Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0126000 Salix brachista HOM05D001647 ORTHO05D001191 9.4e-87 323.6 171 100.0
Potri.013G083000 Populus trichocarpa HOM05D001647 ORTHO05D001191 2.4e-50 202.6 196 64.3
Sabra13G0071800 Salix brachista HOM05D001647 ORTHO05D001191 3.3e-47 192.2 111 92.8
Manes.17G115300 Manihot esculenta HOM05D001647 ORTHO05D001191 6.0e-33 144.8 110 74.5
FvH4_1g30180 Fragaria vesca HOM05D001647 ORTHO05D001191 5.1e-32 141.7 110 73.6
FAN19G1664 Fragaria x ananassa HOM05D001647 ORTHO05D001191 5.1e-32 141.7 110 73.6
Cpa.g.c39129 Carica papaya HOM05D001647 ORTHO05D001191 6.6e-32 141.4 115 73.9
FAN26G2350 Fragaria x ananassa HOM05D001647 ORTHO05D001191 2.5e-31 139.4 110 72.7
Rhsim11G0136100 Rhododendron simsii HOM05D001647 ORTHO05D001191 2.5e-31 139.4 110 71.8
COL.COLO4_32812 Corchorus olitorius HOM05D001647 ORTHO05D001191 3.3e-31 139.0 85 87.1
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 3.3e-31 139.0 103 77.7
FAN23G1587 Fragaria x ananassa HOM05D001647 ORTHO05D001191 4.3e-31 138.7 110 72.7
CiPaw.05G037300 Carya illinoinensis HOM05D001647 ORTHO05D001191 5.6e-31 138.3 111 71.2
Gohir.A13G066300 Gossypium hirsutum HOM05D001647 ORTHO05D001191 7.3e-31 137.9 84 88.1
RcHm_v2.0_Chr3g0491551 Rosa chinensis HOM05D001647 ORTHO05D001191 7.3e-31 137.9 110 72.7
Atru.BG.203.p Acer truncatum HOM05D001647 ORTHO05D001191 1.3e-30 137.1 117 68.4
CSS0041249 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D001191 1.6e-30 136.7 105 76.2
Eucgr.I02671 Eucalyptus grandis HOM05D001647 ORTHO05D001191 1.6e-30 136.7 111 73.0
Duzib132G0204 Durio zibethinus HOM05D001647 ORTHO05D001191 2.8e-30 136.0 113 69.9
MD10G1049100 Malus domestica HOM05D001647 ORTHO05D001191 2.8e-30 136.0 99 76.8
PGR142G1579 Punica granatum HOM05D001647 ORTHO05D001191 2.8e-30 136.0 113 69.9
QL11p020509 Quercus lobata HOM05D001647 ORTHO05D001191 2.8e-30 136.0 87 85.1
ClCG09G015320 Citrullus lanatus HOM05D001647 ORTHO05D001191 3.6e-30 135.6 115 72.2
Nn8g39866 Nelumbo nucifera HOM05D001647 ORTHO05D001191 4.8e-30 135.2 103 75.7
Dinv09042 Davidia involucrata HOM05D000793 ORTHO05D001191 6.2e-30 134.8 105 74.3
Gohir.D13G055200 Gossypium hirsutum HOM05D001647 ORTHO05D001191 6.2e-30 134.8 84 86.9
Gorai.013G062300 Gossypium raimondii HOM05D001647 ORTHO05D001191 6.2e-30 134.8 84 86.9
TAR622G0864 Trochodendron aralioides HOM05D001647 ORTHO05D001191 6.2e-30 134.8 90 83.3
Cc03_g14500 Coffea canephora HOM05D001647 ORTHO05D001191 8.1e-30 134.4 109 69.7
DCAR_021853 Daucus carota HOM05D001647 ORTHO05D001191 8.1e-30 134.4 111 65.8
VMungo1383G0270 Vigna mungo HOM05D001647 ORTHO05D001191 8.1e-30 134.4 112 68.8
Ciclev10002443m.g Citrus clementina HOM05D000793 ORTHO05D001191 1.1e-29 134.0 99 77.8
GSVIVG01037932001 Vitis vinifera HOM05D001647 ORTHO05D001191 1.1e-29 134.0 112 71.4
Haze_10656 Corylus avellana HOM05D001647 ORTHO05D001191 1.4e-29 133.7 111 68.5
THA.LOC104804621 Tarenaya hassleriana HOM05D001647 ORTHO05D001191 1.4e-29 133.7 112 70.5
Cfa005613 Carpinus fangiana HOM05D001647 ORTHO05D001191 1.8e-29 133.3 102 75.5
Lj4g0011979 Lotus japonicus HOM05D001647 ORTHO05D001191 1.8e-29 133.3 111 69.4
Nitab4.5_0003174g0020 Nicotiana tabacum HOM05D001647 ORTHO05D001191 1.8e-29 133.3 101 76.2
Nitab4.5_0003858g0030 Nicotiana tabacum HOM05D001647 ORTHO05D001191 1.8e-29 133.3 90 83.3
Glyma.05G236500 Glycine max HOM05D001647 ORTHO05D001191 2.4e-29 132.9 111 68.5
Nn3g17239 Nelumbo nucifera HOM05D001647 ORTHO05D001191 2.4e-29 132.9 103 74.8
Sed0024612 Sechium edule HOM05D000793 ORTHO05D001191 2.4e-29 132.9 106 71.7
CsaV3_7G006390 Cucumis sativus L. HOM05D001647 ORTHO05D001191 3.1e-29 132.5 113 73.5
Prupe.7G001900 Prunus persica HOM05D001647 ORTHO05D001191 3.1e-29 132.5 111 68.5
A08p07170 Brassica napus HOM05D001647 ORTHO05D001191 5.3e-29 131.7 111 66.7
BraA08t32729Z Brassica rapa HOM05D001647 ORTHO05D001191 5.3e-29 131.7 111 66.7
Hma1.2p1_0704F.1_g206740 Hydrangea macrophylla HOM05D001647 ORTHO05D001191 5.3e-29 131.7 95 80.0
Lj9A354G35 Lonicera japonica HOM05D001647 ORTHO05D001191 5.3e-29 131.7 111 68.5
TWI59G0229 Tripterygium wilfordii HOM05D001647 ORTHO05D001191 5.3e-29 131.7 115 67.0
PGSC0003DMG400012587 Solanum tuberosum HOM05D001647 ORTHO05D001191 6.9e-29 131.3 90 82.2
CARHR218470 Cardamine hirsuta HOM05D001647 ORTHO05D001191 9.0e-29 131.0 112 66.1
Ciclev10030211m.g Citrus clementina HOM05D001647 ORTHO05D001191 9.0e-29 131.0 109 69.7
Lalb_Chr16g0387771 Lupinus albus HOM05D001647 ORTHO05D001191 9.0e-29 131.0 112 67.9
MELO3C018653.2 Cucumis melo HOM05D001647 ORTHO05D001191 1.2e-28 130.6 111 72.1
CAN.G523.79 Capsicum annuum HOM05D001647 ORTHO05D001191 1.5e-28 130.2 90 80.0
Glyma.08G043700 Glycine max HOM05D001647 ORTHO05D001191 1.5e-28 130.2 111 68.5
Thecc.02G140600 Theobroma cacao HOM05D001647 ORTHO05D001191 1.5e-28 130.2 84 82.1
MSTRG.20299 Avicennia marina HOM05D001647 ORTHO05D001191 2.0e-28 129.8 111 65.8
Solyc01g105090.3 Solanum lycopersicum HOM05D001647 ORTHO05D001191 2.0e-28 129.8 90 81.1
Sopen01g047630 Solanum pennellii HOM05D001647 ORTHO05D001191 2.0e-28 129.8 90 81.1
BcaB04g17720 Brassica carinata HOM05D001647 ORTHO05D001191 2.6e-28 129.4 115 66.1
BcaC07g37402 Brassica carinata HOM05D002078 ORTHO05D001191 3.4e-28 129.0 112 66.1
BolC8t47723H Brassica oleracea HOM05D001647 ORTHO05D001191 3.4e-28 129.0 112 66.1
C08p08760 Brassica napus HOM05D001647 ORTHO05D001191 4.5e-28 128.6 112 66.1
AL9U11200 Arabidopsis lyrata HOM05D001647 ORTHO05D001191 5.8e-28 128.3 92 76.1
Peaxi162Scf00001g00221 Petunia axillaris HOM05D001647 ORTHO05D001191 5.8e-28 128.3 101 74.3
Phvul.008G012400 Phaseolus vulgaris HOM05D001647 ORTHO05D001191 7.6e-28 127.9 112 67.9
Psat7g009000 Pisum sativum HOM05D001647 ORTHO05D001191 7.6e-28 127.9 111 66.7
AT4G13070 Arabidopsis thaliana HOM05D001647 ORTHO05D001191 9.9e-28 127.5 92 75.0
MBI15_g42001_MAGBIO Magnolia biondii HOM05D001647 ORTHO05D001191 1.3e-27 127.1 94 77.7
Aa31LG10G910 Aethionema arabicum HOM05D001647 ORTHO05D001191 1.7e-27 126.7 92 75.0
Migut.B00618 Erythranthe guttata HOM05D001647 ORTHO05D001191 1.7e-27 126.7 111 64.9
Sp7g10330 Schrenkiella parvula HOM05D001647 ORTHO05D001191 1.7e-27 126.7 112 66.1
Carub.0007s2969 Capsella rubella HOM05D001647 ORTHO05D001191 2.2e-27 126.3 99 70.7
Oeu000238.1 Olea europaea HOM05D001647 ORTHO05D001191 2.2e-27 126.3 96 74.0
SalBow5G2767 Salvia bowleyana HOM05D001647 ORTHO05D001191 2.2e-27 126.3 106 70.8
SalBow5G4276 Salvia bowleyana HOM05D001647 ORTHO05D001191 2.2e-27 126.3 106 70.8
Ca_00794_v3 Cicer arietinum L. HOM05D001647 ORTHO05D001191 2.9e-27 125.9 112 65.2
Sc06g0002120 Simmondsia chinensis HOM05D001647 ORTHO05D001191 2.9e-27 125.9 84 82.1
TPR.G32700 Trifolium pratense HOM05D001647 ORTHO05D001191 2.9e-27 125.9 111 66.7
CiPaw.05G037000 Carya illinoinensis HOM05D001647 ORTHO05D001191 3.8e-27 125.6 96 74.0
Lsat_1_v5_gn_5_107120 Lactuca sativa HOM05D001647 ORTHO05D001191 6.4e-27 124.8 117 64.1
Aqoxy2G00647 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 1.4e-26 123.6 87 79.3
Aqoxy2G03522 Aquilegia oxysepala HOM05D000793 ORTHO05D001191 1.4e-26 123.6 93 75.3
SalBow7G2325 Salvia bowleyana HOM05D001647 ORTHO05D001191 1.4e-26 123.6 106 68.9
SGA_v2.0_scaffold28G11975 Striga asiatica HOM05D001647 ORTHO05D001191 1.4e-26 123.6 121 61.2
CDE03G0001 Ceratophyllum demersum HOM05D001647 ORTHO05D001191 1.9e-26 123.2 112 66.1
HPP92_018918 Vanilla planifolia HOM05D001647 ORTHO05D001191 3.2e-26 122.5 101 70.3
Zm00001eb425090 Zea mays HOM05D001647 ORTHO05D001191 4.2e-26 122.1 96 70.8
SalBow7G2333 Salvia bowleyana HOM05D001647 ORTHO05D001191 9.3e-26 120.9 106 67.9
AUR62003265 Chenopodium quinoa HOM05D001647 ORTHO05D001191 1.2e-25 120.6 95 72.6
CANSAT35G0730 Cannabis sativa HOM05D001647 ORTHO05D001191 2.1e-25 119.8 115 60.0
Gorai.007G247800 Gossypium raimondii HOM05D001647 ORTHO05D001191 2.1e-25 119.8 84 79.8
Os06g0304500 Oryza sativa ssp. japonica HOM05D001647 ORTHO05D001191 6.0e-25 118.2 104 67.3
EL10Ac6g14819 Beta vulgaris HOM05D001647 ORTHO05D001191 7.9e-25 117.9 105 66.7
HanXRQChr16g0514011 Helianthus annuus HOM05D001647 ORTHO05D001191 7.9e-25 117.9 111 64.9
Ah.09g232790 Amaranthus hybridus HOM05D001647 ORTHO05D001191 1.0e-24 117.5 84 76.2
Gohir.D11G235100 Gossypium hirsutum HOM05D001647 ORTHO05D001191 3.0e-24 115.9 83 79.5
AUR62027203 Chenopodium quinoa HOM05D001647 ORTHO05D001191 6.7e-24 114.8 98 68.4
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.1e-23 114.0 110 62.7
unitig_21.g20918 Utricularia gibba HOM05D000793 ORTHO05D001191 2.5e-23 112.8 100 62.0
Medtr4g120880 Medicago truncatula HOM05D001647 ORTHO05D001191 9.6e-23 110.9 111 60.4
arahy.Tifrunner.gnm1.ann1.1F59TD Arachis hypogaea HOM05D000793 ORTHO05D001191 8.1e-22 107.8 112 58.9
arahy.Tifrunner.gnm1.ann1.SQ2TZ3 Arachis hypogaea HOM05D000793 ORTHO05D001191 8.1e-22 107.8 112 58.9
VMungo1383G2159 Vigna mungo HOM05D001647 ORTHO05D001191 7.6e-20 101.3 82 70.7
Aqoxy102s003 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 1.9e-15 86.7 64 75.0
Hund16552 Selenicereus undatus HOM05D000793 ORTHO05D001191 7.4e-15 84.7 134 44.8
ATR0751G252 Amborella trichopoda HOM05D000793 ORTHO05D001191 5.0e-11 72.0 50 76.0
Thhalv10025736m.g Eutrema salsugineum HOM05D000793 ORTHO05D001191 1.0e-08 64.3 44 70.5
Cfa015176 Carpinus fangiana HOM05D001647 ORTHO05D001191 3.0e-08 62.8 130 39.2
Migut.D01562 Erythranthe guttata HOM05D001647 ORTHO05D001191 8.7e-08 61.2 66 48.5
CiPaw.02G054100 Carya illinoinensis HOM05D001647 ORTHO05D001191 1.1e-07 60.8 105 41.9
Lalb_Chr03g0026081 Lupinus albus HOM05D001647 ORTHO05D001191 1.1e-07 60.8 112 42.9
MELO3C009824.2 Cucumis melo HOM05D001647 ORTHO05D001191 2.5e-07 59.7 103 41.7
QL10p050116 Quercus lobata HOM05D001647 ORTHO05D001191 2.5e-07 59.7 103 42.7
ClCG10G015540 Citrullus lanatus HOM05D001647 ORTHO05D001191 3.3e-07 59.3 103 41.7
CARHR121430 Cardamine hirsuta HOM05D001647 ORTHO05D001191 4.3e-07 58.9 96 43.8
Aa31LG5G7750 Aethionema arabicum HOM05D001528 ORTHO05D002760 7.4e-07 58.2 180 33.9
CsaV3_3G040890 Cucumis sativus L. HOM05D001647 ORTHO05D001191 1.3e-06 57.4 133 37.6
unitig_61.g26346 Utricularia gibba HOM05D001647 ORTHO05D001191 1.3e-06 57.4 137 35.0
MBI08_g20601_MAGBIO Magnolia biondii HOM05D001647 ORTHO05D001191 1.6e-06 57.0 108 41.7
SalBow4G1893 Salvia bowleyana HOM05D001647 ORTHO05D001191 1.6e-06 57.0 102 43.1
Aqoxy6G01580 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 2.2e-06 56.6 66 47.0
Ciclev10020228m.g Citrus clementina HOM05D001647 ORTHO05D001191 2.2e-06 56.6 135 37.0
Peaxi162Scf00141g00924 Petunia axillaris HOM05D001647 ORTHO05D001191 2.2e-06 56.6 125 37.6
Lj3g0005963 Lotus japonicus HOM05D001647 ORTHO05D001191 2.8e-06 56.2 126 38.9
SHI49904 Sapria himalayana HOM05D000024 ORTHO05D000007 2.8e-06 56.2 59 59.3
Cpa.g.sc9.296 Carica papaya HOM05D001647 ORTHO05D001191 3.7e-06 55.8 112 40.2
Duzib212G0802 Durio zibethinus HOM05D001647 ORTHO05D001191 3.7e-06 55.8 134 37.3
unitig_37.g12021 Utricularia gibba HOM05D001647 ORTHO05D001191 3.7e-06 55.8 130 38.5
Zm00001eb140480 Zea mays HOM05D001647 ORTHO05D001191 3.7e-06 55.8 80 46.2
SalBow3G2773 Salvia bowleyana HOM05D001647 ORTHO05D001191 4.8e-06 55.5 104 42.3
MELO3C011391.2 Cucumis melo HOM05D000793 ORTHO05D001191 6.3e-06 55.1 102 39.2
DCAR_021358 Daucus carota HOM05D000467 ORTHO05D000379 6.3e-06 55.1 27 100.0
BcaC01g04968 Brassica carinata HOM05D001647 ORTHO05D001191 8.2e-06 54.7 96 40.6
BolC3t15505H Brassica oleracea HOM05D001647 ORTHO05D001191 8.2e-06 54.7 96 40.6
Prupe.1G196500 Prunus persica HOM05D001647 ORTHO05D001191 8.2e-06 54.7 104 39.4
PGR083G0602 Punica granatum HOM05D001647 ORTHO05D001191 8.2e-06 54.7 57 52.6
Solyc06g082990.4 Solanum lycopersicum HOM05D001647 ORTHO05D001191 8.2e-06 54.7 97 43.3
Sopen06g034380 Solanum pennellii HOM05D001647 ORTHO05D001191 8.2e-06 54.7 97 43.3


User provided reference genes

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