0.0e+00 1171.4 754 82.0
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 0.0e+00 1156.7 754 81.2
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 0.0e+00 1155.2 761 81.2
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 3.6e-299 1031.6 834 67.4
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 1.9e-292 1009.2 764 70.7
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 2.3e-285 985.7 893 61.9
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 2.4e-282 975.7 768 68.8
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 2.3e-277 959.1 754 68.2
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 5.1e-277 958.0 756 67.9
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.5e-276 956.4 831 63.1
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 1.5e-276 956.4 764 67.3
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 3.1e-274 948.7 753 68.3
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 7.6e-273 944.1 763 67.6
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.9e-272 942.2 757 67.0
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 2.9e-272 942.2 763 66.7
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 6.4e-272 941.0 831 62.1
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 5.4e-271 937.9 913 59.0
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 1.5e-268 929.9 758 66.6
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 9.6e-268 927.2 755 66.6
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 3.4e-265 918.7 753 65.2
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 1.3e-264 916.8 761 65.2
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 5.4e-263 911.4 723 68.5
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 6.0e-262 907.9 759 64.6
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.3e-261 906.7 758 64.8
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 8.7e-261 904.0 759 64.3
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 1.5e-260 903.3 755 64.6
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.5e-260 902.5 783 63.6
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 2.1e-259 899.4 755 64.4
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 6.9e-258 894.4 793 62.3
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 1.2e-257 893.6 759 64.3
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 1.5e-257 893.3 755 65.0
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 5.8e-257 891.3 754 63.7
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 7.6e-257 891.0 763 64.9
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 1.9e-255 886.3 755 63.7
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 1.2e-254 883.6 789 62.7
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 1.0e-253 880.6 759 63.9
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 1.8e-253 879.8 765 62.4
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 3.9e-253 878.6 760 63.6
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.3e-251 873.6 840 58.0
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 1.8e-250 869.8 779 62.4
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 2.4e-250 869.4 755 62.5
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 3.1e-250 869.0 788 61.2
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 2.0e-249 866.3 844 56.2
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 4.5e-249 865.1 761 62.5
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 5.5e-247 858.2 762 61.7
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 7.9e-246 854.4 826 58.7
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 2.5e-244 849.4 749 59.7
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 7.4e-244 847.8 754 60.6
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 2.8e-243 845.9 773 60.0
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 1.8e-242 843.2 755 61.5
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 2.5e-239 832.8 797 57.8
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 7.9e-238 827.8 792 58.2
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 4.3e-236 822.0 827 54.8
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 2.8e-235 819.3 760 59.9
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 4.8e-235 818.5 756 59.4
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 1.4e-234 817.0 762 59.2
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 1.5e-233 813.5 827 54.2
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 2.0e-233 813.1 752 58.1
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.7e-232 810.1 764 56.9
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 6.5e-232 808.1 699 63.5
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 3.2e-231 805.8 756 58.7
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 2.7e-230 802.7 760 59.2
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 1.0e-229 800.8 762 57.1
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 3.0e-229 799.3 827 54.2
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 1.3e-227 793.9 861 52.3
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 3.7e-227 792.3 778 57.1
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 5.3e-226 788.5 750 56.7
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 2.0e-225 786.6 754 56.5
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 2.6e-225 786.2 808 56.7
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 3.5e-225 785.8 842 52.4
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 3.5e-225 785.8 784 56.4
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 7.7e-225 784.6 756 56.7
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 1.3e-224 783.9 858 52.2
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 3.8e-224 782.3 928 52.0
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 3.1e-218 762.7 768 55.2
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 5.3e-218 761.9 757 55.2
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 1.3e-216 757.3 751 55.9
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 5.5e-215 751.9 749 55.0
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 4.7e-214 748.8 751 55.8
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 4.7e-214 748.8 766 54.0
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 2.3e-213 746.5 749 54.9
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 3.0e-213 746.1 741 54.1
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 2.0e-212 743.4 749 54.7
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 4.4e-212 742.3 740 55.8
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 8.3e-211 738.0 757 56.5
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.6e-201 707.2 653 60.2
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 1.0e-197 694.5 744 49.9
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 3.0e-197 693.0 836 48.8
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 3.0e-197 693.0 836 48.8
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 2.0e-196 690.3 754 52.0
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.4e-189 667.5 762 52.5
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 4.3e-183 646.0 849 46.5
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 2.8e-182 643.3 674 54.7
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 2.3e-181 640.2 749 49.9
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 7.1e-178 628.6 762 48.7
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 7.8e-169 598.6 434 69.4
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 7.3e-167 592.0 615 54.6
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 1.2e-164 584.7 752 44.4
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 3.0e-160 570.1 705 47.8
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 3.3e-159 566.6 612 53.4
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 1.8e-157 560.8 838 41.5
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 1.5e-156 557.8 512 64.1
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 6.9e-149 532.3 619 52.2
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 4.5e-148 529.6 372 71.0
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 4.8e-142 509.6 734 41.4
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 5.3e-141 506.1 593 47.2
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 6.9e-141 505.8 447 57.7
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 2.5e-130 470.7 500 55.2
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 7.2e-130 469.2 547 51.6
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 8.5e-115 419.1 260 77.7
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 2.9e-99 367.5 583 40.0
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 7.2e-90 336.3 534 44.2
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 4.1e-85 320.5 354 50.3
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 1.1e-77 295.8 194 73.2
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 2.4e-77 294.7 232 69.8
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 2.1e-60 238.4 219 55.3
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.1e-60 238.4 173 71.1
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.4e-53 214.9 143 71.3
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 1.4e-45 189.1 141 63.8
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 2.4e-45 188.3 143 62.9
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.1e-44 185.3 118 75.4
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 3.3e-42 177.9 141 61.0
Psat4g142720 Pisum sativum HOM05D003784 ORTHO05D004345 4.2e-37 161.0 99 75.8
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 7.1e-37 160.2 114 70.2
Psat4g142800 Pisum sativum HOM05D003784 ORTHO05D004345 5.8e-31 140.6 86 75.6
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-29 134.8 155 40.6
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 1.3e-25 122.9 101 61.4
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 3.7e-25 121.3 92 62.0
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 4.8e-25 120.9 91 64.8
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 6.2e-25 120.6 110 55.5
Nn3g18463 Nelumbo nucifera HOM05D004031 ORTHO05D006678 1.1e-24 119.8 74 77.0
CBR_g32659 Chara braunii HOM05D001409 ORTHO05D001511 4.6e-20 104.4 153 37.3
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 3.9e-19 101.3 55 87.3
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 1.9e-18 99.0 55 85.5
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 5.7e-18 97.4 209 31.1
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 2.1e-17 95.5 60 75.0
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 3.7e-17 94.7 55 80.0
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 4.8e-17 94.4 54 81.5
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 2.4e-16 92.0 65 63.1
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 5.3e-16 90.9 56 75.0
Cre08.g370250 Chlamydomonas reinhardtii HOM05D004031 ORTHO05D006678 5.3e-16 90.9 544 21.0
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 6.9e-16 90.5 55 78.2
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 9.0e-16 90.1 71 60.6
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 1.2e-15 89.7 55 76.4
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 2.0e-15 89.0 60 68.3
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 2.0e-15 89.0 54 72.2
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 3.4e-15 88.2 54 72.2
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 5.9e-15 87.4 55 76.4
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 7.6e-15 87.0 54 68.5
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 1.0e-14 86.7 59 69.5
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 1.3e-14 86.3 55 74.5
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 1.3e-14 86.3 55 70.9
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 1.7e-14 85.9 53 75.5
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 1.7e-14 85.9 53 77.4
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 2.2e-14 85.5 54 72.2
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 3.8e-14 84.7 55 72.7
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 3.8e-14 84.7 50 76.0
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 8.5e-14 83.6 60 65.0
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 8.5e-14 83.6 54 68.5
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 3.2e-13 81.6 55 67.3
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 4.2e-13 81.3 57 68.4
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 5.5e-13 80.9 56 67.9
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 7.2e-13 80.5 56 67.9
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 1.6e-12 79.3 56 67.9
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 2.7e-12 78.6 50 70.0
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-11 75.5 58 58.6
Nn2g13219 Nelumbo nucifera HOM05D004031 ORTHO05D006678 3.0e-11 75.1 54 66.7
Hund07844 Selenicereus undatus HOM05D004031 ORTHO05D006678 1.5e-10 72.8 65 58.5
MCO13G277 Micromonas commoda HOM05D004031 ORTHO05D006678 1.6e-09 69.3 290 27.2
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 1.8e-08 65.9 69 52.2
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 5.9e-07 60.8 33 75.8
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 1.0e-06 60.1 32 81.2
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 3.8e-06 58.2 34 73.5
Sed0004834 Sechium edule HOM05D004031 ORTHO05D011186 5.0e-06 57.8 65 46.2


User provided reference genes

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