Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0147800 Salix brachista HOM05D002612 ORTHO05D002859 3.2e-139 498.4 253 100.0
Sabra16G0049300 Salix brachista HOM05D002612 ORTHO05D002859 1.3e-20 104.4 77 63.6
Manes.09G035700 Manihot esculenta HOM05D002612 ORTHO05D002859 3.8e-15 86.3 74 56.8
Potri.016G045401 Populus trichocarpa HOM05D002612 ORTHO05D002859 1.6e-13 80.9 108 44.4
Thecc.05G171700 Theobroma cacao HOM05D002612 ORTHO05D002859 3.5e-13 79.7 92 45.7
Prupe.7G077400 Prunus persica HOM05D002612 ORTHO05D002859 1.3e-12 77.8 75 56.0
CiPaw.10G026200 Carya illinoinensis HOM05D002612 ORTHO05D002859 2.3e-12 77.0 75 56.0
COL.COLO4_33978 Corchorus olitorius HOM05D005723 ORTHO05D005968 1.5e-11 74.3 81 44.4
Hma1.2p1_0676F.1_g201950 Hydrangea macrophylla HOM05D002612 ORTHO05D002859 7.3e-11 72.0 72 52.8
Dinv24067 Davidia involucrata HOM05D002612 ORTHO05D002859 1.2e-10 71.2 77 48.1
TWI74G1029 Tripterygium wilfordii HOM05D002612 ORTHO05D002859 1.2e-10 71.2 76 48.7
TAR623G0372 Trochodendron aralioides HOM05D002612 ORTHO05D002859 1.2e-10 71.2 73 47.9
Duzib106G0243 Durio zibethinus HOM05D002612 ORTHO05D002859 1.6e-10 70.9 63 52.4
RcHm_v2.0_Chr3g0479541 Rosa chinensis HOM05D002612 ORTHO05D002859 2.1e-10 70.5 78 48.7
Sabra06G0180300 Salix brachista HOM05D000389 ORTHO05D000287 2.1e-10 70.5 41 95.1
Cfa020162 Carpinus fangiana HOM05D002612 ORTHO05D002859 2.8e-10 70.1 70 51.4
MD12G1056800 Malus domestica HOM05D002612 ORTHO05D002859 3.6e-10 69.7 74 45.9
THA.LOC104802604 Tarenaya hassleriana HOM05D002612 ORTHO05D002859 1.1e-09 68.2 73 46.6
FvH4_6g22210 Fragaria vesca HOM05D002612 ORTHO05D002859 1.8e-09 67.4 78 46.2
GSVIVG01033493001 Vitis vinifera HOM05D002612 ORTHO05D002859 1.8e-09 67.4 74 51.4
FAN14G2805 Fragaria x ananassa HOM05D002612 ORTHO05D002859 3.1e-09 66.6 89 42.7
Atru.chr8.1116 Acer truncatum HOM05D002612 ORTHO05D002859 4.0e-09 66.2 75 44.0
Eucgr.K01842 Eucalyptus grandis HOM05D002612 ORTHO05D002859 6.9e-09 65.5 74 47.3
Gohir.A09G128100 Gossypium hirsutum HOM05D002612 ORTHO05D002859 6.9e-09 65.5 83 38.6
Psat6g091240 Pisum sativum HOM05D002612 ORTHO05D002859 6.9e-09 65.5 84 42.9
Ca_12071_v3 Cicer arietinum L. HOM05D002612 ORTHO05D002859 9.0e-09 65.1 86 46.5
Duzib128G1439 Durio zibethinus HOM05D002612 ORTHO05D002859 9.0e-09 65.1 70 42.9
FAN14G3252 Fragaria x ananassa HOM05D002612 ORTHO05D002859 1.2e-08 64.7 78 44.9
ClCG10G017560 Citrullus lanatus HOM05D002612 ORTHO05D002859 1.5e-08 64.3 232 29.3
Gohir.D09G124100 Gossypium hirsutum HOM05D002612 ORTHO05D002859 1.5e-08 64.3 64 46.9
Gorai.006G142900 Gossypium raimondii HOM05D002612 ORTHO05D002859 1.5e-08 64.3 64 46.9
Nitab4.5_0000324g0010 Nicotiana tabacum HOM05D002612 ORTHO05D002859 2.0e-08 63.9 71 47.9
MD14G1056500 Malus domestica HOM05D002612 ORTHO05D002859 3.4e-08 63.2 75 44.0
Nitab4.5_0002488g0060 Nicotiana tabacum HOM05D002612 ORTHO05D002859 7.6e-08 62.0 71 47.9
Ciclev10012465m.g Citrus clementina HOM05D002612 ORTHO05D002859 9.9e-08 61.6 69 37.7
Glyma.02G172700 Glycine max HOM05D002612 ORTHO05D002859 9.9e-08 61.6 71 47.9
TPR.G32347 Trifolium pratense HOM05D002612 ORTHO05D002859 9.9e-08 61.6 69 42.0
Peaxi162Scf00258g00631 Petunia axillaris HOM05D002612 ORTHO05D002859 1.1e-06 58.2 73 45.2
Actinidia22037 Actinidia chinensis HOM05D002612 ORTHO05D002859 1.4e-06 57.8 81 39.5
PSO675G2711 Papaver somniferum HOM05D002612 ORTHO05D002859 1.4e-06 57.8 70 42.9
Nn2g15693 Nelumbo nucifera HOM05D002612 ORTHO05D002859 2.4e-06 57.0 107 36.4
CsaV3_3G038780 Cucumis sativus L. HOM05D002612 ORTHO05D002859 4.2e-06 56.2 85 35.3
Lalb_Chr18g0047881 Lupinus albus HOM05D002612 ORTHO05D002859 4.2e-06 56.2 72 43.1
EL10Ac3g06912 Beta vulgaris HOM05D002612 ORTHO05D002859 5.4e-06 55.8 78 39.7
CANSAT64G1369 Cannabis sativa HOM05D002612 ORTHO05D002859 5.4e-06 55.8 75 44.0
Carub.0004s2442 Capsella rubella HOM05D002612 ORTHO05D002859 5.4e-06 55.8 74 39.2
AL4G40440 Arabidopsis lyrata HOM05D002612 ORTHO05D002859 7.1e-06 55.5 74 39.2
MBI06_g15023_MAGBIO Magnolia biondii HOM05D002612 ORTHO05D002859 7.1e-06 55.5 128 31.2
Sed0006567 Sechium edule HOM05D002612 ORTHO05D002859 7.1e-06 55.5 61 45.9
arahy.Tifrunner.gnm1.ann1.47DXFL Arachis hypogaea HOM05D002612 ORTHO05D002859 9.3e-06 55.1 67 44.8
arahy.Tifrunner.gnm1.ann1.J786L6 Arachis hypogaea HOM05D002612 ORTHO05D002859 9.3e-06 55.1 67 44.8


User provided reference genes

Program Settings