Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 3.6e-62 241.5 130 100.0
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.4e-60 234.6 130 97.7
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.0e-54 213.8 130 90.0
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.0e-53 211.5 130 86.9
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.0e-53 211.5 130 86.9
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 6.8e-53 210.7 130 84.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 2.0e-52 209.1 130 84.6
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.0e-52 209.1 130 86.2
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.6e-52 208.8 128 85.2
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.4e-52 208.0 128 86.7
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 4.4e-52 208.0 130 84.6
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 83.6
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 4.9e-51 204.5 128 82.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 4.9e-51 204.5 128 83.6
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 8.3e-51 203.8 130 82.3
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.1e-50 203.4 130 83.8
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 82.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 82.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 1.8e-50 202.6 130 83.8
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.1e-50 201.8 128 83.6
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 3.1e-50 201.8 130 83.1
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 4.1e-50 201.4 126 83.3
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 4.1e-50 201.4 126 83.3
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 82.0
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 5.4e-50 201.1 130 80.8
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 5.4e-50 201.1 130 81.5
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 83.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 82.0
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 9.2e-50 200.3 130 82.3
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 80.0
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 82.0
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 82.0
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.8
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.0
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 3.5e-49 198.4 128 82.8
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 7.8e-49 197.2 128 79.7
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 7.8e-49 197.2 130 81.5
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 7.8e-49 197.2 127 81.1
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.0e-48 196.8 130 79.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 80.5
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.0e-48 196.8 130 79.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 79.2
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 80.5
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 82.0
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 82.0
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 79.2
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.9e-48 195.3 128 79.7
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 79.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.9e-48 195.3 128 79.7
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 78.5
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 80.0
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 6.6e-48 194.1 122 82.0
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 80.0
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.1e-47 193.4 128 78.9
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 77.7
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 79.2
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 78.1
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 76.9
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 2.5e-47 192.2 126 79.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 3.3e-47 191.8 127 78.0
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.3e-47 191.4 128 78.1
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 76.9
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.6e-47 191.0 130 76.9
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 5.6e-47 191.0 128 77.3
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 7.3e-47 190.7 130 76.2
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.2e-46 189.9 134 78.4
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.1e-46 189.1 125 80.0
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 2.8e-46 188.7 130 73.1
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 6.1e-46 187.6 127 77.2
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 6.1e-46 187.6 130 80.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 8.0e-46 187.2 130 77.7
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 77.3
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 75.0
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.0e-45 184.9 132 75.8
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 6.8e-45 184.1 128 74.2
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.2e-44 183.3 119 80.7
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 2.6e-44 182.2 126 74.6
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.6e-44 182.2 127 77.2
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.4e-44 181.8 120 79.2
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 4.4e-44 181.4 122 81.1
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.9e-43 178.7 121 78.5
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.9e-42 176.0 112 83.0
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.9e-42 176.0 128 75.0
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 5.4e-42 174.5 128 74.2
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 7.0e-42 174.1 131 74.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 6.0e-41 171.0 136 67.6
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 1.0e-40 170.2 119 76.5
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 8.6e-40 167.2 171 57.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 4.3e-39 164.9 128 70.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 7.3e-39 164.1 128 69.5
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 7.3e-39 164.1 128 69.5
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 2.8e-38 162.2 124 74.2
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 6.2e-38 161.0 103 83.5
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.0e-36 156.0 128 63.3
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.6e-36 155.6 104 77.9
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 7.5e-36 154.1 103 77.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.2e-35 152.5 116 70.7
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 2.9e-35 152.1 185 53.5
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 2.9e-35 152.1 128 60.9
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.6e-33 146.4 96 77.1
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 2.7e-33 145.6 98 76.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 3.0e-32 142.1 101 77.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 7.3e-31 137.5 92 78.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.1e-26 123.6 120 53.3
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.4e-26 122.5 92 69.6
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.6e-25 119.8 94 68.1
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 2.7e-25 119.0 99 57.6
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.6e-24 114.4 72 77.8
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 2.5e-23 112.5 92 66.3
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.6e-22 109.8 93 64.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.1e-21 107.1 104 61.5
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.1e-21 105.5 66 83.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 3.4e-20 102.1 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.7e-19 99.8 62 80.6
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.9e-18 96.3 62 77.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 7.1e-18 94.4 62 75.8
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 2.7e-17 92.4 62 72.6
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 3.9e-16 88.6 64 73.4
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.5e-15 86.7 57 84.2
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.5e-15 85.9 64 70.3
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.2e-11 72.8 117 33.3
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.1e-10 70.5 115 33.9
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.7e-09 65.9 61 50.8
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 4.3e-07 58.5 42 73.8
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 4.3e-07 58.5 56 66.1
Cre09.g405400 Chlamydomonas reinhardtii HOM05D006291 ORTHO05D007669 7.3e-07 57.8 121 28.1


User provided reference genes

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