Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 2.7e-117 425.6 258 100.0
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 1.7e-103 379.8 255 80.8
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 1.3e-79 300.4 253 74.7
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 5.3e-73 278.5 246 66.3
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 1.2e-72 277.3 251 68.1
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 1.2e-72 277.3 251 68.1
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 2.7e-69 266.2 257 69.3
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 2.5e-67 259.6 260 68.1
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 2.8e-66 256.1 259 66.0
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 1.2e-64 250.8 257 66.5
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 2.0e-64 250.0 256 63.3
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 1.4e-62 243.8 258 62.4
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 3.2e-62 242.7 257 59.9
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 7.1e-62 241.5 257 54.1
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.2e-61 240.7 258 52.7
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 4.6e-61 238.8 260 56.2
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 6.0e-61 238.4 259 60.2
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 1.0e-60 237.7 257 57.2
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.3e-60 237.3 257 57.2
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 1.3e-60 237.3 259 62.5
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 3.0e-60 236.1 258 53.9
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 3.9e-60 235.7 256 55.1
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 5.1e-60 235.3 251 59.0
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 1.1e-59 234.2 257 59.5
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 1.5e-59 233.8 256 62.1
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 3.3e-59 232.6 260 61.2
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.6e-58 230.3 260 56.5
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 2.1e-58 229.9 257 65.8
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 2.1e-58 229.9 257 52.1
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 2.8e-58 229.6 259 50.2
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 3.7e-58 229.2 226 69.0
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 1.8e-57 226.9 256 64.1
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 2.4e-57 226.5 263 49.8
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 3.1e-57 226.1 258 50.8
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 4.0e-57 225.7 257 59.9
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 4.0e-57 225.7 256 60.9
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 4.0e-57 225.7 256 63.7
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 6.9e-57 224.9 259 60.2
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 6.9e-57 224.9 259 60.2
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 1.2e-56 224.2 221 65.2
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 1.2e-56 224.2 258 51.2
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 1.5e-56 223.8 257 58.8
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 1.5e-56 223.8 259 59.1
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 2.0e-56 223.4 257 59.9
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 2.0e-56 223.4 257 58.8
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 2.6e-56 223.0 257 59.5
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 2.6e-56 223.0 257 59.5
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 5.8e-56 221.9 261 49.4
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 1.3e-55 220.7 277 48.7
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 1.7e-55 220.3 252 57.1
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 1.7e-55 220.3 240 50.4
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 2.2e-55 219.9 256 50.8
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 2.2e-55 219.9 259 59.8
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 2.9e-55 219.5 262 57.6
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 3.8e-55 219.2 254 59.4
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 1.1e-54 217.6 216 67.1
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 1.4e-54 217.2 258 49.6
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 1.9e-54 216.9 220 62.3
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 2.5e-54 216.5 237 51.1
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 4.2e-54 215.7 252 61.1
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 4.2e-54 215.7 258 54.3
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 5.5e-54 215.3 258 51.2
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 7.1e-54 214.9 228 63.6
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 9.3e-54 214.5 258 48.4
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.5e-53 212.6 266 47.0
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 3.5e-53 212.6 257 58.4
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 3.9e-52 209.1 257 47.1
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.1e-51 207.6 258 48.1
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 1.5e-51 207.2 256 57.8
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 5.7e-51 205.3 227 63.0
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.3e-50 204.1 259 47.5
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 1.3e-50 204.1 258 57.8
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 1.3e-50 204.1 259 57.1
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 1.6e-50 203.8 262 55.3
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 1.6e-50 203.8 261 57.9
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 4.8e-50 202.2 257 56.0
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 4.8e-50 202.2 261 57.5
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 8.2e-50 201.4 263 47.9
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 8.2e-50 201.4 252 58.7
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 1.4e-49 200.7 264 54.5
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 9.0e-49 198.0 256 59.4
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 9.0e-49 198.0 224 62.9
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 9.0e-49 198.0 225 61.8
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 2.0e-48 196.8 255 55.3
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 4.5e-48 195.7 247 48.6
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 5.9e-48 195.3 252 55.2
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 6.5e-47 191.8 263 45.2
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 3.2e-46 189.5 239 49.4
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 4.2e-46 189.1 276 54.0
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 1.2e-45 187.6 257 53.3
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 2.7e-45 186.4 261 52.5
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 1.0e-44 184.5 259 45.6
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 1.0e-44 184.5 259 54.4
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 3.0e-44 183.0 259 52.9
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 5.1e-44 182.2 227 59.9
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 6.7e-44 181.8 272 52.9
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 6.7e-44 181.8 260 51.5
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 5.7e-43 178.7 261 52.1
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 9.7e-43 177.9 216 48.1
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 2.8e-42 176.4 224 56.2
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 6.3e-42 175.3 251 49.8
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 8.2e-42 174.9 251 49.4
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 2.4e-41 173.3 259 43.6
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 2.4e-41 173.3 273 51.6
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 3.1e-41 172.9 243 55.1
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 4.1e-41 172.6 264 50.4
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 4.1e-41 172.6 235 51.1
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 1.5e-40 170.6 261 54.0
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.3e-39 167.5 213 47.9
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 2.9e-39 166.4 233 51.1
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 4.2e-38 162.5 148 58.1
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 5.5e-38 162.2 129 60.5
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 1.2e-37 161.0 216 46.3
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 4.6e-37 159.1 144 54.2
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 1.1e-35 154.5 149 54.4
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 9.7e-35 151.4 130 57.7
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 3.1e-33 146.4 195 51.8
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 3.4e-32 142.9 237 50.2
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 7.7e-32 141.7 192 54.7
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 9.1e-25 118.2 145 44.1
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 1.2e-21 107.8 110 52.7
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 3.3e-19 99.8 81 61.7
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 4.8e-18 95.9 82 61.0
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 8.2e-18 95.1 223 26.0
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 2.7e-16 90.1 210 28.6
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 3.5e-16 89.7 81 58.0
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 1.7e-15 87.4 216 27.3
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.7e-15 87.4 201 27.4
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 4.7e-13 79.3 83 51.8
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 3.0e-12 76.6 181 27.1
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 3.4e-11 73.2 78 53.8
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 3.4e-11 73.2 203 26.1
Ah.07g199780 Amaranthus hybridus HOM05D005866 ORTHO05D007078 3.7e-10 69.7 80 46.2
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 7.7e-08 62.0 62 53.2
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 2.2e-07 60.5 239 22.6
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 8.5e-07 58.5 251 23.5


User provided reference genes

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