Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0137500 Salix brachista HOM05D037217 ORTHO05D008827 2.2e-239 832.0 460 100.0
Potri.006G180600 Populus trichocarpa HOM05D037217 ORTHO05D008827 5.4e-145 518.5 479 64.1
Sabra18G0088400 Salix brachista HOM05D037217 ORTHO05D008827 8.4e-106 388.3 547 48.3
TWI32G0905 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 3.9e-18 97.1 77 61.0
Actinidia38661 Actinidia chinensis HOM05D008438 ORTHO05D008827 1.4e-15 88.6 179 30.7
Cfa020785 Carpinus fangiana HOM05D019529 ORTHO05D008827 2.4e-12 77.8 67 55.2
QL02p094184 Quercus lobata HOM05D019529 ORTHO05D008827 3.2e-12 77.4 133 36.8
Rhsim12G0185500 Rhododendron simsii HOM05D017379 ORTHO05D008827 3.2e-12 77.4 77 48.1
AUR62025372 Chenopodium quinoa HOM05D030418 ORTHO05D008827 4.1e-12 77.0 189 33.9
TWI34G1835 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 7.1e-12 76.3 412 34.5
HanXRQChr04g0100031 Helianthus annuus HOM05D008438 ORTHO05D008827 1.2e-11 75.5 63 52.4
Cc04_g05290 Coffea canephora HOM05D008438 ORTHO05D008827 1.6e-11 75.1 63 54.0
Rhsim03G0259300 Rhododendron simsii HOM05D008438 ORTHO05D008827 1.6e-11 75.1 99 40.4
Thecc.09G153900 Theobroma cacao HOM05D019525 ORTHO05D008827 1.6e-11 75.1 91 41.8
COL.COLO4_26771 Corchorus olitorius HOM05D032892 ORTHO05D008827 2.7e-11 74.3 85 42.4
Dinv42819 Davidia involucrata HOM05D019090 ORTHO05D008827 2.7e-11 74.3 184 31.5
Dinv43281 Davidia involucrata HOM05D019090 ORTHO05D008827 2.7e-11 74.3 184 31.5
MSTRG.22807 Avicennia marina HOM05D008438 ORTHO05D008827 3.5e-11 73.9 77 48.1
AUR62032995 Chenopodium quinoa HOM05D032589 ORTHO05D008827 3.5e-11 73.9 77 49.4
Actinidia08936 Actinidia chinensis HOM05D017379 ORTHO05D008827 4.6e-11 73.6 126 34.9
Duzib168G1121 Durio zibethinus HOM05D019525 ORTHO05D008827 4.6e-11 73.6 107 41.1
Nitab4.5_0001036g0130 Nicotiana tabacum HOM05D022295 ORTHO05D008827 4.6e-11 73.6 130 35.4
Nitab4.5_0006744g0030 Nicotiana tabacum HOM05D022295 ORTHO05D008827 6.0e-11 73.2 133 35.3
RcHm_v2.0_Chr2g0132351 Rosa chinensis HOM05D015689 ORTHO05D008827 6.0e-11 73.2 64 51.6
CANSAT56G0832 Cannabis sativa HOM05D008438 ORTHO05D008827 7.8e-11 72.8 67 44.8
MD17G1226300 Malus domestica HOM05D015689 ORTHO05D008827 7.8e-11 72.8 77 48.1
HanXRQChr02g0033611 Helianthus annuus HOM05D008438 ORTHO05D008827 1.0e-10 72.4 63 49.2
QL02p094192 Quercus lobata HOM05D019529 ORTHO05D008827 1.0e-10 72.4 214 28.5
unitig_52.g17481 Utricularia gibba HOM05D008438 ORTHO05D008827 1.0e-10 72.4 109 40.4
FvH4_6g28290 Fragaria vesca HOM05D015689 ORTHO05D008827 1.3e-10 72.0 84 42.9
FAN14G1731 Fragaria x ananassa HOM05D015689 ORTHO05D008827 1.3e-10 72.0 84 42.9
ECA247G0974 Erigeron canadensis HOM05D008438 ORTHO05D008827 1.7e-10 71.6 92 41.3
Eucgr.F03984 Eucalyptus grandis HOM05D008438 ORTHO05D008827 2.3e-10 71.2 73 45.2
FAN09G3978 Fragaria x ananassa HOM05D015689 ORTHO05D008827 2.3e-10 71.2 84 42.9
Glyma.13G371300 Glycine max HOM05D022716 ORTHO05D008827 2.3e-10 71.2 101 39.6
Hma1.2p1_1914F.1_g307390 Hydrangea macrophylla HOM05D008438 ORTHO05D008827 2.3e-10 71.2 63 50.8
Glyma.15G002400 Glycine max HOM05D022716 ORTHO05D008827 3.0e-10 70.9 69 47.8
SGA_v2.0_scaffold5G02798 Striga asiatica HOM05D008438 ORTHO05D008827 3.9e-10 70.5 104 41.3
Haze_19141 Corylus avellana HOM05D019529 ORTHO05D008827 5.1e-10 70.1 121 39.7
FAN02G3655 Fragaria x ananassa HOM05D015689 ORTHO05D008827 5.1e-10 70.1 84 42.9
Oeu004554.3 Olea europaea HOM05D008438 ORTHO05D008827 5.1e-10 70.1 77 44.2
Sc10g0008430 Simmondsia chinensis HOM05D008438 ORTHO05D008827 5.1e-10 70.1 132 37.9
Hund12562 Selenicereus undatus HOM05D008438 ORTHO05D008827 6.6e-10 69.7 126 37.3
VMungo1080G1089 Vigna mungo HOM05D022716 ORTHO05D008827 6.6e-10 69.7 65 50.8
Peaxi162Scf00563g00416 Petunia axillaris HOM05D022295 ORTHO05D008827 8.6e-10 69.3 144 34.7
TAR625G0030 Trochodendron aralioides HOM05D008438 ORTHO05D008827 8.6e-10 69.3 64 45.3
Prupe.3G103500 Prunus persica HOM05D015689 ORTHO05D008827 1.1e-09 68.9 78 42.3
Aqoxy7G03345 Aquilegia oxysepala HOM05D008438 ORTHO05D008827 2.5e-09 67.8 64 51.6
ClCG09G003500 Citrullus lanatus HOM05D008438 ORTHO05D008827 2.5e-09 67.8 131 36.6
Sopen07g002110 Solanum pennellii HOM05D022295 ORTHO05D008827 2.5e-09 67.8 123 33.3
MELO3C023487.2 Cucumis melo HOM05D008438 ORTHO05D008827 3.3e-09 67.4 89 42.7
HanXRQChr05g0131701 Helianthus annuus HOM05D019090 ORTHO05D008827 3.3e-09 67.4 90 36.7
Manes.11G069100 Manihot esculenta HOM05D008438 ORTHO05D008827 3.3e-09 67.4 97 41.2
SalBow7G4248 Salvia bowleyana HOM05D008438 ORTHO05D008827 3.3e-09 67.4 78 46.2
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 4.3e-09 67.0 63 49.2
Haze_16688 Corylus avellana HOM05D008438 ORTHO05D008827 5.6e-09 66.6 99 38.4
Nitab4.5_0004738g0100 Nicotiana tabacum HOM05D008438 ORTHO05D008827 5.6e-09 66.6 64 48.4
Duzib235G0641 Durio zibethinus HOM05D032892 ORTHO05D008827 7.3e-09 66.2 62 46.8
Gohir.D04G088150 Gossypium hirsutum HOM05D019525 ORTHO05D008827 9.5e-09 65.9 145 33.1
Gorai.012G098400 Gossypium raimondii HOM05D019525 ORTHO05D008827 9.5e-09 65.9 145 33.1
Sed0012806 Sechium edule HOM05D008438 ORTHO05D008827 9.5e-09 65.9 125 35.2
CsaV3_7G031700 Cucumis sativus L. HOM05D008438 ORTHO05D008827 1.2e-08 65.5 126 36.5
Lj3g0015243 Lotus japonicus HOM05D022716 ORTHO05D008827 1.2e-08 65.5 65 47.7
CAN.G1008.6 Capsicum annuum HOM05D008438 ORTHO05D008827 1.6e-08 65.1 82 40.2
Phvul.005G183500 Phaseolus vulgaris HOM05D022716 ORTHO05D008827 2.1e-08 64.7 116 37.9
Solyc07g005980.2 Solanum lycopersicum HOM05D022295 ORTHO05D008827 2.1e-08 64.7 123 32.5
GSVIVG01016106001 Vitis vinifera HOM05D008438 ORTHO05D008827 2.8e-08 64.3 70 45.7
Migut.I00674 Erythranthe guttata HOM05D008438 ORTHO05D008827 3.6e-08 63.9 64 45.3
Lsat_1_v5_gn_4_132640 Lactuca sativa HOM05D008438 ORTHO05D008827 4.7e-08 63.5 35 71.4
Peaxi162Scf00314g01044 Petunia axillaris HOM05D008438 ORTHO05D008827 4.7e-08 63.5 135 31.9
Ciclev10026162m.g Citrus clementina HOM05D008438 ORTHO05D008827 1.4e-07 62.0 63 42.9
Manes.04G100800 Manihot esculenta HOM05D008438 ORTHO05D008827 1.4e-07 62.0 64 46.9
Glyma.01G050400 Glycine max HOM05D001860 ORTHO05D004239 1.8e-07 61.6 73 37.0
EL10Ac8g18908 Beta vulgaris HOM05D030418 ORTHO05D008827 2.4e-07 61.2 165 32.7
EL10Ac8g19397 Beta vulgaris HOM05D032589 ORTHO05D008827 2.4e-07 61.2 63 47.6
AUR62028379 Chenopodium quinoa HOM05D030418 ORTHO05D008827 2.4e-07 61.2 201 28.4
ECA234G2252 Erigeron canadensis HOM05D019529 ORTHO05D008827 2.4e-07 61.2 186 25.8
Glyma.02G109200 Glycine max HOM05D001860 ORTHO05D004239 2.4e-07 61.2 73 37.0
TWI18G0426 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 3.1e-07 60.8 63 46.0
COL.COLO4_05403 Corchorus olitorius HOM05D019525 ORTHO05D008827 4.0e-07 60.5 190 28.4
PGSC0003DMG400011154 Solanum tuberosum HOM05D008438 ORTHO05D008827 4.0e-07 60.5 44 50.0
SGA_v2.0_scaffold37G14678 Striga asiatica HOM05D008438 ORTHO05D008827 4.0e-07 60.5 63 44.4
Gohir.A13G076600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 6.8e-07 59.7 67 43.3
Sabra01G0028800 Salix brachista HOM05D008438 ORTHO05D008827 6.8e-07 59.7 64 42.2
PGSC0003DMG400014154 Solanum tuberosum HOM05D008438 ORTHO05D008827 6.8e-07 59.7 85 34.1
Solyc03g117660.4 Solanum lycopersicum HOM05D008438 ORTHO05D008827 1.2e-06 58.9 85 35.3
Sopen03g036570 Solanum pennellii HOM05D008438 ORTHO05D008827 1.2e-06 58.9 85 35.3
Potri.001G042000 Populus trichocarpa HOM05D008438 ORTHO05D008827 2.0e-06 58.2 101 32.7
VMungo1215G3190 Vigna mungo HOM05D001860 ORTHO05D004239 2.6e-06 57.8 70 35.7
Ah.09g228680 Amaranthus hybridus HOM05D030418 ORTHO05D008827 5.8e-06 56.6 128 32.8
Cpa.g.sc199.19 Carica papaya HOM05D019090 ORTHO05D008827 7.6e-06 56.2 397 22.7
Psat1g023600 Pisum sativum HOM05D024284 ORTHO05D025022 9.9e-06 55.8 169 30.2


User provided reference genes

Program Settings