Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0124900 Salix brachista HOM05D000528 ORTHO05D048625 3.6e-58 228.0 114 100.0
Sabra18G0066200 Salix brachista HOM05D000528 ORTHO05D001569 1.8e-25 119.4 107 63.6
Potri.018G075300 Populus trichocarpa HOM05D000528 ORTHO05D001569 1.5e-24 116.3 106 64.2
MD02G1050300 Malus domestica HOM05D000528 ORTHO05D001569 4.2e-22 108.2 104 59.6
CSS0010183 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D001569 5.4e-22 107.8 104 59.6
CSS0031605 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D001569 5.4e-22 107.8 104 59.6
Actinidia32687 Actinidia chinensis HOM05D000528 ORTHO05D001569 1.2e-21 106.7 104 55.8
TWI34G1986 Tripterygium wilfordii HOM05D000528 ORTHO05D001569 2.1e-21 105.9 113 58.4
Dinv41589 Davidia involucrata HOM05D000528 ORTHO05D001569 2.7e-21 105.5 104 59.6
Rhsim03G0244100 Rhododendron simsii HOM05D000528 ORTHO05D001569 1.3e-20 103.2 104 55.8
Prupe.7G228800 Prunus persica HOM05D000528 ORTHO05D001569 1.7e-20 102.8 104 58.7
vmacro06203 Vaccinium macrocarpon HOM05D000528 ORTHO05D001569 1.7e-20 102.8 104 54.8
Thecc.09G112700 Theobroma cacao HOM05D000528 ORTHO05D001569 3.9e-20 101.7 104 58.7
Duzib150G0943 Durio zibethinus HOM05D000528 ORTHO05D001569 5.1e-20 101.3 104 58.7
Eucgr.C03862 Eucalyptus grandis HOM05D000528 ORTHO05D001569 5.1e-20 101.3 104 57.7
RcHm_v2.0_Chr2g0090781 Rosa chinensis HOM05D000528 ORTHO05D001569 6.6e-20 100.9 103 56.3
Atru.BG.16.p Acer truncatum HOM05D000528 ORTHO05D001569 1.1e-19 100.1 101 59.4
COL.COLO4_34896 Corchorus olitorius HOM05D000528 ORTHO05D001569 1.5e-19 99.8 104 56.7
MELO3C004551.2 Cucumis melo HOM05D000528 ORTHO05D001569 1.5e-19 99.8 104 56.7
CsaV3_2G002330 Cucumis sativus L. HOM05D000528 ORTHO05D001569 2.5e-19 99.0 104 56.7
ClCG11G002530 Citrullus lanatus HOM05D000528 ORTHO05D001569 4.3e-19 98.2 106 55.7
DCAR_028721 Daucus carota HOM05D000528 ORTHO05D001569 4.3e-19 98.2 103 57.3
CiPaw.03G233900 Carya illinoinensis HOM05D000528 ORTHO05D001569 5.6e-19 97.8 104 55.8
Haze_25700 Corylus avellana HOM05D000528 ORTHO05D001569 5.6e-19 97.8 104 51.9
Lj2g0020151 Lotus japonicus HOM05D000528 ORTHO05D001569 5.6e-19 97.8 105 55.2
Manes.03G019000 Manihot esculenta HOM05D000528 ORTHO05D001569 5.6e-19 97.8 102 54.9
Cfa003276 Carpinus fangiana HOM05D000528 ORTHO05D001569 1.3e-18 96.7 104 51.0
Lalb_Chr14g0371441 Lupinus albus HOM05D000528 ORTHO05D001569 1.6e-18 96.3 103 56.3
Nitab4.5_0000413g0170 Nicotiana tabacum HOM05D000528 ORTHO05D001569 1.6e-18 96.3 103 54.4
Lj7A647T56 Lonicera japonica HOM05D000528 ORTHO05D001569 2.1e-18 95.9 103 55.3
Ciclev10010624m.g Citrus clementina HOM05D000528 ORTHO05D001569 2.8e-18 95.5 101 55.4
EL10Ac8g18513 Beta vulgaris HOM05D000528 ORTHO05D001569 3.6e-18 95.1 102 52.9
Duzib168G2182 Durio zibethinus HOM05D000528 ORTHO05D001569 3.6e-18 95.1 104 58.7
QL03p049169 Quercus lobata HOM05D000528 ORTHO05D001569 3.6e-18 95.1 104 52.9
CANSAT21G0716 Cannabis sativa HOM05D000528 ORTHO05D000001 6.2e-18 94.4 101 53.5
FvH4_1g05140 Fragaria vesca HOM05D000528 ORTHO05D001569 1.4e-17 93.2 106 50.9
FAN19G0743 Fragaria x ananassa HOM05D000528 ORTHO05D001569 1.4e-17 93.2 106 50.9
Nitab4.5_0001572g0010 Nicotiana tabacum HOM05D000528 ORTHO05D001569 1.4e-17 93.2 103 53.4
Solyc03g070470.1 Solanum lycopersicum HOM05D000528 ORTHO05D001569 1.8e-17 92.8 103 53.4
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 1.8e-17 92.8 103 53.4
VMungo0464G1860 Vigna mungo HOM05D000528 ORTHO05D001569 1.8e-17 92.8 103 54.4
TPR.G30576 Trifolium pratense HOM05D000528 ORTHO05D001569 2.4e-17 92.4 104 52.9
Phvul.004G161900 Phaseolus vulgaris HOM05D000528 ORTHO05D001569 3.1e-17 92.0 103 54.4
Sed0002065 Sechium edule HOM05D000528 ORTHO05D001569 3.1e-17 92.0 104 51.0
PGSC0003DMG400007651 Solanum tuberosum HOM05D000528 ORTHO05D001569 4.0e-17 91.7 103 52.4
Cpa.g.sc23.116 Carica papaya HOM05D000528 ORTHO05D001569 5.3e-17 91.3 101 52.5
FAN26G0098 Fragaria x ananassa HOM05D000528 ORTHO05D001569 5.3e-17 91.3 106 51.9
FAN26G2632 Fragaria x ananassa HOM05D000528 ORTHO05D001569 5.3e-17 91.3 106 51.9
Gorai.009G023900 Gossypium raimondii HOM05D000528 ORTHO05D001569 5.3e-17 91.3 103 56.3
Gohir.D05G023800 Gossypium hirsutum HOM05D000528 ORTHO05D001569 6.9e-17 90.9 103 56.3
CAN.G184.57 Capsicum annuum HOM05D000528 ORTHO05D001569 9.0e-17 90.5 103 50.5
GSVIVG01015408001 Vitis vinifera HOM05D000528 ORTHO05D001569 9.0e-17 90.5 101 50.5
arahy.Tifrunner.gnm1.ann1.35ZMHK Arachis hypogaea HOM05D000528 ORTHO05D001569 1.5e-16 89.7 101 54.5
arahy.Tifrunner.gnm1.ann1.CV2QSX Arachis hypogaea HOM05D000528 ORTHO05D001569 1.5e-16 89.7 101 54.5
Ca_25521_v3 Cicer arietinum L. HOM05D000528 ORTHO05D001569 1.5e-16 89.7 105 51.4
Peaxi162Scf00560g00025 Petunia axillaris HOM05D000528 ORTHO05D001569 1.5e-16 89.7 99 53.5
Cc06_g09520 Coffea canephora HOM05D000528 ORTHO05D001569 2.0e-16 89.4 99 53.5
Psat1g040480 Pisum sativum HOM05D000528 ORTHO05D001569 2.0e-16 89.4 99 53.5
TAR362G0147 Trochodendron aralioides HOM05D000528 ORTHO05D001569 2.6e-16 89.0 103 51.5
Lsat_1_v5_gn_5_100720 Lactuca sativa HOM05D000528 ORTHO05D001569 4.5e-16 88.2 104 51.0
Sc18g0001130 Simmondsia chinensis HOM05D000528 ORTHO05D001569 4.5e-16 88.2 102 50.0
MD15G1187900 Malus domestica HOM05D000528 ORTHO05D048625 9.9e-16 87.0 98 56.1
ECA234G4174 Erigeron canadensis HOM05D000528 ORTHO05D001569 1.3e-15 86.7 103 51.5
SGA_v2.0_scaffold37G14653 Striga asiatica HOM05D000528 ORTHO05D001569 2.9e-15 85.5 96 55.2
Migut.I00641 Erythranthe guttata HOM05D000528 ORTHO05D001569 8.4e-15 84.0 108 49.1
SHI26919 Sapria himalayana HOM05D000528 ORTHO05D001569 1.4e-14 83.2 99 51.5
MBI01_g11792_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D001569 2.4e-14 82.4 103 48.5
AUR62021520 Chenopodium quinoa HOM05D000528 ORTHO05D001569 3.2e-14 82.0 107 51.4
HanXRQChr12g0355451 Helianthus annuus HOM05D000528 ORTHO05D001569 3.2e-14 82.0 98 51.0
THA.LOC104799071 Tarenaya hassleriana HOM05D000528 ORTHO05D001569 3.2e-14 82.0 107 41.1
Aqoxy7G03760 Aquilegia oxysepala HOM05D000528 ORTHO05D001569 1.2e-13 80.1 101 48.5
Thhalv10012445m.g Eutrema salsugineum HOM05D000528 ORTHO05D001569 2.1e-13 79.3 112 43.8
PSO017G0622 Papaver somniferum HOM05D000528 ORTHO05D001569 2.7e-13 79.0 99 48.5
PSO675G2635 Papaver somniferum HOM05D000528 ORTHO05D001569 2.7e-13 79.0 99 48.5
Nn1g00121 Nelumbo nucifera HOM05D000528 ORTHO05D001569 3.5e-13 78.6 103 45.6
Sp6g24780 Schrenkiella parvula HOM05D000528 ORTHO05D001569 6.0e-13 77.8 112 42.0
CARHR064710 Cardamine hirsuta HOM05D000528 ORTHO05D001569 1.0e-12 77.0 112 43.8
Glyma.09G189000 Glycine max HOM05D000528 ORTHO05D001569 3.9e-12 75.1 93 49.5
AL6G31120 Arabidopsis lyrata HOM05D000528 ORTHO05D001569 8.7e-12 73.9 112 42.9
Aa31LG1G8700 Aethionema arabicum HOM05D000528 ORTHO05D001569 1.1e-11 73.6 111 40.5
A10p20100 Brassica napus HOM05D000528 ORTHO05D001569 1.1e-11 73.6 112 41.1
BolC9t58522H Brassica oleracea HOM05D000528 ORTHO05D001569 1.1e-11 73.6 112 41.1
BraA10t44084Z Brassica rapa HOM05D000528 ORTHO05D001569 1.1e-11 73.6 112 41.1
Zm00001eb138130 Zea mays HOM05D000528 ORTHO05D001569 1.1e-11 73.6 104 42.3
AT5G19610 Arabidopsis thaliana HOM05D000528 ORTHO05D001569 1.5e-11 73.2 101 45.5
Carub.0006s1796 Capsella rubella HOM05D000528 ORTHO05D001569 1.9e-11 72.8 112 42.0
SalBow7G0484 Salvia bowleyana HOM05D000528 ORTHO05D001569 1.9e-11 72.8 91 48.4
C09p56570 Brassica napus HOM05D000528 ORTHO05D001569 3.3e-11 72.0 111 40.5
CDE05G2741 Ceratophyllum demersum HOM05D000528 ORTHO05D001569 5.6e-11 71.2 103 38.8
Medtr6g086260 Medicago truncatula HOM05D000528 ORTHO05D001569 1.3e-10 70.1 63 58.7
unitig_0.g1091 Utricularia gibba HOM05D000528 ORTHO05D001569 1.6e-10 69.7 106 44.3
HPP92_002719 Vanilla planifolia HOM05D000528 ORTHO05D001569 2.8e-10 68.9 101 45.5
Os04g0117300 Oryza sativa ssp. japonica HOM05D000528 ORTHO05D001569 3.6e-10 68.6 104 45.2
PGR102G3236 Punica granatum HOM05D000528 ORTHO05D001569 1.8e-09 66.2 106 41.5
Aqoxy5G01765 Aquilegia oxysepala HOM05D000528 ORTHO05D001569 6.9e-09 64.3 63 55.6


User provided reference genes

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