Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 6.3e-285 983.4 489 100.0
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 3.4e-198 695.3 388 91.2
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.1e-177 627.1 390 82.3
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 6.5e-173 611.3 389 80.5
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 5.7e-153 545.0 347 76.7
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 3.7e-152 542.3 419 67.5
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 4.5e-150 535.4 418 67.0
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 1.0e-149 534.3 346 74.3
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 1.7e-149 533.5 376 71.8
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 3.8e-149 532.3 317 81.7
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 5.0e-149 531.9 315 81.0
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 1.5e-148 530.4 332 78.0
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 3.2e-148 529.3 340 76.8
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 5.5e-148 528.5 351 74.4
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 1.6e-147 526.9 353 73.1
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 2.1e-147 526.6 361 73.4
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 3.6e-147 525.8 371 70.6
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 6.1e-147 525.0 367 71.4
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 2.3e-146 523.1 321 77.6
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 1.2e-145 520.8 321 77.6
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.0e-145 520.0 362 71.8
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 2.6e-145 519.6 318 78.3
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 3.4e-145 519.2 349 73.9
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 5.7e-145 518.5 377 71.6
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 7.5e-145 518.1 344 73.5
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 7.5e-145 518.1 319 78.1
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 1.3e-144 517.3 381 68.8
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 1.3e-144 517.3 352 72.4
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 1.3e-144 517.3 343 74.1
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 3.7e-144 515.8 318 77.4
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 8.3e-144 514.6 348 72.1
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 1.4e-143 513.8 316 78.2
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 1.8e-143 513.5 349 72.8
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 3.1e-143 512.7 425 64.0
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 4.1e-143 512.3 330 75.2
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 4.1e-143 512.3 394 67.3
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 9.1e-143 511.1 327 75.2
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.2e-142 510.8 348 73.6
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 2.0e-142 510.0 316 77.8
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 2.7e-142 509.6 369 69.6
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 1.3e-141 507.3 358 71.5
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.7e-141 506.9 347 72.3
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 2.2e-141 506.5 315 76.2
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 2.9e-141 506.1 416 64.4
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 6.5e-141 505.0 341 73.6
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 6.5e-141 505.0 422 64.0
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 8.5e-141 504.6 315 77.5
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 8.5e-141 504.6 317 77.3
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.5e-140 503.8 350 71.4
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.9e-140 503.4 378 68.5
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 2.5e-140 503.1 357 71.1
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 3.2e-140 502.7 318 75.8
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 3.2e-140 502.7 318 75.2
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 3.2e-140 502.7 334 73.7
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 3.2e-140 502.7 316 76.6
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 4.2e-140 502.3 327 75.2
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 5.5e-140 501.9 401 65.6
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 9.4e-140 501.1 339 72.6
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 1.6e-139 500.4 351 70.4
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 2.1e-139 500.0 402 64.4
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 3.6e-139 499.2 368 70.1
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 3.6e-139 499.2 338 73.4
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 4.7e-139 498.8 402 64.2
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 6.1e-139 498.4 397 64.7
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 2.3e-138 496.5 400 63.5
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 6.8e-138 495.0 312 73.4
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 6.8e-138 495.0 318 74.5
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 6.8e-138 495.0 364 69.0
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 8.8e-138 494.6 318 74.5
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 1.2e-137 494.2 402 63.9
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 1.5e-137 493.8 317 75.1
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 1.5e-137 493.8 333 71.5
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.5e-137 493.8 351 69.5
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 2.0e-137 493.4 317 74.4
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 2.0e-137 493.4 320 74.7
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 2.6e-137 493.0 353 69.1
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 5.7e-137 491.9 373 67.0
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 5.7e-137 491.9 373 67.0
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 7.5e-137 491.5 317 74.4
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 7.5e-137 491.5 370 67.6
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 7.5e-137 491.5 317 74.4
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 7.5e-137 491.5 370 67.6
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 7.5e-137 491.5 317 74.4
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 7.5e-137 491.5 316 75.0
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 9.8e-137 491.1 358 68.2
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 9.8e-137 491.1 317 74.4
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 9.8e-137 491.1 317 74.4
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 9.8e-137 491.1 332 71.7
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.7e-136 490.3 363 68.9
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 2.2e-136 490.0 318 73.9
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 3.7e-136 489.2 423 61.2
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 4.9e-136 488.8 363 69.1
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.1e-135 487.6 345 69.3
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 1.1e-135 487.6 418 59.1
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 1.8e-135 486.9 329 72.3
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 2.4e-135 486.5 349 70.8
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 3.1e-135 486.1 391 65.0
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.1e-135 486.1 411 63.5
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 9.2e-135 484.6 347 70.6
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 1.2e-134 484.2 365 66.8
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.0e-134 483.4 411 63.3
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 4.5e-134 482.3 345 67.5
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 4.5e-134 482.3 338 68.9
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 5.9e-134 481.9 363 67.2
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.3e-133 480.7 411 61.8
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.9e-133 479.6 421 62.0
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 3.8e-133 479.2 348 67.5
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 8.6e-133 478.0 350 68.9
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 2.5e-132 476.5 348 67.2
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 3.3e-132 476.1 348 67.2
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 3.3e-132 476.1 375 66.1
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 5.6e-132 475.3 406 63.8
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 7.3e-132 474.9 377 65.3
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.7e-131 472.2 412 62.1
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.8e-130 470.3 313 72.8
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.5e-129 467.2 388 60.8
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 4.1e-127 459.1 313 69.6
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 4.6e-126 455.7 322 70.2
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 7.8e-126 454.9 330 70.6
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 2.8e-123 446.4 362 63.3
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 4.7e-123 445.7 341 64.8
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.4e-122 444.1 316 67.7
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 1.4e-122 444.1 370 63.0
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 2.3e-122 443.4 314 67.2
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 3.1e-122 443.0 314 66.6
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 4.0e-122 442.6 395 59.0
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 9.8e-121 438.0 354 65.8
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.6e-118 430.6 337 62.3
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 2.0e-118 430.3 381 61.4
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 6.0e-118 428.7 367 57.2
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 7.8e-118 428.3 317 68.1
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 3.0e-117 426.4 356 61.2
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 1.1e-116 424.5 361 60.1
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 3.3e-116 422.9 347 63.7
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 3.6e-115 419.5 349 59.9
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 8.1e-115 418.3 363 58.4
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.5e-113 414.1 280 73.6
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 1.7e-112 410.6 364 57.7
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 3.7e-112 409.5 382 58.6
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 8.3e-112 408.3 335 63.9
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 1.9e-111 407.1 263 72.2
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 3.2e-111 406.4 311 64.3
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 1.2e-105 387.9 322 60.2
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 3.4e-105 386.3 263 70.7
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 5.8e-105 385.6 322 59.9
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 8.6e-101 371.7 432 50.9
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.3e-93 347.8 346 56.1
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 1.5e-84 317.8 422 47.6
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 7.4e-84 315.5 190 78.9
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.3e-75 288.1 280 58.6
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 6.5e-72 275.8 237 62.9
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 4.6e-70 269.6 257 60.3
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 6.9e-66 255.8 246 59.8
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 9.3e-63 245.4 156 76.3
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 5.9e-57 226.1 332 41.0
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 1.3e-51 208.4 129 79.1
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 4.4e-36 156.8 304 34.5
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 3.6e-30 137.1 391 29.9
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 8.8e-21 105.9 59 72.9
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 6.3e-19 99.8 49 89.8
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 2.7e-17 94.4 87 52.9
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 6.1e-14 83.2 125 44.8
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 4.0e-13 80.5 38 86.8
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 4.1e-10 70.5 136 33.1
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 5.4e-10 70.1 63 49.2
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 7.8e-09 66.2 51 62.7
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 6.6e-08 63.2 208 24.5
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 6.6e-08 63.2 49 63.3
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.5e-07 62.0 127 37.8


User provided reference genes

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