Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 3.7e-146 521.5 268 100.0
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 4.1e-129 464.9 268 89.9
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 9.0e-76 287.7 266 60.2
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 3.8e-74 282.3 269 59.1
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 1.9e-73 280.0 266 60.9
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 2.5e-73 279.6 264 58.7
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 2.5e-70 269.6 266 57.9
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 9.6e-70 267.7 244 61.9
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 3.1e-68 262.7 292 55.5
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 6.9e-68 261.5 265 57.0
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 1.2e-67 260.8 278 56.1
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 7.6e-67 258.1 266 56.4
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 7.6e-67 258.1 262 55.7
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 7.6e-67 258.1 254 59.4
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 1.7e-66 256.9 277 58.5
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 4.9e-66 255.4 269 55.4
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.1e-65 254.2 255 59.6
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.4e-65 253.8 230 63.5
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.4e-65 253.8 263 57.0
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 2.5e-65 253.1 257 56.8
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.2e-65 252.7 263 55.9
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 3.2e-65 252.7 262 56.5
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 4.2e-65 252.3 267 53.9
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 7.1e-65 251.5 273 54.6
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 3.5e-64 249.2 240 60.4
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 7.9e-64 248.1 268 53.4
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.3e-63 247.3 266 55.3
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.3e-63 247.3 231 61.0
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 3.0e-63 246.1 254 57.9
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 3.0e-63 246.1 266 56.0
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 5.1e-63 245.4 220 62.3
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 5.1e-63 245.4 266 54.1
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 6.7e-63 245.0 250 56.4
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 8.7e-63 244.6 274 54.4
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 4.3e-62 242.3 266 55.6
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 5.7e-62 241.9 262 55.0
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 7.4e-62 241.5 231 59.7
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 9.7e-62 241.1 231 60.2
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 2.2e-61 240.0 260 56.9
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 2.8e-61 239.6 231 59.3
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 3.7e-61 239.2 259 54.8
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.1e-60 237.7 282 52.1
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.4e-60 237.3 225 59.1
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.4e-60 237.3 277 51.6
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.8e-60 236.9 225 60.4
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.8e-60 236.9 233 58.8
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 4.5e-59 232.3 267 54.3
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 4.5e-59 232.3 250 55.2
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.3e-58 230.7 236 57.6
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 3.8e-58 229.2 232 55.6
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.1e-57 227.6 246 55.7
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 1.4e-57 227.3 268 51.9
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 7.2e-57 224.9 262 51.5
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 7.2e-57 224.9 265 51.7
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 7.2e-57 224.9 265 51.7
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.2e-56 224.2 216 57.9
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 1.6e-56 223.8 246 53.7
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 2.1e-56 223.4 250 53.2
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 2.7e-56 223.0 267 49.8
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 4.6e-56 222.2 262 51.1
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.6e-56 222.2 267 49.4
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 7.9e-56 221.5 270 50.7
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.0e-55 221.1 279 50.5
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.4e-55 220.7 217 57.6
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 5.1e-55 218.8 238 55.5
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 6.7e-55 218.4 267 48.7
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.1e-54 217.6 259 51.7
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 1.5e-54 217.2 245 53.5
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 2.5e-54 216.5 217 59.4
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 7.4e-54 214.9 264 49.6
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.7e-53 213.8 252 52.0
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 8.2e-53 211.5 246 53.7
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 5.3e-52 208.8 257 47.1
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 9.1e-52 208.0 247 51.8
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.5e-51 207.2 213 58.7
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 1.5e-51 207.2 242 49.6
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 5.9e-51 205.3 257 47.5
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 5.9e-51 205.3 232 52.2
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.7e-50 203.8 222 54.1
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 9.4e-49 198.0 312 44.9
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 1.6e-48 197.2 261 47.1
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 1.0e-47 194.5 216 53.7
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 4.4e-46 189.1 233 50.2
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 1.3e-45 187.6 217 53.9
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 6.3e-45 185.3 216 53.2
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 4.1e-44 182.6 212 54.7
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 2.0e-43 180.3 218 52.3
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 5.9e-43 178.7 269 44.6
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 4.2e-41 172.6 257 45.9
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 4.2e-41 172.6 215 50.2
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 7.2e-41 171.8 276 42.4
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 7.2e-41 171.8 276 42.4
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 7.2e-41 171.8 267 44.2
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 1.2e-40 171.0 211 48.8
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.6e-40 170.6 211 48.8
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 5.2e-39 165.6 246 47.2
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 5.2e-39 165.6 244 45.1
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 5.2e-39 165.6 207 50.2
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 5.2e-39 165.6 116 74.1
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 6.7e-39 165.2 244 45.9
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 6.7e-39 165.2 252 46.4
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 6.7e-39 165.2 265 43.0
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 6.7e-39 165.2 275 41.1
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 2.6e-38 163.3 265 41.9
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 3.3e-38 162.9 273 42.1
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 9.7e-38 161.4 209 48.3
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 2.2e-37 160.2 270 44.1
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 4.8e-37 159.1 209 47.8
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.1e-33 147.9 94 78.7
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 1.9e-33 147.1 168 51.8
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 9.4e-33 144.8 343 34.7
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 2.1e-32 143.7 182 50.0
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 3.6e-32 142.9 184 49.5
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 6.3e-29 132.1 98 68.4
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.3e-26 124.4 148 55.4
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 2.1e-24 117.1 85 71.8
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 1.5e-22 110.9 161 43.5
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 9.8e-22 108.2 85 65.9
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 8.3e-21 105.1 217 37.3
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 1.4e-20 104.4 162 43.8
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 4.1e-20 102.8 119 50.4
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 1.6e-19 100.9 175 39.4
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.3e-18 97.8 148 44.6
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 8.6e-18 95.1 84 58.3
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 1.2e-16 91.3 219 33.8
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 8.9e-15 85.1 62 71.0
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.2e-14 84.7 121 45.5
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 2.0e-14 84.0 48 87.5
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 9.8e-14 81.6 61 63.9
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 8.6e-10 68.6 66 51.5
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-09 66.2 117 38.5
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 6.8e-07 58.9 113 38.1


User provided reference genes

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