Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 1.8e-228 795.8 476 100.0
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 1.7e-114 417.2 482 64.7
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 2.8e-56 223.8 488 45.9
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 9.1e-55 218.8 484 43.2
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 9.1e-55 218.8 490 43.5
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 5.9e-54 216.1 471 45.0
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.7e-53 214.5 506 43.7
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 1.7e-53 214.5 509 40.5
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 3.2e-52 210.3 483 39.5
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 4.2e-52 209.9 462 46.3
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 2.1e-51 207.6 506 39.3
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 2.7e-51 207.2 393 47.8
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 1.4e-50 204.9 521 41.3
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.4e-50 204.9 482 41.1
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 3.0e-50 203.8 523 37.5
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 5.2e-50 203.0 492 40.4
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 7.5e-49 199.1 483 42.4
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 7.5e-49 199.1 492 40.7
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.2e-48 197.6 488 38.7
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 6.3e-48 196.1 521 39.2
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 2.4e-47 194.1 503 41.2
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 2.4e-47 194.1 480 39.6
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 7.7e-46 189.1 346 46.8
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 1.0e-45 188.7 387 43.4
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 1.0e-45 188.7 369 43.6
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.9e-45 187.2 511 38.9
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 2.9e-45 187.2 405 40.0
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 2.9e-45 187.2 405 40.0
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 3.8e-45 186.8 510 40.0
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 6.5e-45 186.0 412 42.0
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 1.5e-44 184.9 372 44.9
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 2.5e-44 184.1 504 37.7
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 2.5e-44 184.1 526 38.0
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 4.2e-44 183.3 383 42.6
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 5.5e-44 183.0 472 40.0
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 9.5e-44 182.2 494 38.7
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 9.5e-44 182.2 404 40.1
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 1.2e-43 181.8 394 42.4
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 2.8e-43 180.6 531 38.8
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 3.6e-43 180.3 384 44.3
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 4.7e-43 179.9 487 39.0
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 6.1e-43 179.5 479 38.4
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 6.1e-43 179.5 378 44.4
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 1.4e-42 178.3 484 39.5
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 1.4e-42 178.3 388 43.0
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 2.3e-42 177.6 385 40.5
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 4.0e-42 176.8 324 40.7
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 5.2e-42 176.4 509 37.5
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 5.2e-42 176.4 509 37.5
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 6.8e-42 176.0 486 38.9
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 8.9e-42 175.6 380 40.8
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 8.9e-42 175.6 463 40.8
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 1.2e-41 175.3 539 37.8
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 1.2e-41 175.3 401 41.1
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 2.6e-41 174.1 563 36.1
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 3.4e-41 173.7 379 43.5
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 4.4e-41 173.3 379 42.5
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 5.7e-41 172.9 389 40.9
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 9.8e-41 172.2 538 36.2
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 1.3e-40 171.8 371 40.4
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 2.2e-40 171.0 401 38.2
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 8.3e-40 169.1 483 37.5
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.8e-39 167.9 498 37.8
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 4.1e-39 166.8 410 36.6
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 1.6e-38 164.9 477 36.9
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 1.6e-38 164.9 516 38.0
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 3.5e-38 163.7 491 38.3
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.9e-38 162.9 381 40.7
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 1.3e-37 161.8 491 38.3
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 2.3e-37 161.0 497 37.4
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 3.8e-37 160.2 485 38.8
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.0e-37 159.8 393 39.4
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 8.6e-37 159.1 475 39.6
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.5e-36 158.3 528 34.1
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.5e-36 158.3 371 43.7
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 2.5e-36 157.5 375 38.9
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 3.3e-36 157.1 573 35.1
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 4.3e-36 156.8 379 42.2
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 1.0e-34 152.1 489 39.3
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 1.8e-34 151.4 487 38.0
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 2.3e-34 151.0 317 36.6
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 7.5e-33 146.0 382 39.5
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 9.8e-33 145.6 490 36.3
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 1.7e-32 144.8 406 36.0
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 1.1e-31 142.1 383 39.7
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 1.8e-31 141.4 375 36.5
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 3.2e-31 140.6 376 38.3
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.2e-30 138.7 179 45.3
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 4.6e-30 136.7 391 37.6
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 7.8e-30 136.0 397 32.5
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 7.3e-28 129.4 181 43.6
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 1.6e-27 128.3 186 44.1
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 3.6e-27 127.1 178 43.3
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 3.1e-26 124.0 179 43.0
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 5.2e-26 123.2 254 39.4
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 8.9e-26 122.5 174 44.3
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 4.4e-25 120.2 237 44.7
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 3.7e-24 117.1 183 42.1
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 8.3e-24 115.9 377 37.7
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 9.2e-23 112.5 182 39.6
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 9.2e-23 112.5 436 32.6
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 1.6e-22 111.7 514 30.2
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 2.7e-22 110.9 363 38.3
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 3.6e-19 100.5 377 28.6
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 8.1e-19 99.4 249 43.4
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 8.1e-19 99.4 56 78.6
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 3.1e-18 97.4 151 41.7
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 1.5e-17 95.1 542 31.9
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 2.0e-17 94.7 55 78.2
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 3.4e-17 94.0 500 29.4
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 1.4e-15 88.6 54 75.9
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 1.9e-15 88.2 67 62.7
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 7.1e-15 86.3 53 77.4
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 1.3e-13 82.0 338 28.7
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 3.0e-13 80.9 544 27.2
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 3.9e-13 80.5 60 65.0
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 1.1e-12 79.0 46 76.1
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 1.5e-12 78.6 55 70.9
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 2.0e-09 68.2 54 68.5
Sabra15G0097000 Salix brachista HOM05D002487 ORTHO05D002748 1.1e-07 62.4 109 44.0
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 4.6e-06 57.0 52 50.0


User provided reference genes

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