Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 9.9e-255 882.9 420 100.0
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 6.4e-169 597.8 422 73.0
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.2e-164 581.3 420 71.7
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.6e-156 556.6 420 68.6
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 7.1e-152 541.2 415 65.5
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 2.7e-151 539.3 415 67.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.3e-150 537.0 407 66.6
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 6.6e-150 534.6 415 64.8
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.3e-149 532.3 415 65.5
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.1e-148 529.6 407 65.8
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 2.1e-148 529.6 407 65.8
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 4.7e-148 528.5 415 64.8
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 6.2e-148 528.1 406 65.5
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.1e-147 527.3 412 65.8
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.1e-147 525.8 407 64.6
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.1e-147 525.8 415 64.3
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 4.0e-147 525.4 407 66.3
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 4.0e-147 525.4 407 65.6
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 6.9e-147 524.6 407 65.8
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.2e-146 523.9 407 66.3
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.0e-146 523.1 406 65.5
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 4.4e-146 521.9 415 63.9
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 9.9e-146 520.8 413 63.9
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.3e-145 520.4 415 63.6
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.7e-145 520.0 415 64.3
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 2.9e-145 519.2 407 64.4
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.9e-145 519.2 405 65.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.4e-144 516.9 415 64.1
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.4e-144 516.2 415 64.1
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.2e-144 515.4 409 65.0
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 4.2e-144 515.4 406 64.8
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 5.4e-144 515.0 406 65.3
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 9.3e-144 514.2 406 63.8
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.7e-143 512.7 408 64.2
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.5e-143 512.3 415 63.9
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.3e-142 510.4 407 63.4
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.7e-142 510.0 406 65.0
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.1e-141 507.3 406 63.5
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.1e-141 507.3 407 63.4
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.1e-141 507.3 412 62.4
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 4.3e-141 505.4 407 63.1
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 5.6e-141 505.0 407 63.1
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 5.6e-141 505.0 406 63.5
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.6e-140 503.4 406 62.6
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 2.1e-140 503.1 407 63.1
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 2.8e-140 502.7 407 62.2
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 4.8e-140 501.9 419 61.1
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.8e-139 500.0 406 63.8
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 2.4e-139 499.6 406 61.8
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 3.1e-139 499.2 407 61.4
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 4.0e-139 498.8 406 63.5
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.5e-138 496.9 415 61.9
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.0e-138 496.5 407 62.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 7.6e-138 494.6 406 61.1
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.3e-137 493.8 411 61.8
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 1.7e-137 493.4 403 63.0
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.7e-137 493.4 406 61.6
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 4.9e-137 491.9 407 60.9
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 9.3e-136 487.6 406 61.6
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.6e-135 486.9 409 60.4
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.7e-135 486.1 409 60.4
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.7e-135 486.1 409 60.4
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.7e-135 486.1 409 60.4
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 4.6e-135 485.3 407 59.5
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 6.0e-135 485.0 409 60.1
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.1e-132 476.5 406 61.3
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 2.8e-132 476.1 397 62.2
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 2.4e-131 473.0 406 59.9
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.9e-125 453.4 408 57.4
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 5.8e-122 441.8 273 77.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 8.4e-121 438.0 396 57.8
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 8.4e-121 438.0 366 62.3
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 3.2e-120 436.0 406 56.4
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 2.7e-119 433.0 367 61.9
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 7.9e-119 431.4 271 76.8
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.8e-118 430.3 273 76.2
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.6e-116 423.7 406 55.2
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 6.9e-115 418.3 418 54.8
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 8.8e-110 401.4 406 53.7
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.5e-106 390.6 408 53.4
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.2e-103 380.9 405 47.4
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.8e-89 332.8 199 79.9
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 3.2e-88 329.7 274 62.0
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.7e-87 326.6 406 48.0
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.6e-85 320.1 191 78.5
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.8e-84 315.8 191 78.0
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 6.3e-84 315.5 197 75.1
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.8e-83 313.9 191 77.0
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 2.0e-82 310.5 183 79.2
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.0e-81 308.1 182 79.1
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.7e-81 307.4 183 77.0
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 6.5e-81 305.4 182 79.7
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 8.5e-81 305.1 182 78.6
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 1.1e-80 304.7 182 79.7
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 1.1e-80 304.7 182 78.6
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 1.5e-80 304.3 182 80.2
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 3.2e-80 303.1 183 78.1
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 2.7e-79 300.1 191 76.4
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.7e-79 299.3 183 76.5
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 3.4e-77 293.1 187 75.9
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 9.1e-75 285.0 267 56.9
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.6e-66 257.7 167 75.4
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 5.2e-62 242.7 351 37.6
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 1.8e-54 217.6 113 85.0
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 1.1e-51 208.4 200 56.0
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.1e-51 206.5 211 54.0
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.2e-50 204.9 108 84.3
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.6e-50 204.5 200 55.0
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 3.5e-50 203.4 200 54.5
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 4.6e-50 203.0 199 54.8
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 7.8e-50 202.2 205 52.7
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 2.3e-49 200.7 199 53.3
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 3.9e-49 199.9 200 54.5
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 5.1e-49 199.5 200 54.0
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 2.5e-48 197.2 199 52.3
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 6.8e-46 189.1 101 81.2
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 4.4e-45 186.4 199 51.8
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 4.4e-45 186.4 199 51.8
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.2e-44 184.1 201 50.7
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 1.9e-43 181.0 202 50.5
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 4.1e-43 179.9 200 48.0
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 5.6e-40 169.5 191 47.6
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.6e-29 134.0 97 69.1
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 9.9e-29 132.1 273 32.2
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 3.3e-24 117.1 163 39.9
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 7.3e-24 115.9 88 65.9
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 2.8e-23 114.0 67 77.6
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 2.6e-21 107.5 58 84.5
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.7e-20 104.8 74 67.6
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.9e-19 101.3 66 72.7
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 7.4e-16 89.4 46 87.0
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 3.1e-14 84.0 47 78.7
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.9e-11 74.7 40 82.5
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 9.3e-11 72.4 34 91.2
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 6.7e-09 66.2 56 60.7


User provided reference genes

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