Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 3.5e-109 398.3 198 100.0
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.5e-48 196.8 206 57.8
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 9.7e-35 151.0 209 45.5
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.8e-34 148.7 206 44.7
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 6.3e-34 148.3 208 46.2
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.2e-32 144.1 188 47.9
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.6e-32 142.9 205 44.9
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.5e-32 142.5 202 43.1
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.7e-31 140.2 202 42.6
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 5.0e-31 138.7 195 46.7
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 7.2e-30 134.8 209 42.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.2e-29 134.0 207 43.5
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 4.7e-29 132.1 195 44.1
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 8.0e-29 131.3 210 41.9
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.0e-28 131.0 209 40.7
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 1.0e-28 131.0 207 40.6
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.4e-28 130.6 209 41.6
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.5e-27 127.1 208 38.9
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.5e-27 127.1 204 42.2
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-27 127.1 200 40.5
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-27 127.1 200 41.0
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.7e-27 125.2 194 44.3
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 7.5e-27 124.8 193 39.9
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.2e-26 123.2 201 40.8
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.2e-26 123.2 203 41.9
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.7e-26 122.5 203 43.3
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.7e-26 122.5 203 41.9
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.2e-26 121.3 200 38.0
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.4e-25 120.6 194 44.8
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.8e-25 120.2 188 39.4
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 1.8e-25 120.2 196 37.2
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 2.4e-25 119.8 193 39.4
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.4e-25 119.8 194 44.3
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 2.4e-25 119.8 196 41.3
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 4.1e-25 119.0 199 37.7
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 5.3e-25 118.6 194 39.2
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 5.3e-25 118.6 201 37.8
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 7.0e-25 118.2 205 37.1
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 7.0e-25 118.2 201 37.8
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 9.1e-25 117.9 188 39.9
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 9.1e-25 117.9 196 37.2
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.2e-24 117.5 214 36.4
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 1.2e-24 117.5 200 37.5
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.6e-24 117.1 195 37.9
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.6e-24 117.1 200 37.5
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.6e-24 117.1 199 37.2
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.6e-24 117.1 199 37.2
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.6e-24 117.1 201 41.3
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 2.0e-24 116.7 194 38.7
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 2.0e-24 116.7 202 39.1
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 2.7e-24 116.3 199 39.7
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 2.7e-24 116.3 195 40.0
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 3.5e-24 115.9 207 37.2
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 4.5e-24 115.5 199 39.7
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 5.9e-24 115.2 201 40.8
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 7.7e-24 114.8 199 39.2
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 7.7e-24 114.8 199 39.2
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.0e-23 114.4 194 37.6
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 1.0e-23 114.4 206 39.3
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 1.0e-23 114.4 191 38.7
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 2.9e-23 112.8 192 38.5
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 8.5e-23 111.3 198 34.8
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 8.5e-23 111.3 198 34.8
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.1e-22 110.9 187 40.1
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.5e-22 110.5 187 36.4
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 2.5e-22 109.8 198 38.4
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 2.5e-22 109.8 198 38.4
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 3.2e-22 109.4 203 38.4
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 4.2e-22 109.0 200 39.5
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 4.2e-22 109.0 213 35.7
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 4.2e-22 109.0 195 39.0
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 4.2e-22 109.0 207 38.2
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 4.2e-22 109.0 210 34.3
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 7.2e-22 108.2 199 39.2
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.6e-21 107.1 197 37.1
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 2.1e-21 106.7 188 38.8
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.1e-21 106.7 202 36.6
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 2.7e-21 106.3 199 36.7
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 2.7e-21 106.3 198 35.4
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 4.7e-21 105.5 206 37.4
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 6.1e-21 105.1 192 34.4
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 6.1e-21 105.1 221 36.7
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 8.0e-21 104.8 202 36.6
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.4e-20 104.0 196 39.3
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.4e-20 104.0 235 34.5
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.3e-20 103.2 218 33.5
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.2e-19 100.9 198 36.9
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 1.5e-19 100.5 221 33.9
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.0e-19 100.1 201 37.3
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 2.6e-19 99.8 201 36.3
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 3.4e-19 99.4 185 40.5
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 7.5e-19 98.2 205 34.6
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 7.5e-19 98.2 204 34.3
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 9.8e-19 97.8 222 31.5
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 1.7e-18 97.1 212 33.0
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 2.2e-18 96.7 207 32.4
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 4.8e-18 95.5 194 38.7
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 6.3e-18 95.1 223 31.4
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 8.3e-18 94.7 192 33.9
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.1e-17 94.4 200 36.0
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.4e-17 94.0 203 34.5
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 2.4e-17 93.2 193 35.8
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.2e-16 90.9 192 34.4
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.6e-16 90.5 188 32.4
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.6e-16 90.5 185 38.9
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 5.9e-16 88.6 197 35.5
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.3e-15 87.4 204 28.4
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 2.9e-15 86.3 169 37.3
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 2.9e-15 86.3 195 34.4
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 2.5e-14 83.2 186 38.7
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 2.5e-14 83.2 203 34.0
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 1.2e-13 80.9 203 33.0
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 2.7e-13 79.7 95 46.3
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 4.7e-13 79.0 194 35.6
MBI19_g18108_MAGBIO Magnolia biondii HOM05D005897 ORTHO05D007128 6.1e-13 78.6 224 29.9
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 2.3e-12 76.6 203 31.5
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 3.4e-11 72.8 201 28.4
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 3.4e-11 72.8 204 31.4
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.4e-11 72.4 197 31.0
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 1.3e-10 70.9 194 34.0
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 1.7e-10 70.5 195 29.7
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 2.4e-09 66.6 196 31.6
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 3.1e-09 66.2 202 32.2
DCAR_011924 Daucus carota HOM05D005897 ORTHO05D007128 1.0e-07 61.2 169 29.6
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.3e-07 60.1 135 35.6
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 2.9e-07 59.7 218 29.4
Os09g0438100 Oryza sativa ssp. japonica HOM05D041184 ORTHO05D037194 1.5e-06 57.4 232 28.0
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 2.5e-06 56.6 43 58.1
Zm00001eb313970 Zea mays HOM05D041184 ORTHO05D037194 2.5e-06 56.6 197 30.5


User provided reference genes

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