Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 3.3e-84 315.1 166 100.0
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 6.4e-48 194.5 171 66.7
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.2e-46 190.3 171 64.9
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 2.4e-42 176.0 188 57.4
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 7.9e-38 161.0 166 57.2
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 2.7e-30 136.0 164 49.4
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 4.6e-30 135.2 161 50.3
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 3.0e-29 132.5 163 49.7
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.5e-28 130.2 161 47.2
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.5e-28 130.2 164 47.0
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.9e-28 129.8 158 48.7
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 3.3e-28 129.0 167 46.1
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 4.3e-28 128.6 149 52.3
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 5.7e-28 128.3 163 46.6
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 5.7e-28 128.3 160 48.1
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 9.6e-28 127.5 158 48.7
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-27 127.1 164 46.3
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.3e-27 127.1 165 46.1
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.3e-27 127.1 160 46.9
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 3.7e-27 125.6 163 48.5
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 8.2e-27 124.4 165 43.6
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 8.2e-27 124.4 166 47.0
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.1e-26 124.0 158 45.6
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.4e-26 122.9 159 45.9
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 3.1e-26 122.5 162 46.9
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 4.0e-26 122.1 162 43.2
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 5.3e-26 121.7 159 46.5
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 6.9e-26 121.3 167 44.3
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 9.0e-26 120.9 166 43.4
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.2e-25 120.6 167 43.1
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.2e-25 120.6 158 48.1
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.2e-25 120.6 165 43.0
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 1.5e-25 120.2 166 43.4
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-25 120.2 166 43.4
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 1.5e-25 120.2 166 43.4
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.5e-25 120.2 159 46.5
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 1.5e-25 120.2 166 44.0
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.0e-25 119.8 86 70.9
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.0e-25 119.8 162 45.7
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 1.0e-24 117.5 161 43.5
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 1.3e-24 117.1 164 45.1
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 1.3e-24 117.1 161 44.7
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 1.7e-24 116.7 166 42.8
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.7e-24 116.7 80 68.8
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.9e-24 115.9 159 45.3
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.8e-24 115.5 164 43.9
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 3.8e-24 115.5 161 44.7
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 3.8e-24 115.5 159 41.5
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 5.0e-24 115.2 161 42.2
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 8.4e-24 114.4 156 43.6
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.1e-23 114.0 167 41.3
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 1.4e-23 113.6 167 40.7
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-23 113.6 157 43.3
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 1.9e-23 113.2 167 43.1
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 2.5e-23 112.8 152 45.4
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 3.2e-23 112.5 161 42.9
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 3.2e-23 112.5 162 39.5
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 3.2e-23 112.5 162 39.5
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 3.2e-23 112.5 169 42.6
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 4.2e-23 112.1 161 43.5
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 9.3e-23 110.9 162 43.2
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 9.3e-23 110.9 76 69.7
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.2e-22 110.5 76 68.4
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 1.2e-22 110.5 167 44.3
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.6e-22 110.2 161 41.6
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.6e-22 110.2 157 43.9
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.6e-22 110.2 162 41.4
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 2.1e-22 109.8 167 41.9
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 2.1e-22 109.8 166 42.8
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 4.6e-22 108.6 162 40.7
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 6.1e-22 108.2 166 41.0
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 6.1e-22 108.2 162 40.7
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 6.1e-22 108.2 162 44.4
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 1.3e-21 107.1 155 42.6
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.3e-21 107.1 162 43.8
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 1.8e-21 106.7 155 42.6
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 2.3e-21 106.3 161 42.2
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 3.0e-21 105.9 168 42.3
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 3.0e-21 105.9 155 40.6
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 3.9e-21 105.5 76 65.8
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 3.9e-21 105.5 167 41.9
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 5.1e-21 105.1 158 41.1
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 6.7e-21 104.8 155 41.3
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 8.7e-21 104.4 167 40.7
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 8.7e-21 104.4 158 41.8
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.1e-20 104.0 157 40.1
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.5e-20 103.6 158 39.9
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 3.3e-20 102.4 159 40.3
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 3.3e-20 102.4 159 40.3
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 3.3e-20 102.4 159 40.3
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 3.3e-20 102.4 162 38.9
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 4.3e-20 102.1 167 41.3
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 5.7e-20 101.7 160 43.8
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 7.4e-20 101.3 159 42.8
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 7.4e-20 101.3 167 37.1
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 7.4e-20 101.3 167 39.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 7.4e-20 101.3 80 63.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 2.2e-19 99.8 76 65.8
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 2.8e-19 99.4 156 38.5
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 6.3e-19 98.2 158 39.2
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 8.2e-19 97.8 79 63.3
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.1e-18 95.9 158 38.6
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 4.2e-15 85.5 94 46.8
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 5.5e-15 85.1 94 45.7
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 1.2e-14 84.0 77 48.1
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 7.9e-14 81.3 149 36.2
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 1.4e-13 80.5 73 56.2
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 3.3e-12 75.9 94 44.7
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.3e-11 73.9 94 44.7
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 1.4e-10 70.5 94 42.6
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 3.8e-08 62.4 132 32.6
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 3.8e-08 62.4 132 32.6
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 1.9e-07 60.1 69 49.3
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 3.2e-07 59.3 146 32.2
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 2.7e-06 56.2 126 31.7
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 7.9e-06 54.7 38 63.2


User provided reference genes

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