Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 1.2e-91 339.7 163 100.0
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 4.4e-33 145.2 163 53.4
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 6.8e-18 94.7 154 39.6
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 2.9e-16 89.4 154 37.7
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 1.4e-15 87.0 46 87.0
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 4.1e-15 85.5 46 82.6
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 5.4e-15 85.1 46 84.8
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 5.4e-15 85.1 169 37.9
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 9.2e-15 84.3 46 87.0
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 2.0e-14 83.2 46 82.6
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 7.8e-14 81.3 46 80.4
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 7.8e-14 81.3 46 78.3
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 1.0e-13 80.9 48 77.1
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 2.3e-13 79.7 46 76.1
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 3.9e-13 79.0 43 81.4
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 3.9e-13 79.0 43 81.4
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 3.9e-13 79.0 46 73.9
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 3.9e-13 79.0 46 78.3
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 3.9e-13 79.0 43 81.4
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 5.0e-13 78.6 46 76.1
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 6.6e-13 78.2 43 79.1
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 6.6e-13 78.2 172 36.0
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 6.6e-13 78.2 43 79.1
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 1.1e-12 77.4 43 79.1
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 1.1e-12 77.4 46 78.3
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 1.1e-12 77.4 46 73.9
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 1.5e-12 77.0 45 75.6
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 1.5e-12 77.0 46 76.1
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 1.5e-12 77.0 170 34.1
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 1.5e-12 77.0 46 71.7
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 1.5e-12 77.0 46 71.7
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 1.5e-12 77.0 43 79.1
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 1.9e-12 76.6 46 76.1
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 1.9e-12 76.6 46 76.1
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 1.9e-12 76.6 46 73.9
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.9e-12 76.6 44 77.3
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.5e-12 76.3 46 73.9
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 3.3e-12 75.9 46 78.3
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 4.3e-12 75.5 55 65.5
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 4.3e-12 75.5 46 76.1
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 5.6e-12 75.1 43 76.7
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 5.6e-12 75.1 46 71.7
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 5.6e-12 75.1 46 71.7
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 5.6e-12 75.1 46 71.7
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 5.6e-12 75.1 46 71.7
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 5.6e-12 75.1 46 71.7
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 7.3e-12 74.7 46 76.1
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 7.3e-12 74.7 43 76.7
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 9.5e-12 74.3 46 73.9
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 9.5e-12 74.3 46 73.9
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 1.2e-11 73.9 166 33.7
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 1.2e-11 73.9 48 70.8
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 1.2e-11 73.9 65 55.4
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 1.6e-11 73.6 43 74.4
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 1.6e-11 73.6 43 74.4
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 1.6e-11 73.6 43 74.4
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 1.6e-11 73.6 43 74.4
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 1.6e-11 73.6 45 77.8
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 1.6e-11 73.6 44 75.0
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 1.6e-11 73.6 44 75.0
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 1.6e-11 73.6 44 75.0
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 2.1e-11 73.2 45 73.3
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 2.8e-11 72.8 45 73.3
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 3.6e-11 72.4 43 72.1
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 3.6e-11 72.4 43 72.1
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 3.6e-11 72.4 44 72.7
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 3.6e-11 72.4 46 71.7
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 3.6e-11 72.4 46 76.1
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 6.2e-11 71.6 44 72.7
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 6.2e-11 71.6 46 67.4
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 6.2e-11 71.6 46 67.4
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 6.2e-11 71.6 46 67.4
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 1.1e-10 70.9 45 71.1
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 1.4e-10 70.5 45 71.1
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 1.8e-10 70.1 81 48.1
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 3.1e-10 69.3 43 69.8
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 4.0e-10 68.9 51 64.7
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 6.8e-10 68.2 57 50.9
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 8.9e-10 67.8 45 64.4
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 1.2e-09 67.4 47 57.4
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 2.6e-09 66.2 44 68.2
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 4.4e-09 65.5 42 64.3
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 4.4e-09 65.5 47 57.4
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 9.8e-09 64.3 42 66.7
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 9.8e-09 64.3 42 66.7
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 2.2e-08 63.2 42 59.5
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 2.9e-08 62.8 44 63.6
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 6.4e-08 61.6 37 73.0
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 3.2e-07 59.3 42 57.1
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 3.2e-07 59.3 42 57.1
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 5.4e-07 58.5 41 61.0
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.6e-06 57.0 42 57.1


User provided reference genes

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