Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 0.0e+00 1143.6 597 100.0
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 7.5e-123 445.3 469 54.6
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 9.8e-123 444.9 471 55.6
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.9e-121 440.7 471 53.9
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 5.6e-118 429.1 469 53.9
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 5.6e-118 429.1 467 52.0
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 1.6e-117 427.6 459 53.2
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.8e-116 424.1 472 52.8
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 6.8e-116 422.2 461 52.3
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.2e-115 421.4 457 51.4
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 3.4e-115 419.9 463 52.1
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 1.4e-113 414.5 470 51.9
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.4e-113 414.5 475 50.1
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.2e-112 411.4 476 49.2
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 3.5e-112 409.8 467 50.7
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.3e-111 407.9 471 49.3
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.9e-110 404.1 482 48.5
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 4.3e-110 402.9 471 48.8
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.6e-107 393.7 487 47.6
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.4e-105 387.1 453 49.7
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 3.5e-104 383.3 475 48.4
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 6.0e-104 382.5 452 49.6
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 1.7e-103 380.9 456 49.1
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 7.3e-102 375.6 456 50.9
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 1.6e-101 374.4 455 47.9
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.8e-101 373.6 481 47.2
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 6.2e-101 372.5 478 47.1
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 8.1e-101 372.1 453 47.9
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 1.4e-100 371.3 462 46.3
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 2.4e-100 370.5 457 47.9
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 4.0e-100 369.8 456 47.8
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 5.2e-100 369.4 460 48.3
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 7.6e-99 365.5 454 50.0
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 3.8e-98 363.2 454 46.9
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 8.4e-98 362.1 481 47.2
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 8.4e-98 362.1 454 48.5
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 3.2e-97 360.1 465 46.0
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 4.2e-97 359.8 469 46.7
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.2e-96 358.2 475 45.9
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 2.3e-95 354.0 467 46.9
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 3.9e-95 353.2 451 46.8
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.9e-94 350.9 457 46.4
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 5.6e-94 349.4 460 45.0
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.2e-93 348.2 464 46.3
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 3.6e-93 346.7 499 44.5
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 3.6e-93 346.7 457 45.3
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 6.2e-93 345.9 469 43.1
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 6.2e-93 345.9 469 43.1
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 6.9e-92 342.4 447 45.2
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 1.2e-91 341.7 451 42.4
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 1.5e-91 341.3 457 43.3
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 7.6e-91 339.0 466 42.5
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 7.6e-91 339.0 465 44.3
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.3e-90 338.2 460 43.3
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 1.7e-90 337.8 454 43.2
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 3.8e-90 336.7 358 53.4
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 7.1e-89 332.4 499 41.9
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 2.1e-88 330.9 493 41.4
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 7.8e-88 328.9 485 42.9
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 3.0e-87 327.0 426 45.5
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 8.7e-87 325.5 457 42.5
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.5e-86 324.7 486 40.7
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 5.6e-86 322.8 381 47.8
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 8.1e-85 318.9 478 42.3
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.4e-84 318.2 459 42.0
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 2.4e-84 317.4 394 49.0
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 9.0e-84 315.5 367 48.5
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.5e-83 314.7 493 42.4
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 1.5e-83 314.7 482 40.0
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.0e-83 314.3 496 39.5
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.4e-81 308.1 465 41.1
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 3.2e-81 307.0 457 40.9
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 9.3e-81 305.4 465 40.9
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.1e-80 304.3 457 40.3
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 6.0e-80 302.8 453 42.8
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 8.7e-79 298.9 479 40.7
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 4.3e-78 296.6 481 42.0
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.8e-77 293.9 409 42.8
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 3.7e-77 293.5 493 38.9
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 4.0e-76 290.0 407 42.5
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 5.8e-75 286.2 195 77.9
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.3e-74 285.0 426 41.3
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.8e-71 274.6 372 43.8
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.8e-71 274.6 372 43.8
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 8.2e-69 265.8 472 37.5
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 1.4e-68 265.0 388 43.6
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 5.3e-68 263.1 464 36.6
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 5.5e-65 253.1 463 38.4
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 7.4e-62 242.7 368 42.4
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.8e-60 238.0 176 76.1
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 7.7e-59 232.6 450 35.1
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 1.1e-54 218.8 459 35.3
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.6e-51 207.6 469 31.8
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 8.5e-50 202.6 470 31.9
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 7.0e-44 183.0 196 50.0
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.5e-43 180.6 161 60.9
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.0e-42 179.1 177 57.6
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.3e-42 178.7 499 32.5
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.9e-41 174.9 467 31.5
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 2.3e-39 167.9 354 35.9
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 5.2e-39 166.8 184 51.1
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 7.0e-36 156.4 163 51.5
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 2.7e-27 127.9 159 54.7
Potri.018G104400 Populus trichocarpa HOM05D026308 ORTHO05D030085 1.6e-24 118.6 102 65.7
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 5.7e-22 110.2 157 40.8
Potri.006G182400 Populus trichocarpa HOM05D026308 ORTHO05D030085 5.7e-22 110.2 110 60.9
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 2.2e-21 108.2 155 41.9
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 9.1e-20 102.8 111 52.3
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 7.2e-17 93.2 113 46.9
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 7.2e-17 93.2 113 46.9
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 2.1e-08 65.1 150 30.7
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 3.1e-07 61.2 130 39.2
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 1.2e-06 59.3 46 60.9


User provided reference genes

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