Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0145900 Salix brachista HOM05D007046 ORTHO05D008788 1.3e-179 633.3 387 100.0
Potri.006G189900 Populus trichocarpa HOM05D007046 ORTHO05D008788 1.6e-73 280.8 387 45.5
Manes.14G138900 Manihot esculenta HOM05D007046 ORTHO05D008788 1.5e-63 247.7 387 40.3
CiPaw.15G181500 Carya illinoinensis HOM05D007046 ORTHO05D008788 6.5e-59 232.3 385 38.4
TWI63G1442 Tripterygium wilfordii HOM05D007046 ORTHO05D008788 6.5e-59 232.3 389 38.6
Cfa020888 Carpinus fangiana HOM05D007046 ORTHO05D008788 3.2e-58 229.9 382 38.7
VMungo1309G1390 Vigna mungo HOM05D007046 ORTHO05D008788 3.2e-58 229.9 385 37.9
Atru.chr7.254 Acer truncatum HOM05D007046 ORTHO05D008788 1.2e-57 228.0 389 38.0
Haze_19316 Corylus avellana HOM05D007046 ORTHO05D008788 1.2e-57 228.0 390 38.5
Glyma.15G202300 Glycine max HOM05D007046 ORTHO05D008788 2.1e-57 227.3 385 37.7
QL02p091361 Quercus lobata HOM05D007046 ORTHO05D008788 2.7e-57 226.9 384 37.5
vmacro06109 Vaccinium macrocarpon HOM05D007046 ORTHO05D008788 3.6e-57 226.5 385 38.7
CSS0047212 Camellia sinensis var. sinensis HOM05D007046 ORTHO05D008788 1.8e-56 224.2 390 37.2
PSO210G0748 Papaver somniferum HOM05D007046 ORTHO05D008788 2.3e-56 223.8 383 37.9
Aqoxy7G03530 Aquilegia oxysepala HOM05D007046 ORTHO05D008788 6.7e-56 222.2 382 37.2
CsaV3_2G003530 Cucumis sativus L. HOM05D007046 ORTHO05D008788 6.7e-56 222.2 390 37.4
Lj6g0012248 Lotus japonicus HOM05D007046 ORTHO05D008788 6.7e-56 222.2 385 36.9
Gohir.A06G049800 Gossypium hirsutum HOM05D007046 ORTHO05D008788 1.1e-55 221.5 390 37.4
ClCG02G017260 Citrullus lanatus HOM05D007046 ORTHO05D008788 2.5e-55 220.3 390 37.2
Rhsim03G0254300 Rhododendron simsii HOM05D007046 ORTHO05D008788 2.5e-55 220.3 385 35.8
MELO3C004443.2 Cucumis melo HOM05D007046 ORTHO05D008788 3.3e-55 219.9 390 37.2
MBI15_g31411_MAGBIO Magnolia biondii HOM05D007046 ORTHO05D008788 3.3e-55 219.9 390 37.2
PSO447G0221 Papaver somniferum HOM05D007046 ORTHO05D008788 4.3e-55 219.5 383 37.3
Gohir.D06G049100 Gossypium hirsutum HOM05D007046 ORTHO05D008788 5.7e-55 219.2 390 37.2
Dinv42912 Davidia involucrata HOM05D007046 ORTHO05D008788 1.3e-54 218.0 390 36.9
Dinv43188 Davidia involucrata HOM05D007046 ORTHO05D008788 1.3e-54 218.0 390 36.9
arahy.Tifrunner.gnm1.ann1.I71V0M Arachis hypogaea HOM05D007046 ORTHO05D008788 1.7e-54 217.6 385 36.9
Lalb_Chr11g0072851 Lupinus albus HOM05D007046 ORTHO05D008788 1.7e-54 217.6 385 37.1
Sed0001104 Sechium edule HOM05D007046 ORTHO05D008788 1.7e-54 217.6 390 36.9
Ca_03117_v3 Cicer arietinum L. HOM05D007046 ORTHO05D008788 2.2e-54 217.2 384 36.5
PGR102G0910 Punica granatum HOM05D007046 ORTHO05D008788 2.2e-54 217.2 389 36.5
Medtr2g461260 Medicago truncatula HOM05D007046 ORTHO05D008788 3.7e-54 216.5 385 36.1
arahy.Tifrunner.gnm1.ann1.LM8BDD Arachis hypogaea HOM05D007046 ORTHO05D008788 4.8e-54 216.1 382 36.9
SGA_v2.0_scaffold229G43345 Striga asiatica HOM05D007046 ORTHO05D008788 8.2e-54 215.3 390 36.7
Migut.J01275 Erythranthe guttata HOM05D007046 ORTHO05D008788 1.8e-53 214.2 390 35.6
MD15G1159700 Malus domestica HOM05D007046 ORTHO05D008788 1.8e-53 214.2 387 36.7
Lj9A708G24 Lonicera japonica HOM05D007046 ORTHO05D008788 2.4e-53 213.8 392 36.0
TAR625G0755 Trochodendron aralioides HOM05D007046 ORTHO05D008788 3.1e-53 213.4 382 36.6
Oeu052181.1 Olea europaea HOM05D007046 ORTHO05D008788 4.1e-53 213.0 390 35.6
DCAR_008866 Daucus carota HOM05D007046 ORTHO05D008788 5.3e-53 212.6 390 35.9
Hund09318 Selenicereus undatus HOM05D007046 ORTHO05D008788 5.3e-53 212.6 390 35.1
Nn8g39721 Nelumbo nucifera HOM05D007046 ORTHO05D008788 6.9e-53 212.2 390 35.9
Cc06_g07400 Coffea canephora HOM05D007046 ORTHO05D008788 1.5e-52 211.1 390 35.9
CANSAT11G2023 Cannabis sativa HOM05D007046 ORTHO05D008788 3.4e-52 209.9 386 35.8
PGSC0003DMG400030738 Solanum tuberosum HOM05D007046 ORTHO05D008788 5.9e-52 209.1 390 35.6
Sopen07g003150 Solanum pennellii HOM05D007046 ORTHO05D008788 1.0e-51 208.4 390 35.4
THA.LOC104815395 Tarenaya hassleriana HOM05D007046 ORTHO05D008788 1.0e-51 208.4 389 35.7
Solyc07g007110.4 Solanum lycopersicum HOM05D007046 ORTHO05D008788 1.3e-51 208.0 390 35.4
MSTRG.19625 Avicennia marina HOM05D007046 ORTHO05D008788 1.7e-51 207.6 382 35.1
COL.COLO4_24098 Corchorus olitorius HOM05D007046 ORTHO05D008788 2.2e-51 207.2 390 36.2
Duzib168G1879 Durio zibethinus HOM05D007046 ORTHO05D008788 2.2e-51 207.2 390 36.7
Ah.14g078770 Amaranthus hybridus HOM05D007046 ORTHO05D008788 3.8e-51 206.5 392 34.9
Hma1.2p1_0949F.1_g240590 Hydrangea macrophylla HOM05D007046 ORTHO05D008788 3.8e-51 206.5 390 34.9
EL10Ac8g18815 Beta vulgaris HOM05D007046 ORTHO05D008788 1.1e-50 204.9 388 34.8
AUR62041451 Chenopodium quinoa HOM05D007046 ORTHO05D008788 1.1e-50 204.9 389 35.2
Hma1.2p1_1784F.1_g302170 Hydrangea macrophylla HOM05D007046 ORTHO05D008788 1.4e-50 204.5 382 34.6
BcaC07g37677 Brassica carinata HOM05D007046 ORTHO05D008788 1.9e-50 204.1 389 35.0
BolC8t48049H Brassica oleracea HOM05D007046 ORTHO05D008788 1.9e-50 204.1 390 35.6
AUR62011254 Chenopodium quinoa HOM05D007046 ORTHO05D008788 1.9e-50 204.1 382 35.3
A08p09580 Brassica napus HOM05D007046 ORTHO05D008788 2.5e-50 203.8 389 35.0
BraA08t32955Z Brassica rapa HOM05D007046 ORTHO05D008788 2.5e-50 203.8 389 35.0
Peaxi162Scf00347g00020 Petunia axillaris HOM05D007046 ORTHO05D008788 2.5e-50 203.8 390 35.4
Thecc.09G142000 Theobroma cacao HOM05D007046 ORTHO05D008788 4.2e-50 203.0 390 35.4
Lsat_1_v5_gn_7_47900 Lactuca sativa HOM05D007046 ORTHO05D008788 7.2e-50 202.2 389 34.2
SalBow1G5965 Salvia bowleyana HOM05D007046 ORTHO05D008788 9.4e-50 201.8 382 34.0
BcaB04g18062 Brassica carinata HOM05D007046 ORTHO05D008788 1.6e-49 201.1 392 34.9
Sc08g0005790 Simmondsia chinensis HOM05D007046 ORTHO05D008788 2.7e-49 200.3 390 33.3
ATR0629G031 Amborella trichopoda HOM05D007046 ORTHO05D008788 3.6e-49 199.9 378 34.4
CARHR217170 Cardamine hirsuta HOM05D007046 ORTHO05D008788 4.7e-49 199.5 391 35.5
Nitab4.5_0005384g0010 Nicotiana tabacum HOM05D007046 ORTHO05D008788 7.9e-49 198.7 390 34.9
Psat0s4009g0040 Pisum sativum HOM05D007046 ORTHO05D008788 1.4e-48 198.0 377 34.2
CDE02G2211 Ceratophyllum demersum HOM05D007046 ORTHO05D008788 2.3e-48 197.2 382 33.8
HanXRQChr03g0064041 Helianthus annuus HOM05D007046 ORTHO05D008788 2.3e-48 197.2 389 32.9
Aa31LG2G12340 Aethionema arabicum HOM05D007046 ORTHO05D008788 6.7e-48 195.7 391 34.8
AL7G43950 Arabidopsis lyrata HOM05D007046 ORTHO05D008788 8.8e-48 195.3 392 34.9
ECA240G3524 Erigeron canadensis HOM05D007046 ORTHO05D008788 1.1e-47 194.9 389 32.6
AT5G35100 Arabidopsis thaliana HOM05D007046 ORTHO05D008788 2.0e-47 194.1 392 34.9
Thhalv10004727m.g Eutrema salsugineum HOM05D007046 ORTHO05D008788 5.7e-47 192.6 392 33.9
Carub.0007s3089 Capsella rubella HOM05D007046 ORTHO05D008788 7.4e-47 192.2 392 34.7
Sp7g07260 Schrenkiella parvula HOM05D007046 ORTHO05D008788 7.4e-47 192.2 391 33.8
RcHm_v2.0_Chr2g0086651 Rosa chinensis HOM05D007046 ORTHO05D008788 1.3e-46 191.4 389 34.7
Os08g0292600 Oryza sativa ssp. japonica HOM05D007046 ORTHO05D008788 1.7e-46 191.0 388 32.5
Prupe.7G254600 Prunus persica HOM05D007046 ORTHO05D008788 2.8e-46 190.3 372 34.7
Gorai.010G056000 Gossypium raimondii HOM05D007046 ORTHO05D008788 4.8e-46 189.5 389 33.9
Phvul.009G211800 Phaseolus vulgaris HOM05D007046 ORTHO05D008788 3.1e-45 186.8 108 78.7
Glyma.09G095400 Glycine max HOM05D007046 ORTHO05D008788 4.5e-44 183.0 108 77.8
FAN23G1503 Fragaria x ananassa HOM05D007046 ORTHO05D008788 1.3e-43 181.4 389 33.7
Zm00001eb000740 Zea mays HOM05D007046 ORTHO05D008788 3.8e-43 179.9 388 31.4
CAN.G518.18 Capsicum annuum HOM05D007046 ORTHO05D008788 5.0e-43 179.5 366 33.3
Ciclev10009009m.g Citrus clementina HOM05D007046 ORTHO05D008788 1.9e-42 177.6 398 32.9
FAN26G3242 Fragaria x ananassa HOM05D007046 ORTHO05D008788 3.2e-42 176.8 389 33.4
FvH4_1g01710 Fragaria vesca HOM05D007046 ORTHO05D008788 9.4e-42 175.3 389 33.2
FAN19G0320 Fragaria x ananassa HOM05D007046 ORTHO05D008788 9.4e-42 175.3 389 33.2
FAN28G0193 Fragaria x ananassa HOM05D007046 ORTHO05D008788 9.4e-42 175.3 389 33.2
Nitab4.5_0001021g0040 Nicotiana tabacum HOM05D007046 ORTHO05D008788 6.1e-41 172.6 114 73.7
SEGI_22609 Sequoiadendron giganteum HOM05D007046 ORTHO05D008788 1.1e-39 168.3 113 66.4
AagrBONN_evm.TU.Sc2ySwM_117.689 Anthoceros agrestis HOM05D007046 ORTHO05D008788 2.0e-39 167.5 382 30.1
Nn6g34105 Nelumbo nucifera HOM05D007046 ORTHO05D008788 8.2e-38 162.2 111 68.5
Mapoly0218s0001 Marchantia polymorpha HOM05D007046 ORTHO05D008788 2.4e-37 160.6 390 29.2
GSVIVG01012898001 Vitis vinifera HOM05D007046 ORTHO05D008788 1.0e-35 155.2 390 31.3
Pp3c14_1150 Physcomitrium patens HOM05D007046 ORTHO05D008788 4.7e-33 146.4 390 27.7
TPR.G33523 Trifolium pratense HOM05D007046 ORTHO05D008788 2.0e-31 141.0 384 29.2
Actinidia26351 Actinidia chinensis HOM05D007046 ORTHO05D008788 5.7e-31 139.4 93 72.0
Eucgr.C04082 Eucalyptus grandis HOM05D007046 ORTHO05D008788 2.2e-27 127.5 73 79.5
SMO197G0077 Selaginella moellendorffii HOM05D007046 ORTHO05D008788 1.5e-26 124.8 123 46.3
Cre12.g561000 Chlamydomonas reinhardtii HOM05D007046 ORTHO05D008788 6.8e-24 115.9 120 47.5
COL.COLO4_19843 Corchorus olitorius HOM05D007046 ORTHO05D008788 1.6e-20 104.8 76 63.2
CBR_g31423 Chara braunii HOM05D007046 ORTHO05D008788 2.5e-18 97.4 86 53.5
Nn3g19287 Nelumbo nucifera HOM05D007046 ORTHO05D008788 8.9e-16 89.0 48 81.2
CBR_g31424 Chara braunii HOM05D007046 ORTHO05D008788 3.4e-15 87.0 74 51.4
MCO05G162 Micromonas commoda HOM05D007046 ORTHO05D008788 2.4e-13 80.9 123 36.6
PRCOL_00003052 Prasinoderma coloniale HOM05D007046 ORTHO05D008788 1.5e-10 71.6 128 38.3
Pp3c7_8500 Physcomitrium patens HOM05D000144 ORTHO05D030106 8.3e-06 55.8 106 32.1


User provided reference genes

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